DR908353

Overview
NameDR908353
Unique NameDR908353
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length659
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908353 vs. ExPASy Swiss-Prot
Match: E13A_SOLLC (Glucan endo-1,3-beta-glucosidase A OS=Solanum lycopersicum PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 6.481e-23
Identity = 63/191 (32.98%), Postives = 99/191 (51.83%), Query Frame = 1
Query:    1 GQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEVMISNDQNLISQLL-PAMTNMQNALNAASLGGKIKVSTVHAMSVLAQSDPPSSGSFIRQ--DTMRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLF 564
            G++A+NLP      KL  S +I+K+R+Y  +  +  AL  + + I++   + D+ ALA +P+    W+  N+   +P  K   I VGNEV    D    ++ + PAM N+ NAL++A L  +IKVST   + +L  + PP    F  +    +  I+ FL  H  P   N YP+F +  D  P  L + LF
Sbjct:   31 GKIANNLPSDQDVIKLYNSNNIKKMRIYFPETNVFNALKGSNIEIILDVPNQDLEALA-NPSKRQGWVQDNIRNHFPDVKFKYIAVGNEVDPGRDSGKYARFVGPAMENIYNALSSAGLQNQIKVSTATYLGLLTNTYPPRDSIFRDEYKSFINPIIGFLSRHNLPLLANIYPYFGHADDNVP--LPYALF 218          

HSP 2 Score: 24.6386 bits (52), Expect = 6.481e-23
Identity = 15/34 (44.12%), Postives = 20/34 (58.82%), Query Frame = 2
Query:  548 LPSVCFTQRGTS*LRDGIKYMNMFDAQVDAVHSA 649
            LP   F Q+G   L D   Y N+FDA VD+++ A
Sbjct:  213 LPYALFKQQG---LNDA-GYQNLFDALVDSMYFA 242          
BLAST of DR908353 vs. ExPASy Swiss-Prot
Match: E13C_TOBAC (Glucan endo-1,3-beta-glucosidase OS=Nicotiana tabacum GN=SP41A PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 6.506e-23
Identity = 63/191 (32.98%), Postives = 102/191 (53.40%), Query Frame = 1
Query:    1 GQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEVMISNDQNLISQLLPAMTNMQNALNAASLGGKIKVSTVHAMSVLAQSDPPSSGSFIRQ--DTMRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFH 567
            G++A+NLP       L ++  I+K+R+Y +D  I K+L  + + I++   + D+ ALA+  + A  W+  N+   +P  K   I++GNEV  SN+      LL AM N+ NAL AA L  KIKV+T     +LA + PP    F  +    +  I++FL  +  P   N YP+F +  +     L++ LF+
Sbjct:   41 GKIANNLPSEQDVINLYKANGIRKMRIYNSDTNIFKSLNGSNIEIILDVPNQDLEALANS-SIANGWVQDNIRSHFPYVKFKYISIGNEVSPSNNGQYSQFLLHAMENVYNALAAAGLQDKIKVTTATYSGLLANTYPPKDSIFREEFKSFINPIIEFLARNNLPLLANIYPYFGHIYNTVDVPLSYALFN 230          
BLAST of DR908353 vs. ExPASy Swiss-Prot
Match: E13B_BRACM (Glucan endo-1,3-beta-glucosidase OS=Brassica campestris GN=BGL PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.921e-22
Identity = 68/207 (32.85%), Postives = 104/207 (50.24%), Query Frame = 1
Query:    1 GQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEVMISNDQNLISQLLPAMTNMQNALNAASLGGKIKVSTVHAMSVLAQSDPPSSGSFIRQDTMRGILQ----FLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFHP-TRDELTPGRDQV 606
            GQ+ +N+P P+    + +  SI ++R+YG +P  + AL  + +  ++   +GD+  LA     A  W+  NV   Y   +   I+VGNEV     +   + L+ AM N+  AL+AA L   IKVST   M     + PPS G F  +D  R  LQ    FL +  SP  +N Y +F Y +  R  +L F L  P + +E T   +Q+
Sbjct:   32 GQMGNNIPNPSEVVAMFKQYSIPRMRMYGPNPDALNALRGSNIEFILDVPNGDLKRLADSQAEANTWVRDNVQK-YNDVRFKYISVGNEV--KPGEPGAAALIQAMQNIDRALSAAGL-SNIKVSTTTFMGPSRNTYPPSRGRF--KDEYRNFLQPVIGFLVNKRSPLLVNIYTYFGYMN--RDVSLQFALLQPNSNNEFTDPNNQL 230          

HSP 2 Score: 26.9498 bits (58), Expect = 6.921e-22
Identity = 9/18 (50.00%), Postives = 16/18 (88.89%), Query Frame = 2
Query:  599 IKYMNMFDAQVDAVHSAL 652
            ++Y+N FDA +D+V++AL
Sbjct:  230 LRYLNFFDANLDSVYAAL 247          
BLAST of DR908353 vs. ExPASy Swiss-Prot
Match: E13H_TOBAC (Glucan endo-1,3-beta-glucosidase, acidic isoform PR-Q' OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 3.947e-20
Identity = 58/177 (32.77%), Postives = 96/177 (54.24%), Query Frame = 1
Query:    1 GQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEVM-ISNDQNLISQLLPAMTNMQNALNAASLGGKIKVSTVHAMSVLAQSDPPSSGSF---IRQDTMRGILQFLKDHGSPFTINPYPFFA 519
            G+  + LP PA    L    +I+++R+Y  D   ++AL  + + +++G  + D+  +A+    A  W+ +NV   Y   K   I VGNEV  ++ +   +  LL AM N+Q A++ A LG +IKVST     +   + PPS+G F   +RQ  +  I+ FL  + +P  +N YP+FA
Sbjct:   31 GRQGNGLPSPADVVSLCNRNNIRRMRIYDPDQPTLEALRGSNIELMLGVPNPDLENVAASQANADTWVQNNVRN-YGNVKFRYIAVGNEVSPLNENSKYVPVLLNAMRNIQTAISGAGLGNQIKVSTAIETGLTTDTSPPSNGRFKDDVRQ-FIEPIINFLVTNRAPLLVNLYPYFA 205          
BLAST of DR908353 vs. ExPASy Swiss-Prot
Match: E139_ARATH (Glucan endo-1,3-beta-glucosidase 9 OS=Arabidopsis thaliana GN=At5g58480 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.148e-19
Identity = 66/207 (31.88%), Postives = 108/207 (52.17%), Query Frame = 1
Query:    1 GQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPAS---KIILITVGNEVMISNDQNLISQ-LLPAMTNMQNALNAASLGGKIKVSTVHAM-SVLAQSDPPSSGSFIRQD---TMRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFHPTRDELTPGR 597
            G  A +  PP+   +LL+S  I K++L+ ADP +++AL+ + +G+ IG  +  + +L +    A  W++ NV  ++      +I  + VG E  + +  N     ++ A  N+QNAL  A+L  ++KV    +  S L++S  PSSG F R D   TM  +L FL  H SPF +   PF ++  + +  +L F LF  T      GR
Sbjct:   31 GTEASHPLPPSKVVELLKSNGIVKVKLFDADPKVLRALSGSNIGVTIGIQNSMLKSLNASVKVAESWVHDNVTRYFNGGNRVRIEYVAVGEEPFLQSYGNQYKPFVIGAAMNIQNALVKANLANEVKVVVPSSFDSFLSESGRPSSGHF-RADLNKTMIELLSFLTKHHSPFFVTISPFLSFHQN-KNISLDFSLFKETAKAHKDGR 235          
BLAST of DR908353 vs. ExPASy Swiss-Prot
Match: E138_ARATH (Glucan endo-1,3-beta-glucosidase 8 OS=Arabidopsis thaliana GN=At1g64760 PE=1 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 1.081e-18
Identity = 63/195 (32.31%), Postives = 99/195 (50.77%), Query Frame = 1
Query:    1 GQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNV--LPFYPASKIILITVGNEVMI-SNDQNLISQLLPAMTNMQNALNAASLGGKIKVSTVHAMSVL---AQSDPPSSGSFIRQD---TMRGILQFLKDHGSPFTINPYPFFA-YQSDPRPETLAF 555
            G +A +  PP    ++L+  +I K++L+ AD   + ALA +G+ +++   +  +  + S  + A  W+  NV    F     I  + VGNE  + S + + I+   PA+ N+QNALN A LG  +K +      V    A +  PS+G F R D    M  I+ FL  + +P TIN YPF + Y +D  P   AF
Sbjct:   30 GTMATHKLPPKTVVQMLKDNNINKVKLFDADETTMGALAGSGLEVMVAIPNDQLKVMTS-YDRAKDWVRKNVTRYNFDGGVNITFVAVGNEPFLKSYNGSFINLTFPALANIQNALNEAGLGNSVKATVPLNADVYDSPASNPVPSAGRF-RPDIIGQMTQIVDFLGKNNAPITINIYPFLSLYGNDDFPLNYAF 222          

HSP 2 Score: 25.7942 bits (55), Expect = 1.081e-18
Identity = 11/22 (50.00%), Postives = 15/22 (68.18%), Query Frame = 2
Query:  593 DGIKYMNMFDAQVDAVHSALNA 658
            +GI Y N+FDA  D + S+L A
Sbjct:  232 NGIDYTNVFDANFDTLVSSLKA 253          
BLAST of DR908353 vs. ExPASy Swiss-Prot
Match: E136_ARATH (Glucan endo-1,3-beta-glucosidase 6 OS=Arabidopsis thaliana GN=At5g58090 PE=1 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 1.828e-18
Identity = 56/184 (30.43%), Postives = 98/184 (53.26%), Query Frame = 1
Query:    1 GQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIIL--ITVGNEVMISN-DQNLISQLLPAMTNMQNALNAASLGGKIKVSTVHAMSVLAQSDP-PSSGSFIR--QDTMRGILQFLKDHGSPFTINPYPFFAYQSDP 534
            G  A +  PP    ++L+   IQK++L+ A+   ++AL  +G+ +++G  +  +  LAS   AA +W+  NV        + +  + VGNE  +S  + + +S   PA+ N+Q A+  A L  ++KV+      V   S   PS G F    +D M  I++FL ++G PFT+N YP+ +  ++P
Sbjct:   27 GTQASHPLPPDIVVRMLRENGIQKVKLFDAEYDTLRALGKSGIEVMVGIPNEMLATLASSLKAAEKWVAKNVSTHISTDNVNIRYVAVGNEPFLSTYNGSYLSTTFPALRNIQIAIIKAGLQNQVKVTCPLNADVYDSSTTFPSGGDFRANIRDLMITIVKFLSENGGPFTVNIYPYISLYTNP 210          

HSP 2 Score: 21.9422 bits (45), Expect = 1.828e-18
Identity = 10/19 (52.63%), Postives = 11/19 (57.89%), Query Frame = 2
Query:  596 GIKYMNMFDAQVDAVHSAL 652
            G  Y NMFDA  D +  AL
Sbjct:  230 GTFYYNMFDANYDTLVHAL 248          
BLAST of DR908353 vs. ExPASy Swiss-Prot
Match: E13I_TOBAC (Glucan endo-1,3-beta-glucosidase, acidic isoform PR-N (Fragment) OS=Nicotiana tabacum GN=PRN PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.513e-17
Identity = 54/166 (32.53%), Postives = 83/166 (50.00%), Query Frame = 1
Query:  100 IIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEVMISNDQNLISQLLPAMTNMQNALNAASLGGKIKVSTVHAMSVLAQSDPPSSGSFIRQ--DTMRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFHPTRDELTP 591
            +  AL  + + I++     D+ +L +DP+ A  W+  N++  +P  K   I VGN+V   N+      + PAM N+ NAL AA L  +IKVST     +LA + PP    F  +    +  I+QFL  H  P   N YP+F +  +     L++ LF  T+ E  P
Sbjct:    2 VFNALRGSNIEIILDVPLQDLQSL-TDPSRANGWVQDNIINHFPDVKFKYIAVGNKVSPGNNGQYAPFVAPAMQNVYNALAAAGLQDQIKVSTATYSGILANTYPPKDSIFRGEFNSFINPIIQFLVQHNLPLLANVYPYFGHIFNTADVPLSYALF--TQQEANP 164          

HSP 2 Score: 21.1718 bits (43), Expect = 1.513e-17
Identity = 7/16 (43.75%), Postives = 13/16 (81.25%), Query Frame = 2
Query:  605 YMNMFDAQVDAVHSAL 652
            Y N+FDA +D+++ A+
Sbjct:  167 YQNLFDALLDSMYFAV 182          
BLAST of DR908353 vs. ExPASy Swiss-Prot
Match: E13B_SOYBN (Glucan endo-1,3-beta-glucosidase (Fragment) OS=Glycine max PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.823e-15
Identity = 50/132 (37.88%), Postives = 74/132 (56.06%), Query Frame = 1
Query:  175 SDPNAATQWINSNVLPFYPASKIILITVGNEVMISNDQNLISQLLPAMTNMQNALNAASLGGKIKVSTVHAMSVLAQSDPPSSGSFI--RQDTMRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLF 564
            +D NAAT W+N  V P+        I VGNE  I  + N+   +L AMTN+QNA+++      IKVST    +++  S PP+ G F    +  ++ I+ FL  +G+P   N YP+FAY +D +   LA+ LF
Sbjct:   18 TDSNAATDWVNKYVTPYSQDVNFKYIAVGNE--IHPNTNVAQYILSAMTNIQNAISSRKF--TIKVSTAIDSTLITNSYPPNDGVFTSDAEPYIKPIINFLVSNGAPLLANVYPYFAYAND-QSIPLAYALF 144          
BLAST of DR908353 vs. ExPASy Swiss-Prot
Match: E131_ARATH (Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana GN=At1g11820 PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 4.102e-13
Identity = 45/124 (36.29%), Postives = 68/124 (54.84%), Query Frame = 1
Query:  241 IILITVGNEVMISNDQNLISQLLPAMTNMQNALNAASLGGKIKVSTVHAMSVLAQSDPPSSGSFIR--QDTMRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFHPTRDELTPGRDQV 606
            ++LI+  +  +  N  +    LLPA+ ++ NAL A++L  +IKVST HA S++  + PPS   F +     M  +LQFL   GSP  +N YP++ Y  +     L  CLF P    LTP ++ V
Sbjct:   19 LLLISANSSSLSHNVPSSAPLLLPAIESLYNALVASNLHTQIKVSTPHAASIMLDTFPPSQAYFNQTWHSIMVPLLQFLSKTGSPLMMNLYPYYVYMQNKGVVPLDNCLFEP----LTPSKEMV 138          

HSP 2 Score: 20.4014 bits (41), Expect = 4.102e-13
Identity = 7/18 (38.89%), Postives = 12/18 (66.67%), Query Frame = 2
Query:  599 IKYMNMFDAQVDAVHSAL 652
            + Y N+ DA VDA + ++
Sbjct:  144 LHYTNVLDAMVDAAYVSM 161          
The following BLAST results are available for this feature:
BLAST of DR908353 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
E13A_SOLLC6.481e-2332.98Glucan endo-1,3-beta-glucosidase A OS=Solanum lyco... [more]
E13C_TOBAC6.506e-2332.98Glucan endo-1,3-beta-glucosidase OS=Nicotiana taba... [more]
E13B_BRACM6.921e-2232.85Glucan endo-1,3-beta-glucosidase OS=Brassica campe... [more]
E13H_TOBAC3.947e-2032.77Glucan endo-1,3-beta-glucosidase, acidic isoform P... [more]
E139_ARATH1.148e-1931.88Glucan endo-1,3-beta-glucosidase 9 OS=Arabidopsis ... [more]
E138_ARATH1.081e-1832.31Glucan endo-1,3-beta-glucosidase 8 OS=Arabidopsis ... [more]
E136_ARATH1.828e-1830.43Glucan endo-1,3-beta-glucosidase 6 OS=Arabidopsis ... [more]
E13I_TOBAC1.513e-1732.53Glucan endo-1,3-beta-glucosidase, acidic isoform P... [more]
E13B_SOYBN3.823e-1537.88Glucan endo-1,3-beta-glucosidase (Fragment) OS=Gly... [more]
E131_ARATH4.102e-1336.29Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16481 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-43_B08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908353 ID=DR908353; Name=DR908353; organism=Citrus sinensis; type=EST; length=659bp
GGCCAAGTAGCGGATAACCTGCCCCCGCCGGCGGCTACAGCGAAGCTTCT
GCAATCGACTTCTATACAGAAATTGAGGCTCTACGGTGCAGATCCGGCCA
TCATCAAAGCACTAGCAAACACTGGGGTCGGTATTGTAATTGGCGCTTCC
AGTGGAGATATTCCGGCTCTCGCTTCTGATCCCAACGCCGCTACTCAGTG
GATCAACTCAAACGTGTTGCCTTTTTACCCCGCCAGCAAAATCATTCTCA
TCACCGTTGGGAATGAGGTGATGATATCAAACGACCAAAATCTAATCAGT
CAGCTTCTCCCGGCAATGACAAATATGCAAAACGCTCTCAACGCGGCCTC
ACTGGGTGGGAAAATTAAGGTGTCAACGGTTCATGCGATGTCCGTGTTGG
CACAATCCGACCCGCCGTCCTCCGGGTCATTCATCCGCCAAGACACTATG
AGAGGGATTTTGCAGTTTCTTAAAGACCACGGCTCCCCTTTTACCATCAA
CCCGTACCCGTTTTTCGCTTACCAAAGCGACCCGAGACCCGAGACTCTTG
CCTTCTGTTTGTTTCACCCAACGCGGGACGAGTTGACTCCGGGACGGGAT
CAAGTACATGAACATGTTCGACGCCCAGGTTGATGCCGTACATTCAGCCT
TGAATGCAA
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