DR908353

Overview
NameDR908353
Unique NameDR908353
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length659
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908353 vs. ExPASy Swiss-Prot
Match: E13B_TOBAC (Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform OS=Nicotiana tabacum PE=1 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 1.267e-26
Identity = 70/192 (36.46%), Postives = 106/192 (55.21%), Query Frame = 1
Query:    1 GQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEVM-ISNDQNLISQLLPAMTNMQNALNAASLGGKIKVSTVHAMSVLAQSDPPSSGSFIRQDT---MRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLF 564
            G + +NLP      +L +S +I +LRLY  +   ++AL  + + +++G  + D+  +AS    A  W+  NV  F+P  KI  I VGNE+  ++    L S L PAM N+  A+  A LG  IKVST   M+++  S PPS GSF R D       I+ FL+D  +P  +N YP+F+Y  +P   +L + LF
Sbjct:   41 GMLGNNLPNHWEVIQLYKSRNIGRLRLYDPNHGALQALKGSNIEVMLGLPNSDVKHIASGMEHARWWVQKNVKDFWPDVKIKYIAVGNEISPVTGTSYLTSFLTPAMVNIYKAIGEAGLGNNIKVSTSVDMTLIGNSYPPSQGSF-RNDARWFTDPIVGFLRDTRAPLLVNIYPYFSYSGNPGQISLPYSLF 231          
BLAST of DR908353 vs. ExPASy Swiss-Prot
Match: E13B_SOLLC (Glucan endo-1,3-beta-glucosidase B OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.654e-26
Identity = 67/192 (34.90%), Postives = 107/192 (55.73%), Query Frame = 1
Query:    1 GQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEVM-ISNDQNLISQLLPAMTNMQNALNAASLGGKIKVSTVHAMSVLAQSDPPSSGSFIRQDT---MRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLF 564
            G + +NLP  +   +L +S +I++LRLY  +   + AL  + + +++G  + D+  ++S    A  W+  NV  F+P  KI  I VGNE+  ++   NL    +PA+ N+  A+  A LG  IKVST   M+++  S PPS GSF R D       I+ FL+D  +P  +N YP+F+Y  +P   +L + LF
Sbjct:   32 GMMGNNLPSHSEVIQLYKSRNIRRLRLYDPNHGALNALRGSNIEVILGLPNVDVKHISSGMEHARWWVQKNVRDFWPHVKIKYIAVGNEISPVTGTSNLAPFQVPALVNIYKAIGEAGLGNDIKVSTSVDMTLIGNSYPPSQGSF-RNDVRWFTDPIVGFLRDTRAPLLVNIYPYFSYSGNPGQISLPYALF 222          
BLAST of DR908353 vs. ExPASy Swiss-Prot
Match: E13B_MAIZE (Glucan endo-1,3-beta-glucosidase, acidic isoform OS=Zea mays PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.654e-26
Identity = 75/188 (39.89%), Postives = 101/188 (53.72%), Query Frame = 1
Query:    1 GQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEVMISNDQNLISQLLPAMTNMQNALNAASLGGKIKVSTVHAMSVLAQSDPPSSGSFIRQDTMRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLF 564
            G   DNLPP +   +L QS  I  LR+Y  D   + AL+ T +G+++   + D+ +LASDP+AA  W+ SNV      S    I VGNEV   +       +LPAM N+  AL  A LGG IKVST    S + Q  PPS G+F  Q  M    Q+L+  G+P   N YP+F+Y  +P    L + LF
Sbjct:   35 GVNGDNLPPASDVVQLYQSNGINLLRIYFPDANPLNALSGTSIGLIMDVPNTDLASLASDPSAAAAWVQSNV-QASRRSACRYIAVGNEVSGGD----TGSILPAMQNLNAALANAGLGGSIKVSTA-VQSDVTQGFPPSQGTF-SQGYMAPSRQYLQSTGAPLLSNVYPYFSYVGNPAQIDLKYALF 215          
BLAST of DR908353 vs. ExPASy Swiss-Prot
Match: E132_SOLTU (Glucan endo-1,3-beta-glucosidase, basic isoform 2 OS=Solanum tuberosum GN=GLUB2 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.654e-26
Identity = 68/192 (35.42%), Postives = 107/192 (55.73%), Query Frame = 1
Query:    1 GQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEVM-ISNDQNLISQLLPAMTNMQNALNAASLGGKIKVSTVHAMSVLAQSDPPSSGSFIRQDT---MRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLF 564
            G + +NLP  +   +L +S +I +LRLY  +   + AL  + + +++G  + D+  +AS    A  W+  NV  F+P  KI  I VGNE+  ++   +L S  +PA+ N+  A+  A LG  IKVST   M+++  S PPS GSF R D       I+ FL+D  +P  +N YP+F+Y  +P   +L + LF
Sbjct:   32 GMMGNNLPSHSEVIQLYKSRNIGRLRLYDPNQGALNALRGSNIEVILGLPNVDVKHIASGMEHARWWVQKNVKDFWPDVKIKYIAVGNEISPVTGTSSLTSFQVPALVNIYKAVGEAGLGNDIKVSTSVDMTLIGNSYPPSQGSF-RNDVRWFTDPIVGFLRDTRAPLLVNIYPYFSYSGNPGQISLPYALF 222          
BLAST of DR908353 vs. ExPASy Swiss-Prot
Match: E131_SOLTU (Glucan endo-1,3-beta-glucosidase, basic isoform 1 (Fragment) OS=Solanum tuberosum GN=GLUB1 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.161e-26
Identity = 68/192 (35.42%), Postives = 107/192 (55.73%), Query Frame = 1
Query:    1 GQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEVM-ISNDQNLISQLLPAMTNMQNALNAASLGGKIKVSTVHAMSVLAQSDPPSSGSFIRQDT---MRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLF 564
            G + +NLP  +   +L +S +I +LRLY  +   + AL  + + +++G  + D+  +AS    A  W+  NV  F+P  KI  I VGNE+  ++   +L S  +PA+ N+  A+  A LG  IKVST   M+++  S PPS GSF R D       I+ FL+D  +P  +N YP+F+Y  +P   +L + LF
Sbjct:    6 GMMGNNLPSHSEVIQLYKSRNIGRLRLYDPNHGALNALRGSNIEVILGLPNVDVKHIASGMEHARWWVQKNVKDFWPDVKIKYIAVGNEISPVTGTSSLTSFQVPALVNIYKAVGEAGLGNDIKVSTSVDMTLIGNSYPPSQGSF-RNDVRWFTDPIVGFLRDTRAPLLVNIYPYFSYSGNPGQISLPYALF 196          
BLAST of DR908353 vs. ExPASy Swiss-Prot
Match: EA6_ARATH (Probable glucan endo-1,3-beta-glucosidase A6 OS=Arabidopsis thaliana GN=A6 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.686e-26
Identity = 66/191 (34.55%), Postives = 106/191 (55.50%), Query Frame = 1
Query:    1 GQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEVMISNDQNLISQLLPAMTNMQNALNAASLGGKIKVSTVHAMSVLAQSDPPSSGSFIRQDT---MRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLF 564
            G+  +NLP P  +   ++S     ++LY ADP  +  L+ T + + I   +  I AL+S+   A +W+ +N+LP+YP ++I  + VGNE++  N  N+   L+PAM  + N+L    +   IKV T  AM  L  S PPS+G+F  + T   M  +L+FL    S F +N +P+F +  +P   +L F LF
Sbjct:   47 GRRGNNLPSPYQSINFIKSIKAGHVKLYDADPESLTLLSQTNLYVTITVPNHQITALSSNQTIADEWVRTNILPYYPQTQIRFVLVGNEILSYNSGNVSVNLVPAMRKIVNSLRLHGI-HNIKVGTPLAMDSLRSSFPPSNGTFREEITGPVMLPLLKFLNGTNSYFFLNVHPYFRWSRNPMNTSLDFALF 236          
BLAST of DR908353 vs. ExPASy Swiss-Prot
Match: E13E_HORVU (Glucan endo-1,3-beta-glucosidase GV OS=Hordeum vulgare PE=2 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 3.686e-26
Identity = 70/178 (39.33%), Postives = 97/178 (54.49%), Query Frame = 1
Query:    1 GQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGD-IPALASDPNAATQWINSNVLPFYPASKIILITVGNEVMISNDQNLISQLLPAMTNMQNALNAASLGGKIKVSTVHAMSVLAQSDPPSSGSFIRQDTMRGILQFLKDHGSPFTINPYPFFAYQSD 531
            G V DNLP  +   +L +S +I  +R+Y  D   + AL  +G+ +++     D +  L  DP+ A  W+ SNV  +YP   I  I VGNEV  + D  +I   L AM N+ NAL +A+L   IKVST     V+  S PPSSG F     +  I +FL   G+PF  N YP+FAY+ D
Sbjct:   10 GMVGDNLPSRSDVVQLYKSRNIHAMRIYNPDQEALTALRGSGIFLILDVGGVDEVRRLGRDPSYAAGWVRSNVQAYYPDVLIRYIAVGNEVP-AGDTGII---LLAMQNVHNALASANLSSSIKVSTAVRFDVITNSFPPSSGVFRDPSGLVPIARFLDSTGAPFLANVYPYFAYRDD 183          
BLAST of DR908353 vs. ExPASy Swiss-Prot
Match: E13C_HORVU (Glucan endo-1,3-beta-glucosidase GIII OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 4.814e-26
Identity = 74/191 (38.74%), Postives = 102/191 (53.40%), Query Frame = 1
Query:    1 GQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEVMISNDQNLISQLLPAMTNMQNALNAASLGGKIKVSTVHAMSVLAQSDPPSSGSFI-RQDTMRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFHP 570
            G + +NLP P+    L +S  I  +R+Y  +  ++ AL+ TG+ +++      +P+LAS P+AA  W+ +NV  F P      I V NEVM S  Q   S +LPAM N+Q AL AA  G  IKVST     V   + PPS+G    +   +R IL FL     P   N YP+FAY+ +PR   L F  F P
Sbjct:   31 GVLGNNLPAPSDVVTLYRSKRIDAMRIYEPESKVLTALSGTGIAVLMDVGPA-LPSLASSPSAAAAWVKANVSSF-PGVSFRYIAVRNEVMDSAGQ---STILPAMRNVQRALAAA--GSPIKVSTSVRFDVFNNTSPPSNGVLADKSGFLRPILNFLARPARPLLANVYPYFAYKGNPRDIQLTFATFVP 214          
BLAST of DR908353 vs. ExPASy Swiss-Prot
Match: E133_SOLTU (Glucan endo-1,3-beta-glucosidase, basic isoform 3 (Fragment) OS=Solanum tuberosum GN=GLUB3 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.072e-25
Identity = 67/188 (35.64%), Postives = 105/188 (55.85%), Query Frame = 1
Query:   13 DNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEVM-ISNDQNLISQLLPAMTNMQNALNAASLGGKIKVSTVHAMSVLAQSDPPSSGSFIRQDT---MRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLF 564
            +NLP  +   +L +S +I +LRLY  +   + AL  + + +++G  + D+  +AS    A  W+  NV  F+P  KI  I VGNE+  ++   +L S  +PA+ N+  A+  A LG  IKVST   M+++  S PPS GSF R D       I+ FL+D  +P  +N YP+F+Y  +P   +L + LF
Sbjct:    1 NNLPSHSEVIQLYKSRNIGRLRLYDPNHGALNALRGSNIEVILGLPNVDVKHIASGMEHARWWVQKNVKDFWPDVKIKYIAVGNEISPVTGTSSLTSFQVPALVNIYKAIGEAGLGNDIKVSTSVDMTLIGNSYPPSQGSF-RNDVRWFTDPIVGFLRDTRAPLLVNIYPYFSYSGNPGQISLPYALF 187          
BLAST of DR908353 vs. ExPASy Swiss-Prot
Match: E13B_PRUPE (Glucan endo-1,3-beta-glucosidase, basic isoform OS=Prunus persica GN=GNS1 PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.401e-25
Identity = 69/190 (36.32%), Postives = 106/190 (55.79%), Query Frame = 1
Query:    1 GQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEVMISNDQNLISQLLPAMTNMQNALNAASLGGKIKVSTVHAMSVLAQSDPPSSGSFIRQ--DTMRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLF 564
            G V D+LPP A    L ++ +I ++RLY  +PA ++AL  + + +++G  + ++  +A     A  W+ +NV   Y   K   I VGNEV  S+  +    L+PAM N+Q A++ A L  KIKVST     VL ++ PPS GSF  +    +  I++FL  H SP  +N YP+FAY  + +   L + LF
Sbjct:   45 GMVGDDLPPQAEVVALYKTNNIPRMRLYDPNPAALEALRGSNIKLLLGVPNENLQYIALSQANANAWVQNNVRN-YANVKFKYIAVGNEVKPSD--SFAQFLVPAMRNIQEAISLAGLAKKIKVSTAIDTGVLGETFPPSIGSFKSEYNALLYPIIRFLVSHQSPLLVNLYPYFAYSGNTQDIRLDYALF 231          
The following BLAST results are available for this feature:
BLAST of DR908353 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
E13B_TOBAC1.267e-2636.46Glucan endo-1,3-beta-glucosidase, basic vacuolar i... [more]
E13B_SOLLC1.654e-2634.90Glucan endo-1,3-beta-glucosidase B OS=Solanum lyco... [more]
E13B_MAIZE1.654e-2639.89Glucan endo-1,3-beta-glucosidase, acidic isoform O... [more]
E132_SOLTU1.654e-2635.42Glucan endo-1,3-beta-glucosidase, basic isoform 2 ... [more]
E131_SOLTU2.161e-2635.42Glucan endo-1,3-beta-glucosidase, basic isoform 1 ... [more]
EA6_ARATH3.686e-2634.55Probable glucan endo-1,3-beta-glucosidase A6 OS=Ar... [more]
E13E_HORVU3.686e-2639.33Glucan endo-1,3-beta-glucosidase GV OS=Hordeum vul... [more]
E13C_HORVU4.814e-2638.74Glucan endo-1,3-beta-glucosidase GIII OS=Hordeum v... [more]
E133_SOLTU1.072e-2535.64Glucan endo-1,3-beta-glucosidase, basic isoform 3 ... [more]
E13B_PRUPE1.401e-2536.32Glucan endo-1,3-beta-glucosidase, basic isoform OS... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16481 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-43_B08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908353 ID=DR908353; Name=DR908353; organism=Citrus sinensis; type=EST; length=659bp
GGCCAAGTAGCGGATAACCTGCCCCCGCCGGCGGCTACAGCGAAGCTTCT
GCAATCGACTTCTATACAGAAATTGAGGCTCTACGGTGCAGATCCGGCCA
TCATCAAAGCACTAGCAAACACTGGGGTCGGTATTGTAATTGGCGCTTCC
AGTGGAGATATTCCGGCTCTCGCTTCTGATCCCAACGCCGCTACTCAGTG
GATCAACTCAAACGTGTTGCCTTTTTACCCCGCCAGCAAAATCATTCTCA
TCACCGTTGGGAATGAGGTGATGATATCAAACGACCAAAATCTAATCAGT
CAGCTTCTCCCGGCAATGACAAATATGCAAAACGCTCTCAACGCGGCCTC
ACTGGGTGGGAAAATTAAGGTGTCAACGGTTCATGCGATGTCCGTGTTGG
CACAATCCGACCCGCCGTCCTCCGGGTCATTCATCCGCCAAGACACTATG
AGAGGGATTTTGCAGTTTCTTAAAGACCACGGCTCCCCTTTTACCATCAA
CCCGTACCCGTTTTTCGCTTACCAAAGCGACCCGAGACCCGAGACTCTTG
CCTTCTGTTTGTTTCACCCAACGCGGGACGAGTTGACTCCGGGACGGGAT
CAAGTACATGAACATGTTCGACGCCCAGGTTGATGCCGTACATTCAGCCT
TGAATGCAA
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