DR908372

Overview
NameDR908372
Unique NameDR908372
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length655
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908372 vs. ExPASy Swiss-Prot
Match: ALDH2_BOVIN (Aldehyde dehydrogenase, mitochondrial OS=Bos taurus GN=ALDH2 PE=1 SV=2)

HSP 1 Score: 220.32 bits (560), Expect = 6.916e-57
Identity = 104/218 (47.71%), Postives = 147/218 (67.43%), Query Frame = 2
Query:    2 PLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 655
            P +I  D D++ A + A   + FN+G+ C A SR +VQE IY EF ++ V +AK+ VVG+PFD    QGPQVD+ QF ++L YI+ GK EGA LL             +PT+F +V + M IAK EIFGPVM ++KFK++EE +  ANN++YGLAA + TKDL+ AN +S++++AG +W+NCY  F +  P+GGYK+SG GR+ G   L  Y +VK+V
Sbjct:  294 PNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYAEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKVLGYIKSGKEEGAKLLCGGGAAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKSMEEVVGRANNSKYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKLSGSGRELGEYGLQAYTEVKTV 511          
BLAST of DR908372 vs. ExPASy Swiss-Prot
Match: ALDH_EMENI (Aldehyde dehydrogenase OS=Emericella nidulans GN=aldA PE=3 SV=2)

HSP 1 Score: 218.779 bits (556), Expect = 2.012e-56
Identity = 106/218 (48.62%), Postives = 142/218 (65.14%), Query Frame = 2
Query:    2 PLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 655
            P ++FDD D++ A   A  GI FN G+ C A SR+ VQEGIYD+F  +  E+A+   VG+PF+    QGPQV + QFDRI+ YI HGK+ GAT+ T            +PT+FT+VT DM IA+ EIFGPV+ + KFK   EAIK  N+T YGLAA + TK++N A  VS +++AG +WIN Y       P+GG+K SG GR+ G  +L NY Q+K+V
Sbjct:  270 PNIVFDDADIDNAISWANFGIFFNHGQCCCAGSRILVQEGIYDKFVARFKERAQKNKVGNPFEQDTFQGPQVSQLQFDRIMEYINHGKKAGATVATGGDRHGNEGYFIQPTVFTDVTSDMKIAQEEIFGPVVTIQKFKDEAEAIKIGNSTDYGLAAAVHTKNVNTAIRVSNALKAGTVWINNYNMISYQAPFGGFKQSGLGRELGSYALENYTQIKTV 487          
BLAST of DR908372 vs. ExPASy Swiss-Prot
Match: AL1A2_TAEGU (Retinal dehydrogenase 2 OS=Taeniopygia guttata GN=ALDH1A2 PE=2 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.012e-56
Identity = 106/218 (48.62%), Postives = 148/218 (67.89%), Query Frame = 2
Query:    2 PLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 655
            P +IF D D++ A + A  G+ FN+G+ C A SR+YV+E IY+EF +K V++AK  +VG PFDP   QGPQ+DKKQ+++IL  I+ G  EGA L              EPT+F+NVT+DM IAK EIFGPV  +++FKT++E I+ ANN+ +GL A + T D+N A TVS +++AG +WINCY A ++  P+GG K SG GR+ G   L  Y +VK+V
Sbjct:  292 PNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIYVEESIYEEFVRKSVKRAKRKIVGSPFDPTTEQGPQIDKKQYNKILELIQSGITEGAKLECGGKGLGRKGFFIEPTVFSNVTDDMRIAKEEIFGPVQEILRFKTMDEVIERANNSDFGLVAAVFTNDINKALTVSSAMQAGTVWINCYNALNAQSPFGGSK-SGNGREMGECGLREYSEVKTV 508          
BLAST of DR908372 vs. ExPASy Swiss-Prot
Match: ALDH_ASPNG (Aldehyde dehydrogenase OS=Aspergillus niger GN=aldA PE=3 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 5.854e-56
Identity = 107/218 (49.08%), Postives = 141/218 (64.68%), Query Frame = 2
Query:    2 PLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 655
            P ++F+D D++ A   A  GI +N G+ C A SR+ VQEGIYD+F  +L E+A    VGDPF     QGPQV + QFDRI+ YI+HGK  GAT+              +PT+FT+VT DM I + EIFGPV+ + KFK VE+AIK  N+T YGLAAGI TKD+  A  VS ++RAG +W+N Y       P+GG+K SG GR+ G  +L NY Q+K+V
Sbjct:  271 PNIVFNDADIDNAISWANFGIFYNHGQCCCAGSRILVQEGIYDKFIARLKERALQNKVGDPFAKDTFQGPQVSQLQFDRIMEYIQHGKDAGATVAVGGERHGTEGYFIQPTVFTDVTSDMKINQEEIFGPVVTVQKFKDVEDAIKIGNSTSYGLAAGIHTKDVTTAIRVSNALRAGTVWVNSYNLIQYQVPFGGFKESGIGRELGSYALENYTQIKAV 488          
BLAST of DR908372 vs. ExPASy Swiss-Prot
Match: AL1A3_MOUSE (Aldehyde dehydrogenase family 1 member A3 OS=Mus musculus GN=Aldh1a3 PE=2 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 9.986e-56
Identity = 104/218 (47.71%), Postives = 148/218 (67.89%), Query Frame = 2
Query:    2 PLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 655
            P ++  D D++ A + A  G+ FN+G+ C A+SRV+V+E +Y EF ++ VE AK   VGDPFD    QGPQ+D+KQFD+IL  IE GK+EGA L              +PT+F++VT++M IAK EIFGPV  ++KFK +EE IK AN+T YGL A + TK+L+ A  ++ ++ +G +WINCY AF +  P+GG+KMSG GR+ G  +L  Y +VK+V
Sbjct:  286 PCIVCADADLDLAVECAHQGVFFNQGQCCTAASRVFVEEQVYGEFVRRSVEFAKKRPVGDPFDAKTEQGPQIDQKQFDKILELIESGKKEGAKLECGGSAMEDRGLFIKPTVFSDVTDNMRIAKEEIFGPVQPILKFKNLEEVIKRANSTDYGLTAAVFTKNLDKALKLAAALESGTVWINCYNAFYAQAPFGGFKMSGNGRELGEYALAEYTEVKTV 503          
BLAST of DR908372 vs. ExPASy Swiss-Prot
Match: AL1A3_RAT (Aldehyde dehydrogenase family 1 member A3 OS=Rattus norvegicus GN=Aldh1a3 PE=2 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.304e-55
Identity = 103/218 (47.25%), Postives = 148/218 (67.89%), Query Frame = 2
Query:    2 PLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 655
            P ++  D D++ A + A  G+ FN+G+ C A+SRV+V+E +Y EF ++ VE AK   VGDPFD    QGPQ+D+KQFD+IL  IE GK+EGA L              +PT+F++VT++M IAK EIFGPV  ++KFK +EE IK AN+T YGL A + TK+L+ A  ++ ++ +G +W+NCY AF +  P+GG+KMSG GR+ G  +L  Y +VK+V
Sbjct:  286 PCIVCADADLDLAVECAHQGVFFNQGQCCTAASRVFVEEQVYGEFVRRSVEFAKKRPVGDPFDAKTEQGPQIDQKQFDKILELIESGKKEGAKLECGGSAMEDRGLFIKPTVFSDVTDNMRIAKEEIFGPVQPILKFKNLEEVIKRANSTDYGLTAAVFTKNLDKALKLASALESGTVWVNCYNAFYAQAPFGGFKMSGNGRELGEYALAEYTEVKTV 503          
BLAST of DR908372 vs. ExPASy Swiss-Prot
Match: AL1A3_HUMAN (Aldehyde dehydrogenase family 1 member A3 OS=Homo sapiens GN=ALDH1A3 PE=1 SV=2)

HSP 1 Score: 215.312 bits (547), Expect = 2.225e-55
Identity = 103/218 (47.25%), Postives = 147/218 (67.43%), Query Frame = 2
Query:    2 PLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 655
            P ++  D D++ A + A  G+ FN+G+ C A+SRV+V+E +Y EF ++ VE AK   VGDPFD    QGPQ+D+KQFD+IL  IE GK+EGA L              +PT+F+ VT++M IAK EIFGPV  ++KFK++EE IK AN+T YGL A + TK+L+ A  ++ ++ +G +WINCY A  +  P+GG+KMSG GR+ G  +L  Y +VK+V
Sbjct:  286 PCIVCADADLDLAVECAHQGVFFNQGQCCTAASRVFVEEQVYSEFVRRSVEYAKKRPVGDPFDVKTEQGPQIDQKQFDKILELIESGKKEGAKLECGGSAMEDKGLFIKPTVFSEVTDNMRIAKEEIFGPVQPILKFKSIEEVIKRANSTDYGLTAAVFTKNLDKALKLASALESGTVWINCYNALYAQAPFGGFKMSGNGRELGEYALAEYTEVKTV 503          
BLAST of DR908372 vs. ExPASy Swiss-Prot
Match: ALDH_AGABI (Aldehyde dehydrogenase OS=Agaricus bisporus GN=aldA PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.104e-54
Identity = 101/218 (46.33%), Postives = 142/218 (65.14%), Query Frame = 2
Query:    2 PLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 655
            P++IFDD D+  + +    G+ +N G+ C A +R++VQEGIYD+F +K  +K K   +GDPF   + QGPQV + Q+DRI+SYIE G+ EGAT+              +PTIFT+ T DM I K EIFGPV A++KFK  +E IK AN++ YGLAA + ++D+N A   + + +AG  W+NC    D+  P+GGYK SG GR+ G  +LHNY  VK+V
Sbjct:  275 PVVIFDDADLEQSVNWTAHGLFWNHGQACCAGTRIFVQEGIYDKFLQKFTDKIKEIKLGDPFGLGIDQGPQVSQIQYDRIMSYIESGRAEGATVHVGGERHGNEGYFIQPTIFTDTTPDMKIVKEEIFGPVGAVIKFKDGKEVIKQANDSNYGLAAAVFSQDINKAIETAHAFKAGTAWVNCANTIDAGVPFGGYKQSGIGRELGEYALHNYTNVKAV 492          
BLAST of DR908372 vs. ExPASy Swiss-Prot
Match: ALDH_ALTAL (Aldehyde dehydrogenase OS=Alternaria alternata GN=ALTA10 PE=1 SV=2)

HSP 1 Score: 211.46 bits (537), Expect = 3.212e-54
Identity = 106/218 (48.62%), Postives = 136/218 (62.39%), Query Frame = 2
Query:    2 PLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 655
            P ++F D D++ A      GI FN G+ C A SR+YVQE IYD+F ++  E+A    VGDPF     QGPQV + QFDRI+ YIE GK+ GAT+ T            EPTIF+NVTEDM I + EIFGPV  + KFKT  + IK  NNT YGLAA + T +L  A  V+ ++RAG +W+N Y       P+GGYK SG GR+ G  +L NY+Q K+V
Sbjct:  270 PNIVFADADLDEAIHWVNFGIYFNHGQACCAGSRIYVQEEIYDKFIQRFKERAAQNAVGDPFAADTFQGPQVSQLQFDRIMGYIEEGKKSGATIETGGNRKGDKGYFIEPTIFSNVTEDMKIQQEEIFGPVCTISKFKTKADVIKIGNNTTYGLAAAVHTSNLTTAIEVANALRAGTVWVNSYNTLHWQLPFGGYKESGIGRELGEAALDNYIQTKTV 487          
BLAST of DR908372 vs. ExPASy Swiss-Prot
Match: ALDH_ENCBU (Aldehyde dehydrogenase OS=Enchytraeus buchholzi GN=ALDH PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.033e-52
Identity = 103/218 (47.25%), Postives = 139/218 (63.76%), Query Frame = 2
Query:    2 PLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 655
            P +IF D D++ A +++   I+ N G++C A SR +V E IY+EF ++ VE+AK   VGDPFDP    GPQVD+ Q  +IL  IE GK EGA L              EPT+FT+VT  M +AK EIFGPV  + KFK V+E I+ AN+T YGLAA + TK+++ A  V+ S+ AG +W+N Y  F    P+GGYKMSG GR+ G   L  +L+VK+V
Sbjct:  272 PNIIFPDSDLDYAVEVSHQAIMANMGQVCCAGSRTFVHEDIYEEFVRRSVERAKKRTVGDPFDPKNENGPQVDETQLKKILELIESGKTEGAKLECGGKRLGDKGYFVEPTVFTDVTSSMRVAKEEIFGPVQLIFKFKDVDEVIERANDTSYGLAAAVFTKNIDTALKVANSLEAGTVWVNTYNHFAFQAPFGGYKMSGQGREFGHYGLEAFLEVKTV 489          
The following BLAST results are available for this feature:
BLAST of DR908372 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ALDH2_BOVIN6.916e-5747.71Aldehyde dehydrogenase, mitochondrial OS=Bos tauru... [more]
ALDH_EMENI2.012e-5648.62Aldehyde dehydrogenase OS=Emericella nidulans GN=a... [more]
AL1A2_TAEGU2.012e-5648.62Retinal dehydrogenase 2 OS=Taeniopygia guttata GN=... [more]
ALDH_ASPNG5.854e-5649.08Aldehyde dehydrogenase OS=Aspergillus niger GN=ald... [more]
AL1A3_MOUSE9.986e-5647.71Aldehyde dehydrogenase family 1 member A3 OS=Mus m... [more]
AL1A3_RAT1.304e-5547.25Aldehyde dehydrogenase family 1 member A3 OS=Rattu... [more]
AL1A3_HUMAN2.225e-5547.25Aldehyde dehydrogenase family 1 member A3 OS=Homo ... [more]
ALDH_AGABI1.104e-5446.33Aldehyde dehydrogenase OS=Agaricus bisporus GN=ald... [more]
ALDH_ALTAL3.212e-5448.62Aldehyde dehydrogenase OS=Alternaria alternata GN=... [more]
ALDH_ENCBU1.033e-5247.25Aldehyde dehydrogenase OS=Enchytraeus buchholzi GN... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_16500 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-54_G10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908372 ID=DR908372; Name=DR908372; organism=Citrus sinensis; type=EST; length=655bp
ACCTCTCTTGATTTTTGATGATGTTGATGTAAACACAGCTGCAGACATGG
CGCTTCTGGGCATCCTGTTTAACAAGGGAGAAATTTGTGTGGCAAGTTCT
CGTGTTTATGTCCAGGAAGGAATTTATGATGAATTTGAAAAGAAGTTGGT
CGAAAAGGCAAAAGCTTGGGTAGTTGGTGATCCTTTTGATCCTGCAGTTC
GTCAAGGACCCCAGGTCGATAAGAAGCAGTTCGATAGAATTCTTTCGTAC
ATTGAGCATGGCAAGAGGGAAGGAGCCACATTGTTAACAGGGGGTAAGCC
TATCGGCAAGAAGGGGTATTATATTGAGCCTACAATTTTCACAAATGTTA
CGGAAGACATGCTGATAGCAAAGAATGAAATTTTCGGACCTGTGATGGCA
TTGATGAAATTCAAGACTGTTGAGGAGGCAATTAAGAGTGCAAATAATAC
CAGATATGGCCTAGCAGCAGGCATTATGACAAAGGACTTGAATGTGGCTA
ATACCGTCTCTAGATCAATTCGAGCAGGCATTATATGGATCAATTGTTAT
TTTGCTTTTGACAGCGACTGCCCTTACGGAGGATACAAGATGAGTGGATT
TGGTAGAGACTGTGGACTGGAATCTCTACATAACTATCTGCAGGTCAAGT
CCGTT
back to top