EY659575
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY659575 vs. ExPASy Swiss-Prot
Match: CB22_SOYBN (Chlorophyll a-b binding protein 2, chloroplastic OS=Glycine max GN=CAB2 PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 3.068e-16 Identity = 48/96 (50.00%), Postives = 63/96 (65.62%), Query Frame = 2 Query: 23 IWI-EVLVIGYIEFQR------NSELDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAVVTGKGPLNNWATHLSDPLH 289 IW +V+++G +E R DP +YPGG F DPLGLA DPE A L++ E+K+ RLAM + GF VQA+VTGKGPL N A HL+DP++ Sbjct: 151 IWATQVILMGAVEGYRIAGGPLGEVTDP---IYPGGSF-DPLGLADDPEALAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 242
BLAST of EY659575 vs. ExPASy Swiss-Prot
Match: CB22_PINSY (Chlorophyll a-b binding protein type 2 member 2 (Fragment) OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 3.068e-16 Identity = 50/95 (52.63%), Postives = 62/95 (65.26%), Query Frame = 2 Query: 23 IWI-EVLVIGYIEFQR------NSELDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAVVTGKGPLNNWATHLSDPL 286 IW +V+++G IE R LDP LYPG F DPLGLA DPE KA L++ EIK+ RLAM + GF VQA+VTGKGP+ N HL+DP+ Sbjct: 45 IWACQVVLMGLIEGYRVGGGPLGEGLDP---LYPGDAF-DPLGLADDPEAKAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPV 135
BLAST of EY659575 vs. ExPASy Swiss-Prot
Match: CB21_MAIZE (Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 3.068e-16 Identity = 48/96 (50.00%), Postives = 64/96 (66.67%), Query Frame = 2 Query: 23 IWI-EVLVIGYIEFQR------NSELDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAVVTGKGPLNNWATHLSDPLH 289 IW +V+++G +E R +DP LYPGG F DPLGLA DPE A L++ E+K+ RLAM + GF VQA+VTGKGPL N A H++DP++ Sbjct: 157 IWACQVVLMGAVEGYRIAGGPLGEVVDP---LYPGGSF-DPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVN 248
BLAST of EY659575 vs. ExPASy Swiss-Prot
Match: CB29_MAIZE (Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 4.006e-16 Identity = 49/96 (51.04%), Postives = 64/96 (66.67%), Query Frame = 2 Query: 23 IWI-EVLVIGYIEFQR------NSELDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAVVTGKGPLNNWATHLSDPLH 289 IW +V+++G IE R +DP LYPGG F DPLGLA DPE A +++ E+K+ RLAM + GF VQA+VTGKGPL N A HL+DP++ Sbjct: 160 IWACQVVLMGAIEGYRVAGGPLGEVVDP---LYPGGTF-DPLGLADDPEAFADVKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 251
BLAST of EY659575 vs. ExPASy Swiss-Prot
Match: CB22_CUCSA (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 5.232e-16 Identity = 48/96 (50.00%), Postives = 63/96 (65.62%), Query Frame = 2 Query: 23 IWI-EVLVIGYIEFQR------NSELDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAVVTGKGPLNNWATHLSDPLH 289 IW +V+++G +E R DP +YPGG F DPLGLA DPE A L++ E+K+ RLAM + GF VQA+VTGKGPL N A HL+DP++ Sbjct: 101 IWACQVVLMGAVEGYRIAGGPLGEVTDP---IYPGGSF-DPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 192
BLAST of EY659575 vs. ExPASy Swiss-Prot
Match: CB21_CUCSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 5.232e-16 Identity = 48/96 (50.00%), Postives = 63/96 (65.62%), Query Frame = 2 Query: 23 IWI-EVLVIGYIEFQR------NSELDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAVVTGKGPLNNWATHLSDPLH 289 IW +V+++G +E R DP +YPGG F DPLGLA DPE A L++ E+K+ RLAM + GF VQA+VTGKGPL N A HL+DP++ Sbjct: 150 IWACQVVLMGAVEGYRIAGGPLGEVTDP---IYPGGSF-DPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 241
BLAST of EY659575 vs. ExPASy Swiss-Prot
Match: CB2_CHLMO (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas moewusii PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 6.834e-16 Identity = 48/98 (48.98%), Postives = 64/98 (65.31%), Query Frame = 2 Query: 8 SITTLIWIEVLVIGYIEFQR------NSELDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAVVTGKGPLNNWATHLSDP 283 +I + ++V+++G IE R LDP LYPG + FDPLGLA DP+ A L++ EIK+ RLAM + GF VQA+VTGKGP+ N A HL+DP Sbjct: 147 NIVATLAVQVVLMGLIEGYRVNGGPAGEGLDP---LYPG-ESFDPLGLADDPDTFAELKVKEIKNGRLAMFSCFGFFVQAIVTGKGPIQNLADHLADP 240
BLAST of EY659575 vs. ExPASy Swiss-Prot
Match: CB2A_PINSY (Chlorophyll a-b binding protein type 2 member 1A, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 6.834e-16 Identity = 48/96 (50.00%), Postives = 63/96 (65.62%), Query Frame = 2 Query: 23 IWI-EVLVIGYIEFQR------NSELDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAVVTGKGPLNNWATHLSDPLH 289 IW +V+++G IE R DP +YPGG F DPLGLA DP+ A L++ EIK+ RLAM + GF VQA+VTGKGP+ N A HL+DP++ Sbjct: 173 IWACQVILMGAIEGYRVAGGPLGEVTDP---IYPGGNF-DPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVN 264
BLAST of EY659575 vs. ExPASy Swiss-Prot
Match: CB22_PETSP (Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp. GN=CAB22L PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 6.834e-16 Identity = 49/96 (51.04%), Postives = 63/96 (65.62%), Query Frame = 2 Query: 23 IWI-EVLVIGYIEFQRNSE------LDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAVVTGKGPLNNWATHLSDPLH 289 IW +VL++G +E R + +DP LYPGG F DPLGLA DPE A L++ E K+ RLAM + GF +QA+VTGKGPL N A HL DP++ Sbjct: 162 IWACQVLLMGAVEGYRVAGGPLGVVVDP---LYPGGSF-DPLGLAEDPEAFAELKVKETKNGRLAMFSMFGFFIQAIVTGKGPLENLADHLVDPVN 253
BLAST of EY659575 vs. ExPASy Swiss-Prot
Match: CB21_GOSHI (Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 6.834e-16 Identity = 47/95 (49.47%), Postives = 63/95 (66.32%), Query Frame = 2 Query: 23 IWI-EVLVIGYIEFQR------NSELDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAVVTGKGPLNNWATHLSDPL 286 IW +V+++G++E R LDP +YPGG F DPLGLA DP+ A L++ EIK+ RLAM + GF VQA+VTGKGP+ N HL+DP+ Sbjct: 160 IWACQVVLMGFVEGYRVGGGPLGEGLDP---IYPGGAF-DPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPV 250 The following BLAST results are available for this feature:
BLAST of EY659575 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659575 ID=EY659575; Name=EY659575; organism=Citrus sinensis; type=EST; length=489bpback to top |