DR908444

Overview
NameDR908444
Unique NameDR908444
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length639
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908444 vs. ExPASy Swiss-Prot
Match: 1433G_SHEEP (14-3-3 protein gamma (Fragments) OS=Ovis aries GN=YWHAG PE=1 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 7.003e-43
Identity = 99/201 (49.25%), Postives = 118/201 (58.71%), Query Frame = 3
Query:   21 LTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQE 623
            L+ EERNLLSVAYKNV+G+ R++WR+ISSIEQK                                                  FYLKMKGDYYRYLAE   G++R    E++  +Y  A +I+   + PTHPIRLGLALN+SVFYYEI             AF++AIAELDTL E+SYKDSTLIMQLLRDNLTLWTSD Q+
Sbjct:   14 LSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTS------------------------------------------------FYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEI------------TAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQD 154          
BLAST of DR908444 vs. ExPASy Swiss-Prot
Match: 14338_ORYSJ (Putative 14-3-3-like protein GF14-H OS=Oryza sativa subsp. japonica GN=GF14H PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.460e-40
Identity = 87/200 (43.50%), Postives = 125/200 (62.50%), Query Frame = 3
Query:   18 ELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDM 617
            +++ EER L SV +K  IG+ RA+WRI+ S+EQK      ++    +  Y+ KVE EL  VC  +L ++  H +P A +GE+ VF+ KMKGDYYRYLAEF  G E+KAA + ++++Y+A     L  L                   EI+NS E+A  +AKQA +EA AE+++ G E YKDS L+MQLL++NL LWTS++
Sbjct:   36 DMSAEERLLFSVGFKKTIGARRASWRILESLEQKVTA--GDQPGVTINGYKKKVEDELRAVCNEVLSIIAIHCLPLANSGENVVFFYKMKGDYYRYLAEFSTGTEKKAATDQSLMAYQAWPCAQLFSL------------------LEIMNSPERASQVAKQALDEATAEINSAGVEGYKDSMLMMQLLKENLALWTSEL 215          
BLAST of DR908444 vs. ExPASy Swiss-Prot
Match: 1433X_MAIZE (14-3-3-like protein (Fragment) OS=Zea mays PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 7.797e-18
Identity = 43/54 (79.63%), Postives = 49/54 (90.74%), Query Frame = 3
Query:  462 ILNSSEKACTMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQE 623
            ILNS ++AC +AKQAF+EAI+ELD+LGEESYKDSTLIMQLL DNLTLWTSD  E
Sbjct:    1 ILNSPDRACNLAKQAFDEAISELDSLGEESYKDSTLIMQLLXDNLTLWTSDTNE 54          
The following BLAST results are available for this feature:
BLAST of DR908444 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
1433G_SHEEP7.003e-4349.2514-3-3 protein gamma (Fragments) OS=Ovis aries GN=... [more]
14338_ORYSJ1.460e-4043.50Putative 14-3-3-like protein GF14-H OS=Oryza sativ... [more]
1433X_MAIZE7.797e-1879.6314-3-3-like protein (Fragment) OS=Zea mays PE=3 SV... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16572 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-32_B03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908444 ID=DR908444; Name=DR908444; organism=Citrus sinensis; type=EST; length=639bp
CCTCCACTCCGGCGACTGAACTCACCGTCGAGGAGCGCAACCTCCTCTCC
GTTGCTTACAAGAACGTCATCGGCTCTCTTCGCGCCGCGTGGCGTATTAT
CTCCTCTATCGAGCAGAAAGAGGAAGGCCGCAAGAACGAGGAACACGTCT
CGCTGGTCAAAGACTATCGGTCAAAGGTAGAGTCTGAGTTATCTGACGTG
TGCGGGAGCATATTGAAGTTGCTGGACTCGCACCTTGTGCCTTCGGCTAC
TGCTGGTGAGTCCAAAGTCTTCTATTTGAAGATGAAGGGAGATTACTACC
GTTACTTGGCGGAGTTTAAAGTTGGTGATGAGAGGAAGGCCGCCGCTGAA
AACACTATGTTGTCTTATAAGGCGGCTCAGGATATTGCACTGACTGATCT
GGCGCCAACACACCCTATAAGGTTGGGGCTGGCACTCAACTTCTCAGTGT
TTTACTATGAGATTCTCAATTCATCAGAGAAAGCTTGTACCATGGCCAAA
CAGGCCTTTGAGGAGGCCATTGCTGAGCTGGACACTTTGGGTGAAGAATC
CTACAAGGATAGCACTCTTATCATGCAATTGCTAAGAGACAACCTCACTC
TGTGGACCTCAGATATGCAGGAGCAGATAGATGAGGCAT
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