DR908360

Overview
NameDR908360
Unique NameDR908360
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length658
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908360 vs. ExPASy Swiss-Prot
Match: PER10_ARATH (Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 6.996e-17
Identity = 53/190 (27.89%), Postives = 90/190 (47.37%), Query Frame = 3
Query:    9 GGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIP--DPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVC 557
            GGP+ P+  GRRD   +  +     LP   +++  +  +F  +G+D   +V L G+H++G   C  + HRL+      + DP L       +L K  D  P  D    +    D  + +  DN YY N+++N GL+  D  L TD      VK  +++   F ++F+ ++  +     +TG+ G IR  C
Sbjct:  159 GGPFWPVPLGRRDSLTASEQAANTNLPSPFEALENITAKFVTLGLDLKDVVVLSGAHTIGFAQCFVIKHRLFNFKGSGQPDPNLAASSA--LLSKLKDTCPNVDSSDSKLAALDAASSVKFDNAYYVNLMNNIGLLDSDQTLMTDPTAAALVKSYSENPYLFSRDFAVSMVKMGNIGVMTGSDGVIRGKC 346          
BLAST of DR908360 vs. ExPASy Swiss-Prot
Match: PER11_ARATH (Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 9.137e-17
Identity = 54/197 (27.41%), Postives = 99/197 (50.25%), Query Frame = 3
Query:    6 LGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYP--EVDPALNP---DHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDK---RTRPYVKKMAKSQDYFFKEFSRAITLLSE-NNPLTGTKGEIRKVCNLAN 569
            +GGPY  +  GR+D + +  E+    LP   + +  ++ +F + G+    +VAL+G+H++G+  C     R+Y   +V  ALNP    ++  +   CP +  +  +      D  TP + DN+ Y  +L  +GL+  D ++ T     +TR  V K A+    FF++FS+++  +    N  +   GE+R+ C   N
Sbjct:  140 VGGPYWDVPVGRKDSKTASYELATTNLPTPEEGLISIIAKFYSQGLSVEDMVALIGAHTIGKAQCRNFRSRIYGDFQVTSALNPVSETYLASLREICPASSGEGDS-NVTAIDNVTPNLFDNSIYHTLLRGEGLLNSDQEMYTSLFGIQTRRIVSKYAEDPVAFFEQFSKSMVKMGNILNSESLADGEVRRNCRFVN 335          
BLAST of DR908360 vs. ExPASy Swiss-Prot
Match: PER70_MAIZE (Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.193e-16
Identity = 56/189 (29.63%), Postives = 87/189 (46.03%), Query Frame = 3
Query:    3 ALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 569
            ALGGP   +  GRRD   +   +    LP  +  ++ +   FA   +    LVAL G+H++G   C      +Y + +  +N          CP A  +         D  TP   DN YY N+L  +GL+  D QL     T   V+  A +   F ++F+ A+  +   +PLTGT+G+IR+ C+  N
Sbjct:  136 ALGGPSWRVLLGRRDSTTASLALANSDLPAPSLDLANLTAAFAKKRLSRTDLVALSGAHTIGLAQCKNFRAHIYNDTN--VNAAFATLRRANCPAAAGNGDG-NLAPLDTATPTAFDNAYYTNLLAQRGLLHSDQQLFNGGATDGLVRTYASTPRRFSRDFAAAMIRMGNISPLTGTQGQIRRACSRVN 321          
BLAST of DR908360 vs. ExPASy Swiss-Prot
Match: PER28_ARATH (Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.193e-16
Identity = 60/192 (31.25%), Postives = 97/192 (50.52%), Query Frame = 3
Query:    9 GGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEV-----DPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 569
            GGP   + TGRRDG  S  E   + LP    S+  +L  F   G++    VALLG+H+VG   C   V R+         DP+++P     + + C  A+P   A    ++   TP+  DN ++  I + KG++++D  +A+D  T   V + A + + F ++F+ A+  +   + LTG+ GEIR  C   N
Sbjct:  133 GGPSYVVPTGRRDGFVSNPEDANEILPPPFISVEGMLSFFGNKGMNVFDSVALLGAHTVGIASCGNFVDRVTNFQGTGLPDPSMDPTLAGRLRNTC--AVPGGFAA-LDQSMPVTPVSFDNLFFGQIRERKGILLIDQLIASDPATSGVVLQYASNNELFKRQFAIAMVKMGAVDVLTGSAGEIRTNCRAFN 321          
BLAST of DR908360 vs. ExPASy Swiss-Prot
Match: PER24_ARATH (Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.193e-16
Identity = 59/186 (31.72%), Postives = 88/186 (47.31%), Query Frame = 3
Query:   33 TGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLT--GTKGEIRKVCNLAN 569
            TGR DGR S A    + LP    + + + + FA   +D   LVAL G+H++G  HC     RL       + DP+LNP +   +  +C D          V  D   P+  D+ Y+ ++L NKGL   D  L TD  +  ++  + ++   F  +F R++  +S    LT     GEIRK C L N
Sbjct:  166 TGRVDGRVSLATEAARDLPSAGANFTTLQKLFAESDLDVVDLVALSGAHTIGIAHCGVFGRRLLNFTGKGDTDPSLNPSYASFLKSECSDKSLRLNPSAVVGMDPTGPLAFDSGYFVSLLKNKGLFTSDAALLTDP-SAAHIASVFQNSGAFLAQFGRSMIKMSSIKVLTLGDQGGEIRKNCRLVN 350          
BLAST of DR908360 vs. ExPASy Swiss-Prot
Match: PER8_ARATH (Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.659e-16
Identity = 59/189 (31.22%), Postives = 89/189 (47.09%), Query Frame = 3
Query:    9 GGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGS-HSVGRTHCVKLVHRLY-PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 569
            GGP   ++TGRRDG +S    ++   P    S++  ++ F +IG +   +VAL+G  H+VG  HC     R+  P++D  L        L K      DP        D+ TP  +DN  YR ++  + ++ +D  L  D  TR  V   A +   F + F+ A+  + E   LTG  GEIR  C   N
Sbjct:  132 GGPKFKVRTGRRDGLRSNPSDVKLLGP--TVSVATSIKAFKSIGFNVSTMVALIGGGHTVGVAHCSLFQDRIKDPKMDSKLRAK-----LKKSCRGPNDPSVFM----DQNTPFRVDNEIYRQMIQQRAILRIDDNLIRDGSTRSIVSDFAYNNKLFKESFAEAMQKMGEIGVLTGDSGEIRTNCRAFN 309          
BLAST of DR908360 vs. ExPASy Swiss-Prot
Match: PER66_MAIZE (Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.659e-16
Identity = 56/185 (30.27%), Postives = 84/185 (45.41%), Query Frame = 3
Query:    3 ALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVC 557
            ALGGP   +  GRRD   S A      LP    S+  +L  +    ++   +VAL G+H++G+  C      +Y + +  +N      +   CP A     +      D  TP   DN YY N+L  KGL+  D +L     T   V+  A S   F   F+ A+  +   +P TGT+G+IR+ C
Sbjct:  138 ALGGPSWTVLLGRRDSTASFAGQTSD-LPPPTSSLGQLLSAYNKKNLNPTDMVALSGAHTIGQAQCSSFNDHIYNDTN--INSAFAASLRANCPRA----GSTALAPLDTTTPNAFDNAYYTNLLSQKGLLHSDQELFNSGSTDSTVRSFASSTSAFNSAFATAMVKMGNLSPQTGTQGQIRRSC 315          
BLAST of DR908360 vs. ExPASy Swiss-Prot
Match: PER67_ARATH (Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.472e-16
Identity = 55/189 (29.10%), Postives = 94/189 (49.74%), Query Frame = 3
Query:    6 LGGPYIPLKTGRRDGRKSR-AEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 569
            LGGP   +K GRRD   +  A      +P    ++S ++ RF A G+    +VAL G+H++GR  CV   +R+Y   +  ++          CP A       +    D  +P   D+ +Y+ +L  KGL+  D  L  +  T   V   + + + F+++F+RA+  + + +PLTG+ G+IR+ C   N
Sbjct:  131 LGGPGWSVKLGRRDSTTANFAAANSGVIPPPITTLSNLINRFKAQGLSTRDMVALSGAHTIGRAQCVTFRNRIYNASN--IDTSFAISKRRNCP-ATSGSGDNKKANLDVRSPDRFDHGFYKQLLSKKGLLTSDQVLFNNGPTDSLVIAYSHNLNAFYRDFARAMIKMGDISPLTGSNGQIRQNCRRPN 316          
BLAST of DR908360 vs. ExPASy Swiss-Prot
Match: PER30_ARATH (Peroxidase 30 OS=Arabidopsis thaliana GN=PER30 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.472e-16
Identity = 55/194 (28.35%), Postives = 93/194 (47.94%), Query Frame = 3
Query:    3 ALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAK-SQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLA 566
            A GGP   + TGRRDGR S        +P    + + +   F   G++   LV L G+H++G +HC  +  RLY      + DP+L+  +  ++      ++ D   +  +  D G+    D +YYR +L  +GL   D  L T+  T   +  +   S+  FFK F++++  +      TG+ G IR  C++A
Sbjct:  136 ATGGPSWSVPTGRRDGRISNKTEATNNIPPPTSNFTTLQRLFKNQGLNLKDLVLLSGAHTIGVSHCSSMNTRLYNFSTTVKQDPSLDSQYAANLKANKCKSLNDNSTI--LEMDPGSSRSFDLSYYRLVLKRRGLFQSDSALTTNSATLKVINDLVNGSEKKFFKAFAKSMEKMGRVKVKTGSAGVIRTRCSVA 327          
BLAST of DR908360 vs. ExPASy Swiss-Prot
Match: PERX_TOBAC (Lignin-forming anionic peroxidase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 5.923e-16
Identity = 57/194 (29.38%), Postives = 90/194 (46.39%), Query Frame = 3
Query:   12 GPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPD------HVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL--ATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 569
            GP   +  GR+D   +        +P   ++++V++ +F   G+D   LVAL G+H+ GR  C     RL+   + + NPD       +  +   CP          +   D  TP   DN+Y+ N+  N+GL+  D +L   +   T   V + A SQ  FF +F  ++  L   +PLTGT G+IR  C   N
Sbjct:  134 GPSWQVLFGRKDSLTANRSGANSDIPSPFETLAVMIPQFTNKGMDLTDLVALSGAHTFGRARCGTFEQRLF-NFNGSGNPDLTVDATFLQTLQGICPQG--GNNGNTFTNLDISTPNDFDNDYFTNLQSNQGLLQTDQELFSTSGSATIAIVNRYAGSQTQFFDDFVSSMIKLGNISPLTGTNGQIRTDCKRVN 324          
The following BLAST results are available for this feature:
BLAST of DR908360 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER10_ARATH6.996e-1727.89Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=... [more]
PER11_ARATH9.137e-1727.41Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=... [more]
PER70_MAIZE1.193e-1629.63Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1[more]
PER28_ARATH1.193e-1631.25Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=... [more]
PER24_ARATH1.193e-1631.72Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=... [more]
PER8_ARATH2.659e-1631.22Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 ... [more]
PER66_MAIZE2.659e-1630.27Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1[more]
PER67_ARATH3.472e-1629.10Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=... [more]
PER30_ARATH3.472e-1628.35Peroxidase 30 OS=Arabidopsis thaliana GN=PER30 PE=... [more]
PERX_TOBAC5.923e-1629.38Lignin-forming anionic peroxidase OS=Nicotiana tab... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16488 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-56_B07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908360 ID=DR908360; Name=DR908360; organism=Citrus sinensis; type=EST; length=658bp
TTGCGCTTGGAGGCCCTTACATTCCTCTCAAGACAGGAAGAAGAGATGGT
AGAAAAAGCAGAGCAGAGATACTTGAGCAGTATCTCCCAGATCACAACGA
CAGCATGTCTGTTGTTCTTGAGAGGTTTGCAGCCATTGGCATTGACGCCC
CTGGACTTGTTGCTCTGCTAGGATCTCACAGTGTTGGCAGAACTCATTGT
GTGAAGCTGGTGCACCGTCTGTACCCAGAAGTTGACCCTGCACTGAACCC
TGACCATGTTCCGCATATGCTCCATAAGTGTCCTGATGCAATCCCAGACC
CCAAGGCTGTTCAGTATGTGAGGAATGACCGTGGCACACCCATGGTGCTG
GACAACAACTACTATAGGAACATATTGGACAACAAGGGCTTGATGATGGT
TGATCATCAGCTAGCCACCGACAAGAGGACAAGACCTTATGTTAAGAAGA
TGGCCAAGAGTCAAGACTACTTCTTCAAGGAATTTTCAAGAGCCATTACT
CTCCTTTCTGAGAACAACCCTCTCACAGGTACAAAGGGTGAGATCCGAAA
GGTTTGCAATCTTGCCAACAAGCTCCACGACAAGTCCTAGCTAGCTAACA
GCTGTATTAGCTACACAAGTTAATAGCTCCAAATTTTTCTTCCTTGTTTC
TTCTATGA
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