DR908360

Overview
NameDR908360
Unique NameDR908360
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length658
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908360 vs. ExPASy Swiss-Prot
Match: PER27_ARATH (Peroxidase 27 OS=Arabidopsis thaliana GN=PER27 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.153e-19
Identity = 62/195 (31.79%), Postives = 96/195 (49.23%), Query Frame = 3
Query:    3 ALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQ-DYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 569
            AL GP   ++TGRRDGR S   I E  LP   D+++ ++  F + G++   LV L G H++G  HC  L +RLY      + DP+L+ ++   +  KC            +  D G+    D +Y+  +   +GL   D  L  + +TR YV +  ++    FF +F  ++  +     LTG  GEIRK C  AN
Sbjct:  133 ALEGPSWEVETGRRDGRVSN--INEVNLPSPFDNITKLISDFRSKGLNEKDLVILSGGHTIGMGHCPLLTNRLYNFTGKGDSDPSLDSEYAAKLRKKCKPT----DTTTALEMDPGSFKTFDLSYFTLVAKRRGLFQSDAALLDNSKTRAYVLQQIRTHGSMFFNDFGVSMVKMGRTGVLTGKAGEIRKTCRSAN 321          
BLAST of DR908360 vs. ExPASy Swiss-Prot
Match: PER17_ARATH (Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.153e-19
Identity = 58/194 (29.90%), Postives = 96/194 (49.48%), Query Frame = 3
Query:    9 GGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEV-----DPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDR-GTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLANK 572
            GGP   +K GR+D   +  +  +  +P    + + +++ F    +    +VAL GSHS+G+  C  ++ RLY +      DPAL P +   +   CP         + V  D   TP V DN Y+++++  +G +  D  L T+  TR YVK  ++ QD FF+ F+  +  L +    +G  GEIR  C + N+
Sbjct:  134 GGPDWEVKLGRKDSLTASQQDSDDIMPSPRANATFLIDLFERFNLSVKDMVALSGSHSIGQGRCFSIMFRLYNQSGSGKPDPALEPSYRKKLDKLCPLG-----GDENVTGDLDATPQVFDNQYFKDLVSGRGFLNSDQTLYTNLVTREYVKMFSEDQDEFFRAFAEGMVKLGDLQ--SGRPGEIRFNCRVVNR 320          
BLAST of DR908360 vs. ExPASy Swiss-Prot
Match: PER4_ARATH (Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.506e-19
Identity = 60/192 (31.25%), Postives = 97/192 (50.52%), Query Frame = 3
Query:    6 LGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY---PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL-ATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 569
            +GGP   +K GRRD   +   I ++ LP+   S++ + E F   G++   LVAL G+H++G+  C+    RLY    ++D   +         +CP    D         D+ TP   DNNYYRN++  KGL+  D  L  T   T   V + +++   F  +FS A+  + +   LTG+ G+IR++C+  N
Sbjct:  131 VGGPRYDVKVGRRDSTNAFRAIADRDLPNFRASLNDLSELFLRKGLNTRDLVALSGAHTLGQAQCLTFKGRLYDNSSDIDAGFSSTR----KRRCPVNGGDTTLAPL---DQVTPNSFDNNYYRNLMQKKGLLESDQVLFGTGASTDSIVTEYSRNPSRFASDFSAAMIKMGDIQTLTGSDGQIRRICSAVN 315          
BLAST of DR908360 vs. ExPASy Swiss-Prot
Match: PER35_ARATH (Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.506e-19
Identity = 61/194 (31.44%), Postives = 91/194 (46.91%), Query Frame = 3
Query:    3 ALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYP-----EVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 569
            A GGP   ++ GR DG  S A  +E  LP  +D++  +   F    +    ++AL  +H++G  HC K+  R++       VDP LN  +   +   CP  + DP+    +  D  TP   DN Y++N+   KGL   D  L TD R+RP V   A +   F + F  A+T L        + G IR+ C   N
Sbjct:  139 AAGGPSYEVELGRFDGLVSTASSVEGNLPGPSDNVDKLNALFTKNKLTQEDMIALSAAHTLGFAHCGKVFKRIHKFNGINSVDPTLNKAYAIELQKACPKNV-DPRIA--INMDPVTPKTFDNTYFKNLQQGKGLFTSDQVLFTDGRSRPTVNAWASNSTAFNRAFVIAMTKLGRVGVKNSSNGNIRRDCGAFN 329          
BLAST of DR908360 vs. ExPASy Swiss-Prot
Match: PER62_ARATH (Peroxidase 62 OS=Arabidopsis thaliana GN=PER62 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.569e-19
Identity = 58/184 (31.52%), Postives = 94/184 (51.09%), Query Frame = 3
Query:   33 TGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGS-HSVGRTHCVKLVHRLYPE----VDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 569
            TGRRDGR S A  +   LP  +DS+++   +F+A  ++   LV L+G  H++G   C  + +R++       DP ++   VP +   CP        V     D G+    D +Y+ N+  N+G++  DH L T   TR  V++    +  F  +F+R++  +S     TGT GEIR+VC+  N
Sbjct:  140 TGRRDGRVSLASNVNN-LPSPSDSLAIQQRKFSAFRLNTRDLVTLVGGGHTIGTAACGFITNRIFNSSGNTADPTMDQTFVPQLQRLCPQNGDGSARVDL---DTGSGNTFDTSYFINLSRNRGILQSDHVLWTSPATRSIVQEFMAPRGNFNVQFARSMVKMSNIGVKTGTNGEIRRVCSAVN 319          
BLAST of DR908360 vs. ExPASy Swiss-Prot
Match: PER5_ARATH (Peroxidase 5 OS=Arabidopsis thaliana GN=PER5 PE=2 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 2.569e-19
Identity = 60/190 (31.58%), Postives = 95/190 (50.00%), Query Frame = 3
Query:    6 LGGPYIPLKTGRRDGRKS-RAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL-ATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 569
            +GGP   +K GRRD   + +A      LP   D++  +   F+  G++   LVAL G+H++G++ C     RLY E    ++         +CP    D         D  TP   DNNYY+N++  KGL++ D  L  +   T   V + +K++  F  +F+ A+  +    PLTG+ GEIRK+C+  N
Sbjct:  136 VGGPKWAVKVGRRDSTAAFKALANSGELPGFKDTLDQLSGLFSKKGLNTRDLVALSGAHTIGQSQCFLFRDRLY-ENSSDIDAGFASTRKRRCPTVGGDGNLAAL---DLVTPNSFDNNYYKNLMQKKGLLVTDQVLFGSGASTDGIVSEYSKNRSKFAADFATAMIKMGNIEPLTGSNGEIRKICSFVN 321          
BLAST of DR908360 vs. ExPASy Swiss-Prot
Match: PER56_ARATH (Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.355e-19
Identity = 58/195 (29.74%), Postives = 95/195 (48.72%), Query Frame = 3
Query:    3 ALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQ-DYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 569
            AL GP   ++TGRRDG  +        LP   +++S ++ +F + G+D   LV L G H++G  HC ++ +RLY      + DP L+ ++   +  KC            +  D G+    D +Y++ +   +GL   D  L  ++ T+ YV K   S    FFK+F  ++  +     LTG  GE+RK C + N
Sbjct:  139 ALNGPSWEVETGRRDGLVTNITEALLNLPSPFNNISSLITQFQSKGLDKKDLVVLSGGHTIGNGHCPQITNRLYNFTGKGDSDPNLDTEYAVKLRGKCKPT----DTTTALEMDPGSFKTFDESYFKLVSQRRGLFQSDAALLDNQETKSYVLKSLNSDGSTFFKDFGVSMVKMGRIGVLTGQVGEVRKKCRMVN 329          
BLAST of DR908360 vs. ExPASy Swiss-Prot
Match: PER4_VITVI (Peroxidase 4 OS=Vitis vinifera GN=GSVIVT00023967001 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.355e-19
Identity = 57/188 (30.32%), Postives = 87/188 (46.28%), Query Frame = 3
Query:    6 LGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 569
            LGGP   +K GRRD + +        +P    S+S ++ +F A G+    +VAL G+H++G+  C     R+Y E +  ++          CP A            D  TP   DN YY+N+++ KGL+  D  L     T   VK    +   F  +F   +  + +  PLTG++GEIRK C   N
Sbjct:  137 LGGPDWDVKLGRRDSKTASLSGANNNIPPPTSSLSNLISKFQAQGLSTRDMVALSGAHTIGQARCTSFRARIYNETN--IDSSFAKTRQASCPSASGSGDN-NLAPLDLQTPTTFDNYYYKNLINQKGLLHSDQVLYNGGSTDSTVKTYVNNPKTFTSDFVAGMIKMGDITPLTGSEGEIRKSCGKVN 321          
BLAST of DR908360 vs. ExPASy Swiss-Prot
Match: PERA2_ARMRU (Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.382e-19
Identity = 59/190 (31.05%), Postives = 90/190 (47.37%), Query Frame = 3
Query:    9 GGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL--ATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVC 557
            GGP   +  GRRD   +        +P   + +S +  +F+A+G++   LVAL G+H+ GR  C    +RL+        DP LN   +  +   CP    +  A      D  TP   DNNY+ N+  N GL+  D +L       T   V   A +Q  FF+ F++++  +   +PLTG+ GEIR  C
Sbjct:  113 GGPSWTVLLGRRDSLTANLAGANSAIPSPFEGLSNITSKFSAVGLNTNDLVALSGAHTFGRARCGVFNNRLFNFSGTNGPDPTLNSTLLSSLQQLCPQ---NGSASTITNLDLSTPDAFDNNYFANLQSNNGLLQSDQELFSTLGSATIAVVTSFASNQTLFFQAFAQSMINMGNISPLTGSNGEIRLDC 299          
BLAST of DR908360 vs. ExPASy Swiss-Prot
Match: PER34_ARATH (Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 7.475e-19
Identity = 69/205 (33.66%), Postives = 96/205 (46.83%), Query Frame = 3
Query:    9 GGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPG-LVALLGSHSVGRTHCVKLVHRLYPEV-----DPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL-----ATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLANK---LHD 581
            GGP   +  GRRD  ++  E+    LP    ++  +   F  +G+D P  LVAL G H+ G+  C  ++ RLY        DP LN  ++  +   CP        V +   D  TP V DN YY N+ + KGL+  D +L     ATD  T P V+  A     FF  F  A+  +    P TGT+G+IR  C + N    LHD
Sbjct:  143 GGPSWRVPLGRRDSLQAFLELANANLPAPFFTLPQLKASFRNVGLDRPSDLVALSGGHTFGKNQCQFILDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNRSALVDF---DLRTPTVFDNKYYVNLKERKGLIQSDQELFSSPNATD--TIPLVRAYADGTQTFFNAFVEAMNRMGNITPTTGTQGQIRLNCRVVNSNSLLHD 342          
The following BLAST results are available for this feature:
BLAST of DR908360 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER27_ARATH1.153e-1931.79Peroxidase 27 OS=Arabidopsis thaliana GN=PER27 PE=... [more]
PER17_ARATH1.153e-1929.90Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=... [more]
PER4_ARATH1.506e-1931.25Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 ... [more]
PER35_ARATH1.506e-1931.44Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=... [more]
PER62_ARATH2.569e-1931.52Peroxidase 62 OS=Arabidopsis thaliana GN=PER62 PE=... [more]
PER5_ARATH2.569e-1931.58Peroxidase 5 OS=Arabidopsis thaliana GN=PER5 PE=2 ... [more]
PER56_ARATH3.355e-1929.74Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=... [more]
PER4_VITVI3.355e-1930.32Peroxidase 4 OS=Vitis vinifera GN=GSVIVT0002396700... [more]
PERA2_ARMRU4.382e-1931.05Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1... [more]
PER34_ARATH7.475e-1933.66Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16488 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-56_B07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908360 ID=DR908360; Name=DR908360; organism=Citrus sinensis; type=EST; length=658bp
TTGCGCTTGGAGGCCCTTACATTCCTCTCAAGACAGGAAGAAGAGATGGT
AGAAAAAGCAGAGCAGAGATACTTGAGCAGTATCTCCCAGATCACAACGA
CAGCATGTCTGTTGTTCTTGAGAGGTTTGCAGCCATTGGCATTGACGCCC
CTGGACTTGTTGCTCTGCTAGGATCTCACAGTGTTGGCAGAACTCATTGT
GTGAAGCTGGTGCACCGTCTGTACCCAGAAGTTGACCCTGCACTGAACCC
TGACCATGTTCCGCATATGCTCCATAAGTGTCCTGATGCAATCCCAGACC
CCAAGGCTGTTCAGTATGTGAGGAATGACCGTGGCACACCCATGGTGCTG
GACAACAACTACTATAGGAACATATTGGACAACAAGGGCTTGATGATGGT
TGATCATCAGCTAGCCACCGACAAGAGGACAAGACCTTATGTTAAGAAGA
TGGCCAAGAGTCAAGACTACTTCTTCAAGGAATTTTCAAGAGCCATTACT
CTCCTTTCTGAGAACAACCCTCTCACAGGTACAAAGGGTGAGATCCGAAA
GGTTTGCAATCTTGCCAACAAGCTCCACGACAAGTCCTAGCTAGCTAACA
GCTGTATTAGCTACACAAGTTAATAGCTCCAAATTTTTCTTCCTTGTTTC
TTCTATGA
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