DR908372

Overview
NameDR908372
Unique NameDR908372
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length655
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908372 vs. ExPASy Swiss-Prot
Match: AL1L2_MOUSE (Probable 10-formyltetrahydrofolate dehydrogenase ALDH1L2 OS=Mus musculus GN=Aldh1l2 PE=2 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.382e-49
Identity = 94/220 (42.73%), Postives = 139/220 (63.18%), Query Frame = 2
Query:    2 PLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKT--VEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 655
            PL+IF D D+  A  M +  + FNKGE C+A+ R++V+E I+DEF  ++VE+ K   +GDP D +   GPQ  +   +++L Y E G +EGATL+             EPT+FT V + M +AK E FGP+M + KF+   ++  ++ ANNT YGLA+G+ T+D+N A  VS  + AG ++IN Y   D   P+GG K SGFG+D G E+L+ YL++K+V
Sbjct:  700 PLIIFSDCDLEKAVRMGMGAVFFNKGENCIAAGRLFVEEAIHDEFVTRVVEEIKKMKIGDPLDRSTDHGPQNHRAHLEKLLQYCETGVQEGATLVYGGRQVQRPGFFMEPTVFTGVEDHMYLAKEESFGPIMVISKFQNGDIDGVLQRANNTEYGLASGVFTRDINKAMYVSDKLEAGTVFINTYNKTDVAAPFGGMKQSGFGKDLGEEALNEYLKIKTV 919          
BLAST of DR908372 vs. ExPASy Swiss-Prot
Match: BETB_RHOS4 (Betaine aldehyde dehydrogenase OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=betB PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.111e-49
Identity = 95/218 (43.58%), Postives = 140/218 (64.22%), Query Frame = 2
Query:    2 PLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 655
            PL++FDD D+ +A   A+LG  ++ G+IC   +RV+VQ+GI + F  +L E+A A  +GDP DP V+ GP V + Q +++L+YIE  + EG  L+             +PT+F +VT+ M +A+ E+FGPVMA++ F+T EEAI  AN T +GLAAG+ T DL  A+ V   ++AG  WIN Y     + P+GG K+SG GR+ G  ++ +Y QVKSV
Sbjct:  255 PLIVFDDADLESAIGAAMLGNFYSAGQICSNGTRVFVQKGIKEAFLARLAERADAIRMGDPLDPEVQMGPLVSQAQLEKVLAYIEKARAEGGRLVCGGEASVSPGCYVQPTVFADVTDAMTLAREEVFGPVMAVLDFETEEEAIARANATDFGLAAGVFTADLTRAHRVVAQLQAGTCWINAYNLTPVEAPFGGVKLSGVGRENGRAAVQHYTQVKSV 472          
BLAST of DR908372 vs. ExPASy Swiss-Prot
Match: BETB_RHOS1 (Betaine aldehyde dehydrogenase OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=betB PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.111e-49
Identity = 95/218 (43.58%), Postives = 140/218 (64.22%), Query Frame = 2
Query:    2 PLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 655
            PL++FDD D+ +A   A+LG  ++ G+IC   +RV+VQ+GI + F  +L E+A A  +GDP DP V+ GP V + Q +++L+YIE  + EG  L+             +PT+F +VT+ M +A+ E+FGPVMA++ F+T EEAI  AN T +GLAAG+ T DL  A+ V   ++AG  WIN Y     + P+GG K+SG GR+ G  ++ +Y QVKSV
Sbjct:  255 PLIVFDDADLESAIGAAMLGNFYSAGQICSNGTRVFVQKGIKEAFLARLAERADAIRMGDPLDPEVQMGPLVSQAQLEKVLAYIEKARAEGGRLVCGGEASVSPGCYVQPTVFADVTDAMTLAREEVFGPVMAVLDFETEEEAIARANATDFGLAAGVFTADLTRAHRVVAQLQAGTCWINAYNLTPVEAPFGGVKLSGVGRENGRAAVEHYTQVKSV 472          
BLAST of DR908372 vs. ExPASy Swiss-Prot
Match: BETB_OCHA4 (Betaine aldehyde dehydrogenase OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=betB PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.111e-49
Identity = 95/222 (42.79%), Postives = 142/222 (63.96%), Query Frame = 2
Query:    2 PLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLL----TXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 655
            P+++FDD D+ +A   A+LG  ++ G++C   +RV+V + + + F ++LVE+ +   +GDP D A + GP V++ Q D++LSYIE GK EGATL                  EPTIFT+VT+DM IA+ EIFGPVM++++F   +E I  AN+T +GLAAG+ T D+   + V   I+AG  WIN Y     + P+GGYK SG GR+ G+ +L +Y Q+K+V
Sbjct:  255 PIIVFDDADIESAIGGAMLGNFYSTGQVCSNGTRVFVHKNLRERFVERLVERTRKIRIGDPLDEATQMGPLVNRAQRDKVLSYIEKGKAEGATLACGGGVPKLQGFDKGYFIEPTIFTDVTDDMTIAREEIFGPVMSVLEFSDEDEVIARANDTEFGLAAGVFTADIARGHRVIGQIKAGTCWINAYNLTPVEVPFGGYKQSGIGRENGIAALAHYSQIKTV 476          
BLAST of DR908372 vs. ExPASy Swiss-Prot
Match: BETB_YERPY (Betaine aldehyde dehydrogenase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=betB PE=3 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 5.307e-49
Identity = 95/222 (42.79%), Postives = 144/222 (64.86%), Query Frame = 2
Query:    2 PLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLL----TXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 655
            PL+IF DVD++ AAD+A++   ++ G++C   +RV+V + +   FE+K+VE+ K   +GDP D  V  GP V  +  D ++ YI+ GKREGATLL    +             PT+FT+  +DM I + EIFGPVM+++ +++ EE I+ AN+T YGLAAG++T+DLN A+ V   ++AGI WIN +     + P GGYK SG GR+ G+ +L +Y Q+KS+
Sbjct:  258 PLIIFADVDLDKAADIAMMANFYSSGQVCTNGTRVFVPQALQAAFEQKIVERVKRIHIGDPSDERVNFGPLVSFQHRDSVMRYIDSGKREGATLLIGGCSLTEGALAHGAYVAPTVFTHCRDDMQIVREEIFGPVMSILSYQSEEEVIRRANDTEYGLAAGVVTQDLNRAHRVIHQLQAGICWINTWGESAPEMPVGGYKHSGVGRENGISTLEHYTQIKSI 479          
BLAST of DR908372 vs. ExPASy Swiss-Prot
Match: ALDH6_YEAST (Magnesium-activated aldehyde dehydrogenase, cytosolic OS=Saccharomyces cerevisiae GN=ALD6 PE=1 SV=4)

HSP 1 Score: 193.356 bits (490), Expect = 9.053e-49
Identity = 99/221 (44.80%), Postives = 141/221 (63.80%), Query Frame = 2
Query:    8 LIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWV-----VGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 655
            L+FDD ++       + GI  N G+IC + SR+YVQEGIYDE    L+   KA++     VG+PFD A  QG   +++QFD I++YI+ GK+EGA +LT             PT+F +V EDM I K EIFGPV+ + KFKT+EE ++ AN++ +GL +GI T+ L+    V++ ++AG +WIN Y  FDS  P+GG K SG+GR+ G E  H Y +VK+V
Sbjct:  280 LVFDDANIKKTLPNLVNGIFKNAGQICSSGSRIYVQEGIYDE----LLAAFKAYLETEIKVGNPFDKANFQGAITNRQQFDTIMNYIDIGKKEGAKILTGGEKVGDKGYFIRPTVFYDVNEDMRIVKEEIFGPVVTVAKFKTLEEGVEMANSSEFGLGSGIETESLSTGLKVAKMLKAGTVWINTYNDFDSRVPFGGVKQSGYGREMGEEVYHAYTEVKAV 496          
BLAST of DR908372 vs. ExPASy Swiss-Prot
Match: AL1L2_HUMAN (Probable 10-formyltetrahydrofolate dehydrogenase ALDH1L2 OS=Homo sapiens GN=ALDH1L2 PE=1 SV=2)

HSP 1 Score: 193.356 bits (490), Expect = 9.053e-49
Identity = 93/220 (42.27%), Postives = 141/220 (64.09%), Query Frame = 2
Query:    2 PLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKT--VEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 655
            PL+IF+D +++ A  M +  + FNKGE C+A+ R++V+E I+DEF  ++VE+ K   +GDP D +   GPQ  K   +++L Y E G +EGATL+             EPT+FT+V + M +AK E FGP+M + KF+   ++  ++ AN+T YGLA+G+ T+D+N A  VS  + AG ++IN Y   D   P+GG K SGFG+D G E+L+ YL+ K+V
Sbjct:  700 PLIIFNDCELDKAVRMGMGAVFFNKGENCIAAGRLFVEESIHDEFVTRVVEEIKKMKIGDPLDRSTDHGPQNHKAHLEKLLQYCETGVKEGATLVYGGRQVQRPGFFMEPTVFTDVEDYMYLAKEESFGPIMVISKFQNGDIDGVLQRANSTEYGLASGVFTRDINKAMYVSEKLEAGTVFINTYNKTDVAAPFGGVKQSGFGKDLGEEALNEYLKTKTV 919          
BLAST of DR908372 vs. ExPASy Swiss-Prot
Match: BETB_RHOSK (Betaine aldehyde dehydrogenase OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=betB PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.182e-48
Identity = 95/218 (43.58%), Postives = 139/218 (63.76%), Query Frame = 2
Query:    2 PLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 655
            PL++FDD D+ +A   A+LG  ++ G+IC   +RV+VQ+GI + F  +L E+A A  +GDP DP V+ GP V + Q +++L+YIE  + EG  L+             +PT+F +VT+ M +A  E+FGPVMA++ F+T EEAI  AN T +GLAAG+ T DL  A+ V   ++AG  WIN Y     + P+GG K+SG GR+ G  ++ +Y QVKSV
Sbjct:  255 PLIVFDDADLESAIGAAMLGNFYSAGQICSNGTRVFVQKGIKEAFLARLAERADAIRMGDPLDPEVQMGPLVSQAQLEKVLAYIEKARAEGGRLVCGGEASVSPGCYVQPTVFADVTDAMTLACEEVFGPVMAVLDFETEEEAIARANATDFGLAAGVFTADLTRAHRVVAQLQAGTCWINAYNLTPVEAPFGGVKLSGVGRENGRAAVEHYTQVKSV 472          
BLAST of DR908372 vs. ExPASy Swiss-Prot
Match: YLX7_SCHPO (Putative aldehyde dehydrogenase-like protein C922.07c OS=Schizosaccharomyces pombe GN=SPAC922.07c PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.017e-48
Identity = 100/220 (45.45%), Postives = 140/220 (63.64%), Query Frame = 2
Query:    2 PLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA-KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATL-LTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 655
            P L+F+D D++ A   A LGI++N G+IC ++SR+YVQ+ +YD+F +   +   + ++VG PFD     GP V+K Q++RI +YIE GK+EGA L L              PTIF + +E+M I K EIFGPV+A+ KFKT +EAI+ ANNT YGLAA   TKDL  A+ VS  + AG+++IN     D   P+GG KMSG G + G   +  Y Q+K+V
Sbjct:  269 PFLVFEDADLDQAVKWAALGIMYNSGQICTSNSRIYVQDSVYDKFIELFKKHVIQDYIVGMPFDDNTVVGPVVNKTQYNRIKNYIEQGKKEGAKLVLGDEPLPLKQGYFISPTIFADCSENMTIVKEEIFGPVVAISKFKTEDEAIEKANNTTYGLAAMCFTKDLERAHRVSDELEAGMVFINSTENSDIQAPFGGIKMSGIGNELGSNGIEMYTQIKAV 488          
BLAST of DR908372 vs. ExPASy Swiss-Prot
Match: ALDH2_LEITA (Aldehyde dehydrogenase, mitochondrial OS=Leishmania tarentolae GN=ALDH2 PE=1 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 3.440e-48
Identity = 93/217 (42.86%), Postives = 136/217 (62.67%), Query Frame = 2
Query:    5 LLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 655
            L++ +D D+  AA++A   + FN G++C ASSR+YV E +YDEF  +L + A+A  VG   D     GP V KKQ +R+L YIE G + GAT++T            +PTIF++V EDM I K EIFGPV  +MK+K ++E +K AN++ YGLAAGI T+ ++ A   S  + AG +W+N +  F    P+GG+K SG GR+ G E +  Y + K++
Sbjct:  272 LIVCEDADLEEAAEVATTRVYFNTGQVCTASSRIYVHESVYDEFVSRLRKNAEARKVGPGNDTGNNMGPLVSKKQHERVLGYIEDGVKAGATVVTGGKKIGDKGYFVQPTIFSDVKEDMRICKEEIFGPVTCVMKYKDMDEVVKRANDSIYGLAAGICTRSMDTALRYSTYLNAGTVWVNTWNNFCPSMPFGGFKQSGIGRELGKEVVDMYTEPKAI 488          
The following BLAST results are available for this feature:
BLAST of DR908372 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
AL1L2_MOUSE2.382e-4942.73Probable 10-formyltetrahydrofolate dehydrogenase A... [more]
BETB_RHOS43.111e-4943.58Betaine aldehyde dehydrogenase OS=Rhodobacter spha... [more]
BETB_RHOS13.111e-4943.58Betaine aldehyde dehydrogenase OS=Rhodobacter spha... [more]
BETB_OCHA43.111e-4942.79Betaine aldehyde dehydrogenase OS=Ochrobactrum ant... [more]
BETB_YERPY5.307e-4942.79Betaine aldehyde dehydrogenase OS=Yersinia pseudot... [more]
ALDH6_YEAST9.053e-4944.80Magnesium-activated aldehyde dehydrogenase, cytoso... [more]
AL1L2_HUMAN9.053e-4942.27Probable 10-formyltetrahydrofolate dehydrogenase A... [more]
BETB_RHOSK1.182e-4843.58Betaine aldehyde dehydrogenase OS=Rhodobacter spha... [more]
YLX7_SCHPO2.017e-4845.45Putative aldehyde dehydrogenase-like protein C922.... [more]
ALDH2_LEITA3.440e-4842.86Aldehyde dehydrogenase, mitochondrial OS=Leishmani... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16500 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-54_G10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908372 ID=DR908372; Name=DR908372; organism=Citrus sinensis; type=EST; length=655bp
ACCTCTCTTGATTTTTGATGATGTTGATGTAAACACAGCTGCAGACATGG
CGCTTCTGGGCATCCTGTTTAACAAGGGAGAAATTTGTGTGGCAAGTTCT
CGTGTTTATGTCCAGGAAGGAATTTATGATGAATTTGAAAAGAAGTTGGT
CGAAAAGGCAAAAGCTTGGGTAGTTGGTGATCCTTTTGATCCTGCAGTTC
GTCAAGGACCCCAGGTCGATAAGAAGCAGTTCGATAGAATTCTTTCGTAC
ATTGAGCATGGCAAGAGGGAAGGAGCCACATTGTTAACAGGGGGTAAGCC
TATCGGCAAGAAGGGGTATTATATTGAGCCTACAATTTTCACAAATGTTA
CGGAAGACATGCTGATAGCAAAGAATGAAATTTTCGGACCTGTGATGGCA
TTGATGAAATTCAAGACTGTTGAGGAGGCAATTAAGAGTGCAAATAATAC
CAGATATGGCCTAGCAGCAGGCATTATGACAAAGGACTTGAATGTGGCTA
ATACCGTCTCTAGATCAATTCGAGCAGGCATTATATGGATCAATTGTTAT
TTTGCTTTTGACAGCGACTGCCCTTACGGAGGATACAAGATGAGTGGATT
TGGTAGAGACTGTGGACTGGAATCTCTACATAACTATCTGCAGGTCAAGT
CCGTT
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