EY659575
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY659575 vs. ExPASy Swiss-Prot
Match: CB21_EUGGR (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Euglena gracilis PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.054e-16 Identity = 46/98 (46.94%), Postives = 61/98 (62.24%), Query Frame = 2 Query: 8 SITTLIWIEVLVIGYIEFQRNSELDPEK------RLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAVVTGKGPLNNWATHLSDP 283 S+ ++ +VL++G +E R P + RLYPGG F DPLGLA DP+ L++ EIK+ RLAM LGF QA+VTG+GP+ NW HL DP Sbjct: 10 SLLAILATQVLLMGAVEGYRAGNTAPGQFGEDLDRLYPGGPF-DPLGLADDPDTFPELKVKEIKNGRLAMSGMLGFYAQAIVTGEGPVENWLYHLQDP 106
BLAST of EY659575 vs. ExPASy Swiss-Prot
Match: CB2F_SOLLC (Chlorophyll a-b binding protein 3B, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB3B PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.377e-16 Identity = 49/96 (51.04%), Postives = 64/96 (66.67%), Query Frame = 2 Query: 23 IWI-EVLVIGYIEFQR------NSELDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAVVTGKGPLNNWATHLSDPLH 289 IW +V+++G +E R +DP LYPGG F DPLGLA DPE A L++ EIK+ RLAM + GF VQA+VTGKGPL N A H++DP++ Sbjct: 162 IWACQVVLMGAVEGYRIAGGPLGEVVDP---LYPGGSF-DPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVN 253
BLAST of EY659575 vs. ExPASy Swiss-Prot
Match: CB2E_SOLLC (Chlorophyll a-b binding protein 3A, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB3A PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.377e-16 Identity = 49/96 (51.04%), Postives = 64/96 (66.67%), Query Frame = 2 Query: 23 IWI-EVLVIGYIEFQR------NSELDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAVVTGKGPLNNWATHLSDPLH 289 IW +V+++G +E R +DP LYPGG F DPLGLA DPE A L++ EIK+ RLAM + GF VQA+VTGKGPL N A H++DP++ Sbjct: 162 IWACQVVLMGAVEGYRIAGGPLGEVVDP---LYPGGSF-DPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVN 253
BLAST of EY659575 vs. ExPASy Swiss-Prot
Match: CB25_NICPL (Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia GN=CABE PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.377e-16 Identity = 50/96 (52.08%), Postives = 64/96 (66.67%), Query Frame = 2 Query: 23 IWI-EVLVIGYIEFQR------NSELDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAVVTGKGPLNNWATHLSDPLH 289 IW +V+++G +E R +DP LYPGG F DPLGLA DPE A L++ EIK+ RLAM + GF VQA+VTGKGPL N A HL+DP++ Sbjct: 161 IWACQVVLMGAVEGYRVAGEPLGEVVDP---LYPGGSF-DPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQALVTGKGPLENLADHLADPVN 252
BLAST of EY659575 vs. ExPASy Swiss-Prot
Match: CB22_PEA (Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum sativum GN=AB80 PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.377e-16 Identity = 49/96 (51.04%), Postives = 64/96 (66.67%), Query Frame = 2 Query: 23 IWI-EVLVIGYIEFQR------NSELDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAVVTGKGPLNNWATHLSDPLH 289 IW +V+++G +E R +DP LYPGG F DPLGLA DPE A L++ E+K+ RLAM + GF VQA+VTGKGPL N A HL+DP++ Sbjct: 164 IWATQVILMGAVEGYRIAGGPLGEVVDP---LYPGGSF-DPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 255
BLAST of EY659575 vs. ExPASy Swiss-Prot
Match: CB21_LEMGI (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Lemna gibba PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.377e-16 Identity = 50/95 (52.63%), Postives = 63/95 (66.32%), Query Frame = 2 Query: 23 IWI-EVLVIGYIEFQR------NSELDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAVVTGKGPLNNWATHLSDPL 286 IW +V+++G IE R LDP LYPGG F DPLGLA DPE A L++ EIK+ RLAM + GF VQA+VTGKGP+ N A H++DP+ Sbjct: 159 IWATQVVLMGLIEGYRVGGGPLGEGLDP---LYPGGAF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHIADPV 249
BLAST of EY659575 vs. ExPASy Swiss-Prot
Match: CB2_DUNTE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella tertiolecta PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.798e-16 Identity = 50/97 (51.55%), Postives = 64/97 (65.98%), Query Frame = 2 Query: 8 SITTLIWIEVLVIGYIEFQR---NSE--LDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAVVTGKGPLNNWATHLSDP 283 SI + ++V+++G E R SE LD LYPGG F DPLGLA DP+ A L++ EIK+ RLAM + LGF VQA+VTGKGP+ N HL+DP Sbjct: 142 SIIATLAVQVVLMGLAEAYRANGGSEGFLDDLDTLYPGGPF-DPLGLADDPDTFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKGPVQNLTDHLADP 237
BLAST of EY659575 vs. ExPASy Swiss-Prot
Match: CB2B_PINSY (Chlorophyll a-b binding protein type 2 member 1B, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 3.068e-16 Identity = 48/96 (50.00%), Postives = 63/96 (65.62%), Query Frame = 2 Query: 23 IWI-EVLVIGYIEFQR------NSELDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAVVTGKGPLNNWATHLSDPLH 289 IW +V+++G +E R DP +YPGG F DPLGLA DPE A L++ EIK+ RLAM + GF VQA+VTGKGP+ N A HL+DP++ Sbjct: 169 IWACQVILMGAVEGYRIAGGPLGEVTDP---IYPGGSF-DPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVN 260
BLAST of EY659575 vs. ExPASy Swiss-Prot
Match: CB27_TOBAC (Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 3.068e-16 Identity = 50/96 (52.08%), Postives = 63/96 (65.62%), Query Frame = 2 Query: 23 IWI-EVLVIGYIEFQR------NSELDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAVVTGKGPLNNWATHLSDPLH 289 IW +V+++G IE R DP LYPGG F DPLGLA DPE A L++ EIK+ RLAM + GF VQA+VTGKGPL+N HL+DP++ Sbjct: 162 IWACQVVLMGAIEGYRVAGGPLGEVTDP---LYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLDNLVDHLADPVN 253
BLAST of EY659575 vs. ExPASy Swiss-Prot
Match: CB25_TOBAC (Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 3.068e-16 Identity = 49/96 (51.04%), Postives = 63/96 (65.62%), Query Frame = 2 Query: 23 IWI-EVLVIGYIEFQR------NSELDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAVVTGKGPLNNWATHLSDPLH 289 IW +V+++G +E R +DP LYPGG F DPLGLA DPE A L++ IK+ RLAM + GF VQA+VTGKGPL N A HL+DP++ Sbjct: 162 IWACQVVLMGAVEGYRVAGGPLGEVVDP---LYPGGSF-DPLGLAEDPEAFAELKVKHIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 253 The following BLAST results are available for this feature:
BLAST of EY659575 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659575 ID=EY659575; Name=EY659575; organism=Citrus sinensis; type=EST; length=489bpback to top |