DR908405
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908405 vs. ExPASy Swiss-Prot
Match: RL9_DROME (60S ribosomal protein L9 OS=Drosophila melanogaster GN=RpL9 PE=1 SV=2) HSP 1 Score: 197.208 bits (500), Expect = 9.701e-52 Identity = 99/181 (54.70%), Postives = 126/181 (69.61%), Query Frame = 3 Query: 54 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRNFLMG 596 M+TI S++ + IP +K + A+V+ + G RG L R FKHL LD ++ KR LK++ WFG++K AA+RT SH+ N+I GVT G++YKMR VYAHFPIN NN IEIRNFLGEK +R+V+M GVTV+ S KDEL+++GNDIE VS SAALI Q VKNKDIR FL G Sbjct: 1 MRTINSNQCVKIPKDIKASVKARVVTITGTRGTLKRSFKHLALDMYM-----PDKRTLKVEKWFGTKKELAAVRTVCSHIENMIKGVTFGFQYKMRAVYAHFPINCVTSENNTVIEIRNFLGEKYIRRVEMAPGVTVVNSTAQKDELIVEGNDIESVSGSAALIQQSTTVKNKDIRKFLDG 176 HSP 2 Score: 27.7202 bits (60), Expect = 9.701e-52 Identity = 10/15 (66.67%), Postives = 15/15 (100.00%), Query Frame = 2 Query: 581 EFLDGIYVSEKSTIL 625 +FLDG+YVSEK+T++ Sbjct: 172 KFLDGLYVSEKTTVV 186
BLAST of DR908405 vs. ExPASy Swiss-Prot
Match: RL9_SPOFR (60S ribosomal protein L9 OS=Spodoptera frugiperda GN=RpL9 PE=2 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 1.265e-51 Identity = 98/181 (54.14%), Postives = 129/181 (71.27%), Query Frame = 3 Query: 54 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRNFLMG 596 MK I++++ + IP+G+ V + ++++ V+GPRG L R+FKHL +D ++ R LK++ WFGS+K AA+RT SHV N+I GVTKG++YKMR VYAHFPIN N IEIRNFLGEK +R+V M GVTV+ S K KDEL+++GN +E VS SAALI Q VKNKDIR FL G Sbjct: 1 MKQIVANQKVKIPEGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNP-----RVLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRSVYAHFPINCVTTEGNSVIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDG 176 HSP 2 Score: 27.7202 bits (60), Expect = 1.265e-51 Identity = 11/18 (61.11%), Postives = 16/18 (88.89%), Query Frame = 2 Query: 581 EFLDGIYVSEKSTILGEE 634 +FLDG+YVSEK+T+ +E Sbjct: 172 KFLDGLYVSEKTTVEVDE 189
BLAST of DR908405 vs. ExPASy Swiss-Prot
Match: RL9_ICTPU (60S ribosomal protein L9 OS=Ictalurus punctatus GN=rpl9 PE=2 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 1.450e-51 Identity = 105/192 (54.69%), Postives = 131/192 (68.23%), Query Frame = 3 Query: 54 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRNFLMGSMSVRKAPYLE 629 MKTILS++T+DIPD V V + + + V+GPRG L R+F H+NL+ L+ ++ +KL++D W+G+RK A +RT SHV N+I GVT G+RYKMR VYAHFPIN I +EIRNFLGEK +R+V M GV S KDELVL+GNDIELVS SAALI Q VKNKDIR FL G K +E Sbjct: 1 MKTILSTQTVDIPDNVDVTLKGRTVSVKGPRGVLRREFNHINLELRLLGKKQ---KKLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQETGSLVEIRNFLGEKYIRRVRMRPGVNCALSAAQKDELVLEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTVVE 189
BLAST of DR908405 vs. ExPASy Swiss-Prot
Match: RL9_DICDI (60S ribosomal protein L9 OS=Dictyostelium discoideum GN=rpl9 PE=1 SV=2) HSP 1 Score: 192.586 bits (488), Expect = 1.501e-48 Identity = 95/194 (48.97%), Postives = 134/194 (69.07%), Query Frame = 3 Query: 54 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRNFLMGSMSVRKAPYLEKN 635 MK I SS + IP+ V V + + ++V GPRG LS+ F H ++D +L+ GK++L +D WFG+RK A I+T S + N+ITGVTKGY YKMRFVYAHFPIN ++ + + +EIRNF GEK VR++++LDG+T R++K KDE+VL GN +EL+S+S A I + +K KD+R FL G + V + LE N Sbjct: 1 MKVINSSRKVQIPENVTVDVKGRSVKVTGPRGTLSKSFDHASVDINLV-----GKKELTVDLWFGNRKQIACIKTITSIIENMITGVTKGYEYKMRFVYAHFPINVAVTDGGRVVEIRNFFGEKIVRRIELLDGITCYRNEKAKDEIVLTGNSLELLSQSCATIQLRSAIKYKDVRKFLDG-IYVSERNVLESN 188
BLAST of DR908405 vs. ExPASy Swiss-Prot
Match: RL9_CAEEL (60S ribosomal protein L9 OS=Caenorhabditis elegans GN=rpl-9 PE=1 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 1.553e-45 Identity = 90/181 (49.72%), Postives = 124/181 (68.51%), Query Frame = 3 Query: 54 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRNFLMG 596 MK I S++T+ P+GV + +++ V GPRG + +DF+HL+++ E GK L++ WFG RK AAIRT SH+ N+I GVT G+RYKMR VYAHFPIN ++ + N+ +EIRNFLGEK VR+V + +GV S KDE+V++GND++ VS++AA I Q VK KDIR FL G Sbjct: 1 MKLIESNDTVVFPEGVTFTVKNRIVHVTGPRGTIRKDFRHLHMEM-----ERIGKSTLRVRKWFGVRKELAAIRTVCSHIKNMIKGVTVGFRYKMRSVYAHFPINVTLQDGNRTVEIRNFLGEKIVRRVPLPEGVIATISTAQKDEIVVEGNDVQFVSQAAARIQQSTAVKEKDIRKFLDG 176
BLAST of DR908405 vs. ExPASy Swiss-Prot
Match: RL9B_YEAST (60S ribosomal protein L9-B OS=Saccharomyces cerevisiae GN=RPL9B PE=1 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 2.245e-44 Identity = 91/183 (49.73%), Postives = 128/183 (69.95%), Query Frame = 3 Query: 54 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNN--KAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRNFLMG 596 MK I + + ++IP+GV V I +++++V GPRG L+++ KH+++ F + + +K+ G RK AA+RT S V N+ITGVTKGY+YKMR+VYAHFPIN +I + K IE+RNFLG+KK+R V + DGVT+ S VKDE+VL GN +E VS++AA + Q C V+NKDIR FL G Sbjct: 1 MKYIQTEQQIEIPEGVTVSIKSRIVKVVGPRGTLTKNLKHIDVTF-----TKVNNQLIKVAVHNGDRKHVAALRTVKSLVDNMITGVTKGYKYKMRYVYAHFPINVNIVEKDGAKFIEVRNFLGDKKIRNVPVRDGVTIEFSTNVKDEIVLSGNSVEDVSQNAADLQQICRVRNKDIRKFLDG 178 HSP 2 Score: 23.8682 bits (50), Expect = 2.245e-44 Identity = 10/15 (66.67%), Postives = 12/15 (80.00%), Query Frame = 2 Query: 581 EFLDGIYVSEKSTIL 625 +FLDGIYVS K I+ Sbjct: 174 KFLDGIYVSHKGFIV 188
BLAST of DR908405 vs. ExPASy Swiss-Prot
Match: RL9A_YEAST (60S ribosomal protein L9-A OS=Saccharomyces cerevisiae GN=RPL9A PE=1 SV=2) HSP 1 Score: 176.022 bits (445), Expect = 3.813e-44 Identity = 90/183 (49.18%), Postives = 128/183 (69.95%), Query Frame = 3 Query: 54 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNN--KAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRNFLMG 596 MK I + + +++P+GV V I +++++V GPRG L+++ KH+++ F + + +K+ G RK AA+RT S V N+ITGVTKGY+YKMR+VYAHFPIN +I + K IE+RNFLG+KK+R V + DGVT+ S VKDE+VL GN +E VS++AA + Q C V+NKDIR FL G Sbjct: 1 MKYIQTEQQIEVPEGVTVSIKSRIVKVVGPRGTLTKNLKHIDVTF-----TKVNNQLIKVAVHNGGRKHVAALRTVKSLVDNMITGVTKGYKYKMRYVYAHFPINVNIVEKDGAKFIEVRNFLGDKKIRNVPVRDGVTIEFSTNVKDEIVLSGNSVEDVSQNAADLQQICRVRNKDIRKFLDG 178 HSP 2 Score: 23.483 bits (49), Expect = 3.813e-44 Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 2 Query: 581 EFLDGIYVSEKSTI 622 +FLDGIYVS K I Sbjct: 174 KFLDGIYVSHKGFI 187
BLAST of DR908405 vs. ExPASy Swiss-Prot
Match: RL9B_SCHPO (60S ribosomal protein L9-B OS=Schizosaccharomyces pombe GN=rpl9b PE=2 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.434e-43 Identity = 87/180 (48.33%), Postives = 121/180 (67.22%), Query Frame = 3 Query: 57 KTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRNFLMG 596 + I ET+ IP+GV V I A+++ V+GPRG L ++ + ++++ + +K W GSRK +A IRTA S + N+I GVT+G+RYKMR VYAHFPIN ++ N +EIRNFLGE+ R + L GVTV S VKDE++++GN +E VS+SAA I Q C+V+NKDIR FL G Sbjct: 3 RDIYKDETLTIPEGVSVDIKARLVTVKGPRGVLKQNLRRVDIELKKQGNT------IKFIVWHGSRKHNACIRTAYSIINNMIIGVTQGFRYKMRLVYAHFPININLTENGTVVEIRNFLGERITRVIKCLPGVTVSISSAVKDEIIIEGNSLENVSQSAANIKQICNVRNKDIRKFLDG 176 HSP 2 Score: 25.0238 bits (53), Expect = 1.434e-43 Identity = 10/14 (71.43%), Postives = 12/14 (85.71%), Query Frame = 2 Query: 581 EFLDGIYVSEKSTI 622 +FLDGIYVSE+ I Sbjct: 172 KFLDGIYVSERGNI 185
BLAST of DR908405 vs. ExPASy Swiss-Prot
Match: RL9A_SCHPO (60S ribosomal protein L9-A OS=Schizosaccharomyces pombe GN=rpl9a PE=2 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 9.146e-43 Identity = 87/180 (48.33%), Postives = 118/180 (65.56%), Query Frame = 3 Query: 57 KTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRNFLMG 596 + I ET+ IP GV V I A+ + V GPRG L ++ +H++++ + +K W GSRK +A IR+ S + N+I GVT+G+RYKMR VYAHFPIN ++ N +EIRNFLGE+ R + L GVTV S VKDE++L+GN +E VS+SAA I Q C+V+NKDIR FL G Sbjct: 3 RDIYKDETLTIPKGVTVDIKARNVTVTGPRGTLKQNLRHVDIEMKKQGNT------IKFIVWHGSRKHNACIRSVYSIINNMIIGVTQGFRYKMRLVYAHFPININLTENGTVVEIRNFLGERITRVIKCLPGVTVSISSAVKDEIILEGNSLENVSQSAANIKQICNVRNKDIRKFLDG 176 HSP 2 Score: 25.0238 bits (53), Expect = 9.146e-43 Identity = 10/14 (71.43%), Postives = 12/14 (85.71%), Query Frame = 2 Query: 581 EFLDGIYVSEKSTI 622 +FLDGIYVSE+ I Sbjct: 172 KFLDGIYVSERGNI 185
BLAST of DR908405 vs. ExPASy Swiss-Prot
Match: RL9_HAECO (60S ribosomal protein L9 (Fragment) OS=Haemonchus contortus PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.611e-34 Identity = 69/131 (52.67%), Postives = 92/131 (70.23%), Query Frame = 3 Query: 54 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDM 446 MK + S++T+D PDGV + +V+ V GPRG L RDF+HL+++ E GK +L++ WFG RK AAIRT SH+ N+I GVTKG+RYKMR VYAHFPIN ++ + + +EIRNFLGEK VR V + Sbjct: 1 MKLVESNDTVDFPDGVTFTVKNRVVHVTGPRGTLKRDFRHLHMEM-----ERVGKNQLRVRKWFGVRKEIAAIRTVCSHIQNMIKGVTKGFRYKMRSVYAHFPINVTLQDGGRTVEIRNFLGEKIVRPVPL 126 The following BLAST results are available for this feature:
BLAST of DR908405 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 62
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908405 ID=DR908405; Name=DR908405; organism=Citrus sinensis; type=EST; length=648bpback to top |