DR908351

Overview
NameDR908351
Unique NameDR908351
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length659
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908351 vs. ExPASy Swiss-Prot
Match: DNAK_CYAPA (Chaperone protein dnaK OS=Cyanophora paradoxa GN=dnaK-A PE=3 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 3.326e-35
Identity = 77/151 (50.99%), Postives = 104/151 (68.87%), Query Frame = 3
Query:    3 GSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGASTLPNDEVQRMVQEAERFAKEDKEKRDAIDTKNQADSVVYQTEKQLKELGDKVPAXXXXXXXXXXXXXXDAIAEGSTQAMKDTMAALNQEVMQLGQSLYNQ 455
            G+FRLDGI PAPRGVPQIEV FDIDANGILSV+A DKGTGK++ ITITGASTL  DEV+RMVQEAE+ A +DKE R  I+ +NQA+S++ Q E+QLKE   K+                 A+ E + + ++     L   ++++G+ +Y++
Sbjct:  448 GTFRLDGIAPAPRGVPQIEVTFDIDANGILSVTAKDKGTGKEKSITITGASTLSQDEVERMVQEAEKNAAQDKENRQKIELRNQAESLINQAERQLKEF--KLEPNVQAPIEQTIQQLQTALKEDNLEQVQSLCQELQNSLLEIGKQVYSK 596          
BLAST of DR908351 vs. ExPASy Swiss-Prot
Match: DNAK_HALOH (Chaperone protein dnaK OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=dnaK PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 9.677e-35
Identity = 76/151 (50.33%), Postives = 97/151 (64.24%), Query Frame = 3
Query:    3 GSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGASTLPNDEVQRMVQEAERFAKEDKEKRDAIDTKNQADSVVYQTEKQLKELGDKVPAXXXXXXXXXXXXXXDAIAEGSTQAMKDTMAALNQEVMQLGQSLYNQ 455
            G F+L GIPPAPRGVPQIEVKFDIDANGI+ VSA D GTGKKQ ITI  +S L  DE+++MV +A +  +EDK++ + I+ +N+ADS+VYQTEK LKE GDKV                 A+       +K+   AL  E+ +L   LY Q
Sbjct:  426 GRFQLTGIPPAPRGVPQIEVKFDIDANGIVHVSAKDLGTGKKQQITIKSSSGLSEDEIEKMVNDARKHEEEDKKRLEEIEARNEADSLVYQTEKTLKESGDKVSKDVKDKVEKAKDELKKALEGDDVDQIKEKTEALKNELTELSSQLYAQ 576          
BLAST of DR908351 vs. ExPASy Swiss-Prot
Match: DNAK_FRAAA (Chaperone protein dnaK OS=Frankia alni (strain ACN14a) GN=dnaK PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.264e-34
Identity = 71/151 (47.02%), Postives = 102/151 (67.55%), Query Frame = 3
Query:    3 GSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGASTLPNDEVQRMVQEAERFAKEDKEKRDAIDTKNQADSVVYQTEKQLKELGDKVPAXXXXXXXXXXXXXXDAIAEGSTQAMKDTMAALNQEVMQLGQSLYNQ 455
            G F L G+PPAPRG+PQIEV FDIDANGI+ VSA D GTGK+Q +TITG S LP D++ RMV++AE++A+ED+ +R+  +T+N+A+++VY TE+ L E G+K+ A               A+A   T A+++   AL      +GQ++Y Q
Sbjct:  428 GMFELTGLPPAPRGLPQIEVTFDIDANGIVHVSAKDLGTGKEQSMTITGGSALPRDDIDRMVRDAEQYAEEDRNRREEAETRNKAETLVYSTERFLAENGEKIDAAVKSDVEEKLGTLRGAVAGTDTAAIREAADALAAASQAMGQAMYEQ 578          
BLAST of DR908351 vs. ExPASy Swiss-Prot
Match: DNAK_GEOLS (Chaperone protein dnaK OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=dnaK PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.651e-34
Identity = 75/151 (49.67%), Postives = 98/151 (64.90%), Query Frame = 3
Query:    3 GSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGASTLPNDEVQRMVQEAERFAKEDKEKRDAIDTKNQADSVVYQTEKQLKELGDKVPAXXXXXXXXXXXXXXDAIAEGSTQAMKDTMAALNQEVMQLGQSLYNQ 455
            G+F L GIPPAPRGVPQIEV FDIDANGI+ VSA D GTGK+Q I IT +S L  +E+ +MV++AE  A EDK+KR+AI+ +NQADS++Y TEK LKE+GDKV A                +     + +K     L Q   +L +++Y Q
Sbjct:  450 GNFELTGIPPAPRGVPQIEVTFDIDANGIVHVSAKDLGTGKEQSIRITASSGLSKEEIDKMVKDAESHAAEDKKKREAIEARNQADSMIYSTEKSLKEVGDKVDAVEKGTIENKIADLKKVMDSDDAEVIKKATDELAQAAHKLAEAMYAQ 600          
BLAST of DR908351 vs. ExPASy Swiss-Prot
Match: DNAK_CLOPH (Chaperone protein dnaK OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=dnaK PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.156e-34
Identity = 72/153 (47.06%), Postives = 102/153 (66.67%), Query Frame = 3
Query:    3 GSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGASTLPNDEVQRMVQEAERFAKEDKEKRDAIDTKNQADSVVYQTEKQLKELGDKVPAXXXXXXXXXXXXXXDAIAEGSTQAMK----DTMAALNQEVMQLGQSLY 449
            G FRLDGIPPA RG+PQIEV FDIDANGI++VSA D GTGK+Q ITIT  S + + ++ + V+EA  +  +DK+++DA+DT+N ADS+V+QTEK L E+GDKV A              D +A+ + + M     + M A  +++M   Q+L+
Sbjct:  428 GQFRLDGIPPARRGIPQIEVTFDIDANGIVNVSAKDLGTGKEQHITITAGSNMSDSDIDKAVREAAEYEAQDKKRKDAVDTRNDADSIVFQTEKALSEVGDKVSADEKTAVEADLNHLKDLVAKANPEVMSEGEVEDMKAAKEKLMNSAQALF 580          
BLAST of DR908351 vs. ExPASy Swiss-Prot
Match: DNAK_CARHZ (Chaperone protein dnaK OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=dnaK PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.156e-34
Identity = 72/151 (47.68%), Postives = 99/151 (65.56%), Query Frame = 3
Query:    3 GSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGASTLPNDEVQRMVQEAERFAKEDKEKRDAIDTKNQADSVVYQTEKQLKELGDKVPAXXXXXXXXXXXXXXDAIAEGSTQAMKDTMAALNQEVMQLGQSLYNQ 455
            G F L GIPPAPRGVPQIEV+FDID NGI+ VSA D GTG++Q ITIT  S L   E++RMV+EAER+A+ED+++++ ++T+NQADS++YQ EK LK+  DK                 +A+     Q M+  M  L + + +L  S+Y Q
Sbjct:  426 GRFTLTGIPPAPRGVPQIEVRFDIDVNGIVHVSAKDLGTGREQSITITNTSNLSEAEIKRMVEEAERYAEEDRKRKEEVETRNQADSLIYQAEKTLKDFKDKANPDLVARVEKAIAELREAMNSKDVQLMRAKMEELTKPLYELTSSIYQQ 576          
BLAST of DR908351 vs. ExPASy Swiss-Prot
Match: DNAK_CLONN (Chaperone protein dnaK OS=Clostridium novyi (strain NT) GN=dnaK PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 2.816e-34
Identity = 72/151 (47.68%), Postives = 99/151 (65.56%), Query Frame = 3
Query:    3 GSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGASTLPNDEVQRMVQEAERFAKEDKEKRDAIDTKNQADSVVYQTEKQLKELGDKVPAXXXXXXXXXXXXXXDAIAEGSTQAMKDTMAALNQEVMQLGQSLYNQ 455
            G F+L GI PAPRG+PQIEV FDIDANGIL+VSA DKGTGK+ +ITIT ++ L +DE+ + V+EAE+FA ED++++++++ KN ADS +YQTEK LK+LGDKV                        +A+K     L +E  ++   LY Q
Sbjct:  427 GRFQLSGIAPAPRGIPQIEVSFDIDANGILNVSAKDKGTGKEANITITASTNLSDDEIDKAVKEAEKFAAEDEKRKESVEVKNNADSALYQTEKALKDLGDKVEEADKKNVEEKLEALRQVKDGEDLEAIKKATTELTEEFYKVSSKLYQQ 577          
BLAST of DR908351 vs. ExPASy Swiss-Prot
Match: DNAK_CHLL2 (Chaperone protein dnaK OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=dnaK PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 3.677e-34
Identity = 73/149 (48.99%), Postives = 98/149 (65.77%), Query Frame = 3
Query:    3 GSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGASTLPNDEVQRMVQEAERFAKEDKEKRDAIDTKNQADSVVYQTEKQLKELGDKVPAXXXXXXXXXXXXXXDAIAEGSTQAMKDTMAALNQEVMQLGQSLY 449
            G F L  IPPAPRGVPQIEV FDID+NGILSVSA DK TGK+Q I I  +  L + E+++M Q+A+  A ED++K++ ID +N ADS+++ TEKQL ELGDK+PA              +A   G+ +++K  M  LN+E   +  SLY
Sbjct:  448 GRFHLGDIPPAPRGVPQIEVTFDIDSNGILSVSAKDKATGKEQTIRIEASGKLNDAEIEKMKQDAKEHAAEDQKKKEEIDIRNSADSLIFSTEKQLTELGDKIPADKKPRLEGSLEKLKEAYKNGTAESIKSAMDDLNKEWSDIASSLY 596          
BLAST of DR908351 vs. ExPASy Swiss-Prot
Match: DNAK_PICTO (Chaperone protein dnaK OS=Picrophilus torridus GN=dnaK PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 3.765e-34
Identity = 68/149 (45.64%), Postives = 97/149 (65.10%), Query Frame = 3
Query:    3 GSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGASTLPNDEVQRMVQEAERFAKEDKEKRDAIDTKNQADSVVYQTEKQLKELGDKVPAXXXXXXXXXXXXXXDAIAEGSTQAMKDTMAALNQEVMQLGQSLY 449
            G F LDGIPPAPRGVPQIEV FDIDANGIL+VSA D GTGK+Q I+IT  + L  DE++RM +EAE++A++DK+ ++ I+T N A+++ Y  EK + + GDK+                DAI+      +K+    L +E+ ++G  +Y
Sbjct:  431 GMFNLDGIPPAPRGVPQIEVTFDIDANGILNVSAKDLGTGKQQSISITATNKLSKDEIERMKKEAEQYAEQDKKAKEEIETINNAETLAYTAEKTINDAGDKIDESSKESVRSIVKDLRDAISSKDINKIKELSEKLTKEIQEIGTKMY 579          

HSP 2 Score: 24.6386 bits (52), Expect = 3.765e-34
Identity = 9/21 (42.86%), Postives = 15/21 (71.43%), Query Frame = 1
Query:  514 QTHPTKDRMGDVIDADFTDSK 576
            Q + +++  GD +DADF +SK
Sbjct:  593 QNNNSQNNNGDTVDADFKESK 613          
BLAST of DR908351 vs. ExPASy Swiss-Prot
Match: DNAK_MOOTA (Chaperone protein dnaK OS=Moorella thermoacetica (strain ATCC 39073) GN=dnaK PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 4.803e-34
Identity = 74/151 (49.01%), Postives = 99/151 (65.56%), Query Frame = 3
Query:    3 GSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGASTLPNDEVQRMVQEAERFAKEDKEKRDAIDTKNQADSVVYQTEKQLKELGDKVPAXXXXXXXXXXXXXXDAIAEGSTQAMKDTMAALNQEVMQLGQSLYNQ 455
            G F+L GIPPAPRGVPQIEVKFDIDANGI+ VSA D GTGK+Q ITIT +S L  +E+QRMV+EAE  A+ D+ +++ I+T+NQADS++YQ E+ LKE  DK                 + +   +   +K+ M AL+Q +  L   +Y Q
Sbjct:  426 GRFQLTGIPPAPRGVPQIEVKFDIDANGIVHVSAKDLGTGKQQAITITSSSGLSEEEIQRMVKEAEASAEADRRRKEEIETRNQADSLIYQAERTLKEFKDKADQNDVDRIEKAKKELQEVLDSKNNDKIKEKMEALSQALYTLTTKVYQQ 576          
The following BLAST results are available for this feature:
BLAST of DR908351 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_CYAPA3.326e-3550.99Chaperone protein dnaK OS=Cyanophora paradoxa GN=d... [more]
DNAK_HALOH9.677e-3550.33Chaperone protein dnaK OS=Halothermothrix orenii (... [more]
DNAK_FRAAA1.264e-3447.02Chaperone protein dnaK OS=Frankia alni (strain ACN... [more]
DNAK_GEOLS1.651e-3449.67Chaperone protein dnaK OS=Geobacter lovleyi (strai... [more]
DNAK_CLOPH2.156e-3447.06Chaperone protein dnaK OS=Clostridium phytoferment... [more]
DNAK_CARHZ2.156e-3447.68Chaperone protein dnaK OS=Carboxydothermus hydroge... [more]
DNAK_CLONN2.816e-3447.68Chaperone protein dnaK OS=Clostridium novyi (strai... [more]
DNAK_CHLL23.677e-3448.99Chaperone protein dnaK OS=Chlorobium limicola (str... [more]
DNAK_PICTO3.765e-3445.64Chaperone protein dnaK OS=Picrophilus torridus GN=... [more]
DNAK_MOOTA4.803e-3449.01Chaperone protein dnaK OS=Moorella thermoacetica (... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16479 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-30_A09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908351 ID=DR908351; Name=DR908351; organism=Citrus sinensis; type=EST; length=659bp
TTGGCAGCTTCCGTCTTGATGGCATCCCTCCAGCACCGCGTGGGGTTCCT
CAAATTGAGGTTAAATTTGACATCGATGCCAATGGTATTCTTTCTGTCTC
TGCTGTTGACAAAGGCACCGGAAAGAAACAAGACATCACCATTACTGGTG
CTAGCACTTTACCCAATGATGAGGTGCAAAGAATGGTGCAAGAAGCTGAG
AGATTTGCCAAGGAGGATAAAGAGAAAAGAGATGCTATTGACACCAAGAA
CCAGGCGGATTCTGTCGTATACCAAACGGAGAAACAGCTGAAGGAGCTGG
GAGACAAGGTTCCAGCCGAAGTGAAGGGGAAGGTCGAAGGAAAACTCAAG
GAGCTCAAGGATGCAATTGCAGAGGGTTCAACCCAAGCAATGAAGGACAC
TATGGCCGCCCTTAACCAAGAAGTTATGCAGCTTGGCCAGTCCCTTTACA
ACCAACCAGGAGCTGGGGCTGCACCTGGCGCTGGACCTACTCCTGGTGCT
GAGGCTGGAGCTTCAGACTCATCCAACAAAGGACAGGATGGGTGATGTCA
TCGATGCAGATTTCACTGACAGCAAGTGAAAATCTGCCTAGGTTTTGTCT
TCCTAATTTATTGGATGTGTATAAGAATTTGATTTTGGCGGGATGTGATA
TAACTTGGG
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