DR908369

Overview
NameDR908369
Unique NameDR908369
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length655
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908369 vs. ExPASy Swiss-Prot
Match: VA0D2_CHICK (V-type proton ATPase subunit d 2 OS=Gallus gallus GN=ATP6V0D2 PE=2 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 1.236e-67
Identity = 104/189 (55.03%), Postives = 145/189 (76.72%), Query Frame = 3
Query:    3 NIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLEDFYKFCQ 569
            N+  GYLE +VRG++AG+LT+ADY NL QCETL+D+K+HL  T+YG +L NE  PL  +TI +K   KL+ E+ +    A EPL+TFL +ITY +MIDN++L++TGTLH+R + EL+ KCHPLG F+ +  +++A N  EL+  +LVDTPLA +F +C++  DLD+MN+EIMRN LYK+YLE FYKFC+
Sbjct:   10 NVDHGYLEGLVRGFKAGILTSADYVNLAQCETLEDLKLHLQTTDYGNFLANESGPLTISTIDDKLKTKLLTEFHYFRNHAFEPLTTFLNFITYSYMIDNIILLITGTLHQRPIAELVPKCHPLGSFEQMEAVSIASNPTELFNAILVDTPLAAFFQDCLSENDLDEMNVEIMRNKLYKSYLEAFYKFCE 198          

HSP 2 Score: 40.4318 bits (93), Expect = 1.236e-67
Identity = 20/27 (74.07%), Postives = 21/27 (77.78%), Query Frame = 2
Query:  575 GGATAEIMSDLLAFEADRRAVNITINS 655
            GG TAEIM  +L FEADRRA  ITINS
Sbjct:  201 GGTTAEIMKPILEFEADRRAFIITINS 227          
BLAST of DR908369 vs. ExPASy Swiss-Prot
Match: VA0D2_XENTR (V-type proton ATPase subunit d 2 OS=Xenopus tropicalis GN=atp6v0d2 PE=2 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 2.277e-63
Identity = 97/189 (51.32%), Postives = 141/189 (74.60%), Query Frame = 3
Query:    3 NIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLEDFYKFCQ 569
            N+  GYLE +VRG++ G+L + DY NL QCETL+D+K+HL +T+YG +L NE   L  + I ++   KL+ E+ +    A EPL+TFL++ITY +MIDN++L++TGTLH+R + EL+ KCHPLG F+ +  + +AQ   EL+  ++VDTPLA +F +C++  D+D+MNIEIMRN LYK+YLE FYKFC+
Sbjct:    9 NVDSGYLEGLVRGFKGGILRSTDYLNLAQCETLEDLKLHLQSTDYGSFLANETRQLTVSIIDQRLKDKLMAEFHYFRNHAFEPLATFLDFITYSYMIDNIILLITGTLHQRPISELVPKCHPLGSFEQMEAVNIAQTPAELFNAIIVDTPLADFFQDCLSENDMDEMNIEIMRNKLYKSYLEAFYKFCK 197          

HSP 2 Score: 40.0466 bits (92), Expect = 2.277e-63
Identity = 20/29 (68.97%), Postives = 22/29 (75.86%), Query Frame = 2
Query:  569 ELGGATAEIMSDLLAFEADRRAVNITINS 655
            +LGG T EIM  +L FEADRRA  ITINS
Sbjct:  198 KLGGTTEEIMCPILEFEADRRAFVITINS 226          
BLAST of DR908369 vs. ExPASy Swiss-Prot
Match: VA0D_NEUCR (V-type proton ATPase subunit d OS=Neurospora crassa GN=vma-6 PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 5.045e-63
Identity = 99/187 (52.94%), Postives = 139/187 (74.33%), Query Frame = 3
Query:    3 NIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLEDFYKF 563
            N++ GY+E IVRGYR  LLT+ +Y N+ QCE++DD+K+ L    YG +L + P    T+ +  K T KLV E++++   A   L+ F++Y+TYG+MIDNV L++TGTLHERD +ELLE+CHPLG F+++  L VA N+ ELY  V+++TPLAPYF   ++ +DLD++NIEI+RNTLYK YLEDFY F
Sbjct:    7 NVNNGYIEGIVRGYRNSLLTSTNYTNMTQCESIDDLKLQLGPA-YGDFLASLPPKPSTSALAAKTTDKLVSEFRYVRANAAGSLAKFMDYLTYGYMIDNVALLITGTLHERDTRELLERCHPLGWFETMPVLCVATNIEELYNSVMIETPLAPYFKSSLSLQDLDELNIEIVRNTLYKNYLEDFYHF 192          

HSP 2 Score: 44.2838 bits (103), Expect = 5.045e-63
Identity = 20/27 (74.07%), Postives = 24/27 (88.89%), Query Frame = 2
Query:  575 GGATAEIMSDLLAFEADRRAVNITINS 655
            G  TAE+MS+LL FEADRRA+NIT+NS
Sbjct:  201 GTPTAEVMSELLEFEADRRAINITLNS 227          
BLAST of DR908369 vs. ExPASy Swiss-Prot
Match: VA0D_SCHPO (V-type proton ATPase subunit d OS=Schizosaccharomyces pombe GN=vma6 PE=2 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 7.171e-62
Identity = 101/189 (53.44%), Postives = 147/189 (77.78%), Query Frame = 3
Query:    3 NIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLEDFYKFCQ 569
            N + GY+EA+VRGY + LL    Y+NL QCE+L+D ++ LS+T+YG +L N+ S L ++ I  K T KL+DE+  +  QA E LS F++YITY +MIDN++L++TGT++ +D  +LLE+CHPLG F+++  L VA N+ ELY +VL++TPLAPYF +C++++DLD+ +IEI+RNTLYKAYLEDFY FC+
Sbjct:    7 NTNSGYIEALVRGYESALLEQHIYSNLSQCESLEDFRLQLSSTDYGGFLANQ-SKLTSSIISAKATEKLLDEFDLIRRQADETLSKFMDYITYAYMIDNIMLLLTGTVNGQDTHDLLERCHPLGWFETLPALCVATNVEELYSVVLIETPLAPYFKDCLSADDLDEQHIEIIRNTLYKAYLEDFYNFCK 194          

HSP 2 Score: 38.1206 bits (87), Expect = 7.171e-62
Identity = 17/29 (58.62%), Postives = 22/29 (75.86%), Query Frame = 2
Query:  569 ELGGATAEIMSDLLAFEADRRAVNITINS 655
            ++G  TA+ M  +L FEADRRA+ ITINS
Sbjct:  195 KIGACTADTMLPILEFEADRRAITITINS 223          
BLAST of DR908369 vs. ExPASy Swiss-Prot
Match: VA0D2_MOUSE (V-type proton ATPase subunit d 2 OS=Mus musculus GN=Atp6v0d2 PE=2 SV=2)

HSP 1 Score: 206.068 bits (523), Expect = 8.411e-57
Identity = 93/190 (48.95%), Postives = 136/190 (71.58%), Query Frame = 3
Query:    3 NIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLEDFYKFCQN 572
            N+  GYLE +VRG +A LLT  DY NL QCETL+D+K+HL  T+YG +L NE +PL  + I  +   KL  E+ +    + EPLSTFL Y+T  +MIDN++L++ G L ++ V+E+L KCHPLG F  +  + +A+   +L++ VLV+TPLAP+F +C++   LD++NIE++RN LYK+YLE FYKFC++
Sbjct:   10 NVDHGYLEGLVRGCKASLLTQQDYVNLVQCETLEDLKIHLQTTDYGNFLANETNPLTVSKIDTEMRKKLCREFDYFRNHSLEPLSTFLTYMTCSYMIDNIILLMNGALQKKSVKEVLAKCHPLGRFTEMEAVNIAETPSDLFKAVLVETPLAPFFQDCMSENTLDELNIELLRNKLYKSYLEAFYKFCKD 199          

HSP 2 Score: 35.8094 bits (81), Expect = 8.411e-57
Identity = 16/27 (59.26%), Postives = 21/27 (77.78%), Query Frame = 2
Query:  575 GGATAEIMSDLLAFEADRRAVNITINS 655
            G  TA++M  +L FEADRRA+ IT+NS
Sbjct:  201 GDVTADVMCPILEFEADRRALIITLNS 227          
BLAST of DR908369 vs. ExPASy Swiss-Prot
Match: VA0D_YEAST (V-type proton ATPase subunit d OS=Saccharomyces cerevisiae GN=VMA6 PE=1 SV=2)

HSP 1 Score: 219.935 bits (559), Expect = 8.947e-57
Identity = 103/202 (50.99%), Postives = 148/202 (73.27%), Query Frame = 3
Query:    3 NIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEK-CTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECI-TSEDLDDMNIEIMRNTLYKAYLEDFYKFCQNWVVQQLRSCL 602
            NI  G++E +VRGYR GLL+   Y NL QC+TL+D+K+ LS+T+YG +L +  S   TT+++++  + KL  E+ ++  Q++     F++YITYG+MIDNV L++TGT+H+RD  E+L++CHPLG FD++ TL+VA ++  LY  VLVDTPLAPYF  C  T+E+LDDMNIEI+RN LYKAYLEDFY F    + +  + C+
Sbjct:    7 NIDNGFIEGVVRGYRNGLLSNNQYINLTQCDTLEDLKLQLSSTDYGNFLSSVSSESLTTSLIQEYASSKLYHEFNYIRDQSSGSTRKFMDYITYGYMIDNVALMITGTIHDRDKGEILQRCHPLGWFDTLPTLSVATDLESLYETVLVDTPLAPYFKNCFDTAEELDDMNIEIIRNKLYKAYLEDFYNFVTEEIPEPAKECM 208          
BLAST of DR908369 vs. ExPASy Swiss-Prot
Match: VA0D2_RAT (V-type proton ATPase subunit d 2 OS=Rattus norvegicus GN=Atp6v0d2 PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 1.097e-56
Identity = 92/190 (48.42%), Postives = 136/190 (71.58%), Query Frame = 3
Query:    3 NIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLEDFYKFCQN 572
            N+  GYLE +VRG +A LLT  DY NL QCETL+D+K+HL  T+YG +L +E +PL  + I  +   KL  E+ +    + EPLSTF  Y+T  +MIDN++L++ G L ++ V+E+L KCHPLG F  +  + +A++  EL++ VLV+TPLAP+F +C++   LD++NIE++RN LYK+YLE FYKFC++
Sbjct:   10 NVDHGYLEGLVRGCKASLLTQQDYVNLVQCETLEDLKIHLQTTDYGNFLAHETNPLTVSKIDTEMRKKLCREFDYFRNHSLEPLSTFFTYMTCSYMIDNIILLMNGALQKKSVKEVLAKCHPLGRFTEMEAVNIAESASELFKAVLVETPLAPFFQDCMSENTLDELNIELLRNKLYKSYLEAFYKFCKD 199          

HSP 2 Score: 36.965 bits (84), Expect = 1.097e-56
Identity = 17/27 (62.96%), Postives = 21/27 (77.78%), Query Frame = 2
Query:  575 GGATAEIMSDLLAFEADRRAVNITINS 655
            G  TAE+M  +L FEADRRA+ IT+NS
Sbjct:  201 GDVTAEVMCPILEFEADRRALIITLNS 227          
BLAST of DR908369 vs. ExPASy Swiss-Prot
Match: VA0D2_HUMAN (V-type proton ATPase subunit d 2 OS=Homo sapiens GN=ATP6V0D2 PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 1.864e-56
Identity = 91/190 (47.89%), Postives = 135/190 (71.05%), Query Frame = 3
Query:    3 NIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLEDFYKFCQN 572
            N+  GYLE +VRG +A LLT  DY NL QCETL+D+K+HL  T+YG +L N  +PL  + I  +   +L  E+++    + EPLSTFL Y+T  +MIDNV+L++ G L ++ V+E+L KCHPLG F  +  + +A+   +L+  +L++TPLAP+F +C++   LD++NIE++RN LYK+YLE FYKFC+N
Sbjct:   10 NVDHGYLEGLVRGCKASLLTQQDYINLVQCETLEDLKIHLQTTDYGNFLANHTNPLTVSKIDTEMRKRLCGEFEYFRNHSLEPLSTFLTYMTCSYMIDNVILLMNGALQKKSVKEILGKCHPLGRFTEMEAVNIAETPSDLFNAILIETPLAPFFQDCMSENALDELNIELLRNKLYKSYLEAFYKFCKN 199          

HSP 2 Score: 36.1946 bits (82), Expect = 1.864e-56
Identity = 17/27 (62.96%), Postives = 20/27 (74.07%), Query Frame = 2
Query:  575 GGATAEIMSDLLAFEADRRAVNITINS 655
            G  TAE+M  +L FEADRRA  IT+NS
Sbjct:  201 GDVTAEVMCPILEFEADRRAFIITLNS 227          
BLAST of DR908369 vs. ExPASy Swiss-Prot
Match: VA0D2_PONAB (V-type proton ATPase subunit d 2 OS=Pongo abelii GN=ATP6V0D2 PE=2 SV=2)

HSP 1 Score: 200.675 bits (509), Expect = 2.643e-55
Identity = 89/190 (46.84%), Postives = 135/190 (71.05%), Query Frame = 3
Query:    3 NIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLEDFYKFCQN 572
            N+  GYLE +VRG +A LLT  DY NL QCETL+D+K+HL  T+YG +L N+ +PL  + I  +   +L  E+++    + EPLSTFL Y+T  +MIDNV+ ++ G L ++ V+E+L KCHPLG F  +  + +A+   +L+  +L++TPLAP+F +C++   L+++NIE++RN LYK+YLE FYKFC+N
Sbjct:   10 NVDHGYLEGLVRGCKASLLTQQDYINLVQCETLEDLKIHLQTTDYGNFLANQTNPLTVSKIDTEMRKRLCGEFEYFRNHSLEPLSTFLTYMTCSYMIDNVIPLMNGALQKKSVKEILGKCHPLGRFTEMEAVNIAETPSDLFNAILIETPLAPFFQDCMSENALNELNIELLRNKLYKSYLEAFYKFCKN 199          

HSP 2 Score: 36.1946 bits (82), Expect = 2.643e-55
Identity = 17/27 (62.96%), Postives = 20/27 (74.07%), Query Frame = 2
Query:  575 GGATAEIMSDLLAFEADRRAVNITINS 655
            G  TAE+M  +L FEADRRA  IT+NS
Sbjct:  201 GDVTAEVMCPILEFEADRRAFIITLNS 227          
BLAST of DR908369 vs. ExPASy Swiss-Prot
Match: VA0D2_BOVIN (V-type proton ATPase subunit d 2 OS=Bos taurus GN=ATP6V0D2 PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 2.643e-55
Identity = 91/190 (47.89%), Postives = 132/190 (69.47%), Query Frame = 3
Query:    3 NIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLEDFYKFCQN 572
            N   GYLE +VRG +AGLLT  DY NL QCE L+D+K+HL  T+YG +L N+ +PL  + I  +   KL  E+++    + EPLSTF  Y+T  +MIDNV+L++ G L  + V+++L KCHPLG F  +  + +A+   +L+  +LV+TPLAP+F +C +   LD++NIEI+RN LYK+Y+E FYKFC+N
Sbjct:   10 NADHGYLEGLVRGCKAGLLTRRDYVNLVQCENLEDLKIHLQTTDYGNFLANQATPLTVSVIDTEMRKKLCREFEYFRNHSLEPLSTFFTYMTCSYMIDNVILLMNGALQNKPVKDVLVKCHPLGHFTEMEAVNIAETPSDLFNAILVETPLAPFFQDCTSENALDELNIEILRNKLYKSYIEAFYKFCKN 199          

HSP 2 Score: 36.1946 bits (82), Expect = 2.643e-55
Identity = 17/27 (62.96%), Postives = 20/27 (74.07%), Query Frame = 2
Query:  575 GGATAEIMSDLLAFEADRRAVNITINS 655
            G  TAE+M  +L FEADRRA  IT+NS
Sbjct:  201 GDVTAEVMCPILEFEADRRAFIITLNS 227          
The following BLAST results are available for this feature:
BLAST of DR908369 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
VA0D2_CHICK1.236e-6755.03V-type proton ATPase subunit d 2 OS=Gallus gallus ... [more]
VA0D2_XENTR2.277e-6351.32V-type proton ATPase subunit d 2 OS=Xenopus tropic... [more]
VA0D_NEUCR5.045e-6352.94V-type proton ATPase subunit d OS=Neurospora crass... [more]
VA0D_SCHPO7.171e-6253.44V-type proton ATPase subunit d OS=Schizosaccharomy... [more]
VA0D2_MOUSE8.411e-5748.95V-type proton ATPase subunit d 2 OS=Mus musculus G... [more]
VA0D_YEAST8.947e-5750.99V-type proton ATPase subunit d OS=Saccharomyces ce... [more]
VA0D2_RAT1.097e-5648.42V-type proton ATPase subunit d 2 OS=Rattus norvegi... [more]
VA0D2_HUMAN1.864e-5647.89V-type proton ATPase subunit d 2 OS=Homo sapiens G... [more]
VA0D2_PONAB2.643e-5546.84V-type proton ATPase subunit d 2 OS=Pongo abelii G... [more]
VA0D2_BOVIN2.643e-5547.89V-type proton ATPase subunit d 2 OS=Bos taurus GN=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16497 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-32_F11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908369 ID=DR908369; Name=DR908369; organism=Citrus sinensis; type=EST; length=655bp
TTAACATACACGGCGGATACTTGGAGGCGATCGTGAGGGGCTACCGTGCG
GGGCTCTTGACGGCCGCCGATTACAACAATTTGTGCCAGTGCGAAACACT
TGACGACATCAAGATGCACCTCTCCGCCACCGAATATGGTCCTTACCTCC
AAAACGAACCTTCCCCATTGCATACTACAACAATTGTGGAGAAATGCACT
CTGAAACTGGTTGATGAGTATAAGCACATGCTGTGCCAAGCCACTGAGCC
CCTGTCAACATTTTTAGAGTATATCACATATGGTCACATGATAGACAATG
TTGTCTTGATTGTTACTGGAACCTTGCATGAGAGAGATGTTCAAGAACTG
TTGGAGAAATGTCACCCTTTGGGCATGTTTGACAGCATTGCTACACTGGC
GGTTGCTCAGAACATGCGGGAGCTTTATAGATTGGTGCTTGTTGACACAC
CATTAGCACCATACTTTTCTGAATGTATCACATCAGAGGACTTGGATGAC
ATGAACATTGAAATAATGAGGAATACTCTCTACAAGGCATACCTAGAAGA
CTTTTACAAGTTTTGTCAGAACTGGGTGGTGCAACAGCTGAGATCATGTC
TGACCTTCTAGCTTTTGAGGCCGACAGAAGAGCTGTCAATATCACCATAA
ACAGC
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