DR908356

Overview
NameDR908356
Unique NameDR908356
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length659
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908356 vs. ExPASy Swiss-Prot
Match: AKC1H_MOUSE (Aldo-keto reductase family 1 member C18 OS=Mus musculus GN=Akr1c18 PE=2 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.188e-16
Identity = 55/156 (35.26%), Postives = 85/156 (54.49%), Query Frame = 1
Query:   13 YPSEQPLGEALTEALRLGLVQSGDELFITSKLWLTDSYRGRVIPGLQKTLKTLGLEYLDLYLVHFPVSLILEATCPVKPED------IRSFDYEGVWEEMEKCQELGPTKKKGVSNFTCKKLERLL-ATMLLQKFILLSIRCY*VVLPAKGECHCE 459
            Y +E+ +G+A+   +  G V+  D +F TSKLW T      V P L+ +L+ L L+Y+DLYL+HFPVS  L+    + P+D        + D    WE MEKC++ G  K  GVSNF  ++LE +L    L  K +   + C+  +  +K   +C+
Sbjct:   55 YQNEEEIGQAILSKIEDGTVKRED-IFYTSKLWSTSHRPELVRPSLENSLRKLNLDYVDLYLIHFPVS--LKPGNELLPKDEHGNLIFDTVDLCDTWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHLYLNQSKLLAYCK 207          
BLAST of DR908356 vs. ExPASy Swiss-Prot
Match: AK1CO_HORSE (Aldo-keto reductase family 1 member C23-like protein OS=Equus caballus GN=PGFS PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.188e-16
Identity = 51/130 (39.23%), Postives = 77/130 (59.23%), Query Frame = 1
Query:    1 TAAAYPSEQPLGEALTEALRLGLVQSGDELFITSKLWLTDSYRGRVIPGLQKTLKTLGLEYLDLYLVHFPVSLILEATCPVKPED------IRSFDYEGVWEEMEKCQELGPTKKKGVSNFTCKKLERLL 372
            +A +Y +E+ +G+A+   +  G V+  D +F TSKLWLT      V P L+K+L  L L+Y+DLY++HFP++  L+    + PED        + D    WE MEKC++ G  K  GVSNF  ++LE +L
Sbjct:   51 SAYSYNNEKEVGQAIRSKIEDGTVKRED-IFYTSKLWLTFLRPELVRPALEKSLTNLQLDYVDLYIIHFPIA--LKPGEELFPEDEHGKLIFDTVDLCATWEAMEKCKDAGLAKSIGVSNFNRRQLEMIL 177          
BLAST of DR908356 vs. ExPASy Swiss-Prot
Match: DIDH_RAT (3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus GN=Akr1c9 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.552e-16
Identity = 52/136 (38.24%), Postives = 75/136 (55.15%), Query Frame = 1
Query:    1 TAAAYPSEQPLGEALTEALRLGLVQSGDELFITSKLWLTDSYRGRVIPGLQKTLKTLGLEYLDLYLVHFPVSLILEATCPVKPEDI------------RSFDYEGVWEEMEKCQELGPTKKKGVSNFTCKKLERLL 372
            +A  Y  E+ +G+A+   +  G V+  D +F TSKLW T      V   L+KTLK+  L+Y+DLY++HFP++L        +P DI             + D    WE MEKC++ G  K  GVSNF C++LER+L
Sbjct:   51 SAYLYEVEEEVGQAIRSKIEDGTVKRED-IFYTSKLWSTFHRPELVRTCLEKTLKSTQLDYVDLYIIHFPMAL--------QPGDIFFPRDEHGKLLFETVDICDTWEAMEKCKDAGLAKSIGVSNFNCRQLERIL 177          
BLAST of DR908356 vs. ExPASy Swiss-Prot
Match: PGFS2_BOVIN (Prostaglandin F synthase 2 OS=Bos taurus PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.027e-16
Identity = 51/128 (39.84%), Postives = 73/128 (57.03%), Query Frame = 1
Query:    1 TAAAYPSEQPLGEALTEALRLGLVQSGDELFITSKLWLTDSYRGRVIPGLQKTLKTLGLEYLDLYLVHFPVSLILEATCPVKPED----IRSFDYEGVWEEMEKCQELGPTKKKGVSNFTCKKLERLL 372
            +A  Y +E+ +G+A+   +  G V+  D +F TSKLW        V P L+K+L+ L L+Y+DLY++H PVSL        K E       S D    WE +EKC++ G TK  GVSNF  K+LE++L
Sbjct:   51 SAHLYQNEEQVGQAIRSKIADGTVKRED-IFYTSKLWCNSLQPELVRPALEKSLQNLQLDYVDLYIIHSPVSLKPGNKFVPKDESGKLIFDSVDLCHTWEALEKCKDAGLTKSIGVSNFNHKQLEKIL 177          
BLAST of DR908356 vs. ExPASy Swiss-Prot
Match: PGFS1_BOVIN (Prostaglandin F synthase 1 OS=Bos taurus PE=1 SV=3)

HSP 1 Score: 85.8853 bits (211), Expect = 2.027e-16
Identity = 51/128 (39.84%), Postives = 73/128 (57.03%), Query Frame = 1
Query:    1 TAAAYPSEQPLGEALTEALRLGLVQSGDELFITSKLWLTDSYRGRVIPGLQKTLKTLGLEYLDLYLVHFPVSLILEATCPVKPED----IRSFDYEGVWEEMEKCQELGPTKKKGVSNFTCKKLERLL 372
            +A  Y +E+ +G+A+   +  G V+  D +F TSKLW        V P L+K+L+ L L+Y+DLY++H PVSL        K E       S D    WE +EKC++ G TK  GVSNF  K+LE++L
Sbjct:   51 SAHLYQNEEQVGQAIRSKIADGTVKRED-IFYTSKLWCNSLQPELVRPALEKSLQNLQLDYVDLYIIHSPVSLKPGNKFVPKDESGKLIFDSVDLCHTWEALEKCKDAGLTKSIGVSNFNHKQLEKIL 177          
BLAST of DR908356 vs. ExPASy Swiss-Prot
Match: AK1CN_HORSE (Aldo-keto reductase family 1 member C23 OS=Equus caballus GN=AKR1C23 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.027e-16
Identity = 52/127 (40.94%), Postives = 74/127 (58.27%), Query Frame = 1
Query:    4 AAAYPSEQPLGEALTEALRLGLVQSGDELFITSKLWLTDSYRGRVIPGLQKTLKTLGLEYLDLYLVHFPVSLIL-EATCPVKPEDIRSFDYE---GVWEEMEKCQELGPTKKKGVSNFTCKKLERLL 372
            A  Y +E+ +G A+   ++ G V+  D +F TSKLW T      V P L+K+LK L L+Y+DLY++HFPV++   E   P   +    FD       WE MEKC++ G TK  GVSNF  ++LE +L
Sbjct:   52 AHLYDNEKEVGLAIRSKIQDGTVKRED-IFCTSKLWATSLRLQLVRPALEKSLKNLQLDYVDLYIIHFPVAVKPGEEHLPQDEQGRMIFDTVDLCATWEAMEKCKDAGLTKSIGVSNFNRRQLEMIL 177          
BLAST of DR908356 vs. ExPASy Swiss-Prot
Match: ALRA_DICDI (Aldose reductase A OS=Dictyostelium discoideum GN=alrA PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.647e-16
Identity = 49/125 (39.20%), Postives = 69/125 (55.20%), Query Frame = 1
Query:    4 AAAYPSEQPLGEALTEALRLGLVQSGDELFITSKLWLTDSYRGRVIPGLQKTLKTLGLEYLDLYLVHFPVSLILEATCPVKPEDIRSF-DYEGVWEEMEKCQELGPTKKKGVSNFTCKKLERLLA 375
            AA Y +E+ +GEA T+          +++FITSKLW T   +  V P L++TL  LGL+YLDLYLVH+PV+    +         + F      WEEMEK  + G  K  G+SNF  + L  +L+
Sbjct:   46 AAVYLNEKEVGEAFTKKFTTEATVKREDVFITSKLWNTFHKKEHVRPALERTLSDLGLQYLDLYLVHWPVAFEYTSNDIQTSGSTQEFVSIRETWEEMEKLVDAGLVKSIGLSNFNVQGLMEVLS 170          
BLAST of DR908356 vs. ExPASy Swiss-Prot
Match: AK1A1_PIG (Alcohol dehydrogenase [NADP+] OS=Sus scrofa GN=AKR1A1 PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 2.647e-16
Identity = 52/156 (33.33%), Postives = 85/156 (54.49%), Query Frame = 1
Query:    4 AAAYPSEQPLGEALTEALRLGLVQSGDELFITSKLWLTDSYRGRVIPGLQKTLKTLGLEYLDLYLVHFPVSLIL-EATCPVKPEDIRSFD---YEGVWEEMEKCQELGPTKKKGVSNFTCKKLERLLATMLLQKFILLSIRCY*VVLPAKGECHCE 459
            AA Y +E  +GEALTE +  G     +ELF+TSKLW T  +   V P L+KTL  L LEYLDLYL+H+P +    +   P   +    +D   Y+  W+ +E     G  +  G+SNF+ ++++ +L+   ++  + L + C+  +   +   HC+
Sbjct:   47 AAIYGNELEIGEALTETVGPGKAVPREELFVTSKLWNTKHHPEDVEPALRKTLADLQLEYLDLYLMHWPYAFERGDNPFPKNADGTIRYDATHYKDTWKALEALVAKGLVRALGLSNFSSRQIDDVLSVASVRPAV-LQVECHPYLAQNELIAHCQ 201          
BLAST of DR908356 vs. ExPASy Swiss-Prot
Match: AK1C4_MACFU (Aldo-keto reductase family 1 member C4 OS=Macaca fuscata fuscata GN=AKR1C4 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 5.898e-16
Identity = 51/128 (39.84%), Postives = 74/128 (57.81%), Query Frame = 1
Query:    1 TAAAYPSEQPLGEALTEALRLGLVQSGDELFITSKLWLTDSYRGRVIPGLQKTLKTLGLEYLDLYLVHFPVSLILEATCPVKPED----IRSFDYEGVWEEMEKCQELGPTKKKGVSNFTCKKLERLL 372
            +A  Y +E+ +G A+   +  G V+  D +F TSKLW T      V P L+ +LK L L+Y+DLYL+HFP++L    T   K E+      + D   +WE MEKC++ G  K  GVSNF  ++LE +L
Sbjct:   51 SAYLYNNEEQVGLAIRSKIADGSVKRED-IFYTSKLWCTFFRPQLVQPALESSLKKLQLDYVDLYLIHFPMALKPGETPLPKDENGKVMFDTVDLCAIWEAMEKCKDAGLAKSIGVSNFNRRQLEMIL 177          
BLAST of DR908356 vs. ExPASy Swiss-Prot
Match: AK1C4_MACFA (Aldo-keto reductase family 1 member C4 OS=Macaca fascicularis GN=AKR1C4 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 5.898e-16
Identity = 51/128 (39.84%), Postives = 74/128 (57.81%), Query Frame = 1
Query:    1 TAAAYPSEQPLGEALTEALRLGLVQSGDELFITSKLWLTDSYRGRVIPGLQKTLKTLGLEYLDLYLVHFPVSLILEATCPVKPED----IRSFDYEGVWEEMEKCQELGPTKKKGVSNFTCKKLERLL 372
            +A  Y +E+ +G A+   +  G V+  D +F TSKLW T      V P L+ +LK L L+Y+DLYL+HFP++L    T   K E+      + D   +WE MEKC++ G  K  GVSNF  ++LE +L
Sbjct:   51 SAYLYNNEEQVGLAIRSKIADGSVKRED-IFYTSKLWCTFFRPQLVQPALESSLKKLQLDYVDLYLIHFPMALKPGETPLPKDENGKVMFDTVDLCAIWEAMEKCKDAGLAKSIGVSNFNRRQLEMIL 177          
The following BLAST results are available for this feature:
BLAST of DR908356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
AKC1H_MOUSE1.188e-1635.26Aldo-keto reductase family 1 member C18 OS=Mus mus... [more]
AK1CO_HORSE1.188e-1639.23Aldo-keto reductase family 1 member C23-like prote... [more]
DIDH_RAT1.552e-1638.243-alpha-hydroxysteroid dehydrogenase OS=Rattus nor... [more]
PGFS2_BOVIN2.027e-1639.84Prostaglandin F synthase 2 OS=Bos taurus PE=2 SV=1[more]
PGFS1_BOVIN2.027e-1639.84Prostaglandin F synthase 1 OS=Bos taurus PE=1 SV=3[more]
AK1CN_HORSE2.027e-1640.94Aldo-keto reductase family 1 member C23 OS=Equus c... [more]
ALRA_DICDI2.647e-1639.20Aldose reductase A OS=Dictyostelium discoideum GN=... [more]
AK1A1_PIG2.647e-1633.33Alcohol dehydrogenase [NADP+] OS=Sus scrofa GN=AKR... [more]
AK1C4_MACFU5.898e-1639.84Aldo-keto reductase family 1 member C4 OS=Macaca f... [more]
AK1C4_MACFA5.898e-1639.84Aldo-keto reductase family 1 member C4 OS=Macaca f... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16484 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-56_B08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908356 ID=DR908356; Name=DR908356; organism=Citrus sinensis; type=EST; length=659bp
ACTGCTGCAGCTTACCCATCCGAGCAACCTCTTGGCGAAGCATTAACTGA
AGCTTTACGTCTTGGCCTCGTTCAATCCGGCGACGAGCTTTTCATCACCT
CAAAACTCTGGCTCACCGACTCCTATCGCGGCCGTGTCATCCCGGGCCTA
CAAAAAACTCTCAAGACTCTTGGATTGGAGTACCTTGATCTCTATCTAGT
TCATTTTCCGGTAAGCTTGATTCTAGAGGCGACGTGTCCTGTGAAACCGG
AGGATATTCGTTCATTTGACTATGAGGGTGTTTGGGAGGAAATGGAGAAA
TGTCAAGAGCTAGGTCCTACAAAAAAAAAAGGAGTAAGTAACTTTACATG
CAAGAAACTTGAGAGGTTACTTGCTACAATGCTACTGCAAAAATTCATCC
TGCTGTCAATCAGGTGCTATTAGGTGGTTTTACCAGCAAAGGGTGAGTGT
CATTGTGAAGAGCTTTAATAAAGAACGAATGGAACAAACCTTGACATATT
TGACTGGGAGCTAAGTGCGGAAGAGCTTCAAAAGACAGAACAAATTCTGC
AGTGCAGAGGAAGCCGTGCTGAGCGTACCTATCAGAGAATGGTCCTTTCA
GAACTGTGGAGGAAATATGGGATGGAGAAATTTAATATAATAGTATGCCT
TTGTTTTCT
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