DR908453

Overview
NameDR908453
Unique NameDR908453
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length638
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908453 vs. ExPASy Swiss-Prot
Match: RA212_ARATH (Ethylene-responsive transcription factor RAP2-12 OS=Arabidopsis thaliana GN=RAP2-12 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.860e-11
Identity = 33/59 (55.93%), Postives = 37/59 (62.71%), Query Frame = 1
Query:  430 QYRGVRQRHWGKWVAEIRDPTK-ARVWLGTFDTXXXXXXXXXXXXXRFYGCNAKLNFPE 603
            QYRG+RQR WGKW AEIRDP + AR+WLGTF T             R  G  AK+NFPE
Sbjct:  124 QYRGIRQRPWGKWAAEIRDPREGARIWLGTFKTAEEAARAYDAAARRIRGSKAKVNFPE 182          
BLAST of DR908453 vs. ExPASy Swiss-Prot
Match: EF101_ARATH (Ethylene-responsive transcription factor 2 OS=Arabidopsis thaliana GN=ERF2 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.429e-11
Identity = 38/71 (53.52%), Postives = 41/71 (57.75%), Query Frame = 1
Query:  409 EGNVGIKQYRGVRQRHWGKWVAEIRDPTK--ARVWLGTFDTXXXXXXXXXXXXXRFYGCNAKLNFPERVQA 615
            E  V  K YRGVRQR WGK+ AEIRDP K  ARVWLGTF+T             R  G  A LNFP RV +
Sbjct:  109 ETAVKAKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDIAAFRMRGSRALLNFPLRVNS 179          
BLAST of DR908453 vs. ExPASy Swiss-Prot
Match: ERF57_ARATH (Ethylene-responsive transcription factor ERF057 OS=Arabidopsis thaliana GN=ERF057 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.144e-11
Identity = 33/64 (51.56%), Postives = 41/64 (64.06%), Query Frame = 1
Query:  424 IKQYRGVRQRHWGKWVAEIRDP-TKARVWLGTFDTXXXXXXXXXXXXXRFYGCNAKLNFPERVQ 612
            +K YRGVRQR WGKWVAEIR P  + R+WLGTF+T             +  G NA+LNFP+ V+
Sbjct:  108 VKLYRGVRQRQWGKWVAEIRLPKNRTRLWLGTFETAQEAALAYDQAAHKIRGDNARLNFPDIVR 171          
BLAST of DR908453 vs. ExPASy Swiss-Prot
Match: ERF55_ARATH (Ethylene-responsive transcription factor ERF055 OS=Arabidopsis thaliana GN=ERF055 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.144e-11
Identity = 33/59 (55.93%), Postives = 38/59 (64.41%), Query Frame = 1
Query:  427 KQYRGVRQRHWGKWVAEIRDP-TKARVWLGTFDTXXXXXXXXXXXXXRFYGCNAKLNFP 600
            K YRGVRQRHWGKWVAEIR P  + R+WLGTFDT             +  G +A+LNFP
Sbjct:  141 KLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALAYDRAAFKLRGDSARLNFP 199          
BLAST of DR908453 vs. ExPASy Swiss-Prot
Match: EF100_ARATH (Ethylene-responsive transcription factor 1A OS=Arabidopsis thaliana GN=ERF1A PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 4.144e-11
Identity = 36/65 (55.38%), Postives = 39/65 (60.00%), Query Frame = 1
Query:  427 KQYRGVRQRHWGKWVAEIRDPTK--ARVWLGTFDTXXXXXXXXXXXXXRFYGCNAKLNFPERVQA 615
            K YRGVRQR WGK+ AEIRDP K  ARVWLGTF+T             R  G  A LNFP RV +
Sbjct:  146 KHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNFPLRVNS 210          
BLAST of DR908453 vs. ExPASy Swiss-Prot
Match: DRE2D_ARATH (Dehydration-responsive element-binding protein 2D OS=Arabidopsis thaliana GN=DREB2D PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.144e-11
Identity = 32/62 (51.61%), Postives = 40/62 (64.52%), Query Frame = 1
Query:  433 YRGVRQRHWGKWVAEIRDPTK-ARVWLGTFDTXXXXXXXXXXXXXRFYGCNAKLNFPERVQA 615
            Y+GVRQR WGKWVAEIR+P + AR+WLGTFDT             + YG  A LN PE +++
Sbjct:   42 YKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSREAALAYDSAARKLYGPEAHLNLPESLRS 103          
BLAST of DR908453 vs. ExPASy Swiss-Prot
Match: CRF1_ARATH (Ethylene-responsive transcription factor CRF1 OS=Arabidopsis thaliana GN=CRF1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.412e-11
Identity = 32/59 (54.24%), Postives = 39/59 (66.10%), Query Frame = 1
Query:  427 KQYRGVRQRHWGKWVAEIRDPT-KARVWLGTFDTXXXXXXXXXXXXXRFYGCNAKLNFP 600
            +++RGVRQR WGKW AEIRDP+ + RVWLGTFDT             +  G NA+LNFP
Sbjct:   85 RKFRGVRQRPWGKWAAEIRDPSRRVRVWLGTFDTAEEAAIVYDNAAIQLRGPNAELNFP 143          
BLAST of DR908453 vs. ExPASy Swiss-Prot
Match: ERF58_ARATH (Ethylene-responsive transcription factor ERF058 OS=Arabidopsis thaliana GN=ERF058 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.068e-11
Identity = 33/60 (55.00%), Postives = 38/60 (63.33%), Query Frame = 1
Query:  427 KQYRGVRQRHWGKWVAEIRDP-TKARVWLGTFDTXXXXXXXXXXXXXRFYGCNAKLNFPE 603
            K YRGVRQRHWGKWVAEIR P  + R+WLGTFDT             +  G  A+LNFP+
Sbjct:   81 KLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFPD 140          
BLAST of DR908453 vs. ExPASy Swiss-Prot
Match: ERF2_TOBAC (Ethylene-responsive transcription factor 2 OS=Nicotiana tabacum GN=ERF2 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.068e-11
Identity = 34/66 (51.52%), Postives = 39/66 (59.09%), Query Frame = 1
Query:  427 KQYRGVRQRHWGKWVAEIRDPTK--ARVWLGTFDTXXXXXXXXXXXXXRFYGCNAKLNFPERVQAN 618
            + YRGVRQR WGK+ AEIRDP K  ARVWLGT++T             R  G  A LNFP R+  N
Sbjct:   97 RHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEEAALAYDKAAYRMRGSKALLNFPHRIGLN 162          
BLAST of DR908453 vs. ExPASy Swiss-Prot
Match: ERF2_NICSY (Ethylene-responsive transcription factor 2 OS=Nicotiana sylvestris GN=ERF2 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.068e-11
Identity = 34/66 (51.52%), Postives = 39/66 (59.09%), Query Frame = 1
Query:  427 KQYRGVRQRHWGKWVAEIRDPTK--ARVWLGTFDTXXXXXXXXXXXXXRFYGCNAKLNFPERVQAN 618
            + YRGVRQR WGK+ AEIRDP K  ARVWLGT++T             R  G  A LNFP R+  N
Sbjct:  101 RHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEEAALAYDKAAYRMRGSKALLNFPHRIGLN 166          
The following BLAST results are available for this feature:
BLAST of DR908453 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
RA212_ARATH1.860e-1155.93Ethylene-responsive transcription factor RAP2-12 O... [more]
EF101_ARATH2.429e-1153.52Ethylene-responsive transcription factor 2 OS=Arab... [more]
ERF57_ARATH4.144e-1151.56Ethylene-responsive transcription factor ERF057 OS... [more]
ERF55_ARATH4.144e-1155.93Ethylene-responsive transcription factor ERF055 OS... [more]
EF100_ARATH4.144e-1155.38Ethylene-responsive transcription factor 1A OS=Ara... [more]
DRE2D_ARATH4.144e-1151.61Dehydration-responsive element-binding protein 2D ... [more]
CRF1_ARATH5.412e-1154.24Ethylene-responsive transcription factor CRF1 OS=A... [more]
ERF58_ARATH7.068e-1155.00Ethylene-responsive transcription factor ERF058 OS... [more]
ERF2_TOBAC7.068e-1151.52Ethylene-responsive transcription factor 2 OS=Nico... [more]
ERF2_NICSY7.068e-1151.52Ethylene-responsive transcription factor 2 OS=Nico... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16581 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-56_A11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908453 ID=DR908453; Name=DR908453; organism=Citrus sinensis; type=EST; length=638bp
GTGCACCGTCAATGCTTGTTGGCACCTCTGCCCCCACGAATCAGCCAGAC
TCTAGCCTAATGAATCTACCACAGTACAGCGGAATGGATCCCAGTAATAG
TACTTCCTCCCCAGTATCACAGTTTAGTGGAGCGCAACCACAGCTTGAGA
ATCAGTATAAACGTCTTCGGGTAGAATCACTGTCTACCATAGACTATACA
CCACATGCACTAGCTTCTGATAACCTGAATAGGAGTTCTCTGGCTACACA
GCATGGACCAGGTGTGGATCGCATTGGAGGGCAAACACAGTTTGGTCTTT
TAGCAGAGCTGATGGTGAATCATCAAATAGCAAGCAGGAGAATGATCGGA
GTTTTCTCCTATTGAGTTGTTTCTTTAATAAACACACTAAACATGTGCTA
TATACTGTGAAGGGAATGTGGGGATAAAGCAGTACAGAGGAGTGAGGCAA
AGGCACTGGGGCAAATGGGTAGCTGAGATTCGTGATCCAACGAAGGCTCG
TGTATGGCTAGGAACTTTTGATACAGCTGAAGCAGCAGCACTTGCTTACG
ATGAAGCAGCTCTTAGGTTCTACGGATGCAATGCCAAGCTTAACTTCCCA
GAAAGGGTTCAAGCTAATCTCACAACTCACCTTTCATT
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