DR908351

Overview
NameDR908351
Unique NameDR908351
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length659
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908351 vs. ExPASy Swiss-Prot
Match: DNAK_DESRM (Chaperone protein dnaK OS=Desulfotomaculum reducens (strain MI-1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 4.803e-34
Identity = 74/152 (48.68%), Postives = 100/152 (65.79%), Query Frame = 3
Query:    3 GSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGAS-TLPNDEVQRMVQEAERFAKEDKEKRDAIDTKNQADSVVYQTEKQLKELGDKVPAXXXXXXXXXXXXXXDAIAEGSTQAMKDTMAALNQEVMQLGQSLYNQ 455
            G F+L GIPPAPRGVPQIEVKFDID NGI+SVSA D GTG  Q I+ITG +  L +DE+ RMV EAE+FA+EDK++++A++ KNQADS++YQ EK +K+LG+                   A+    T  +K+ +  L + + +L   LY Q
Sbjct:  426 GRFQLSGIPPAPRGVPQIEVKFDIDVNGIVSVSAKDMGTGTVQSISITGGTGGLSDDEINRMVNEAEKFAEEDKKRKEAVEVKNQADSLIYQAEKTIKDLGENADKAKVEAVQKAVEELRTAMNGNDTDLIKNKLEELTKPLHELTADLYQQ 577          
BLAST of DR908351 vs. ExPASy Swiss-Prot
Match: DNAK_CHLT3 (Chaperone protein dnaK OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=dnaK PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 4.803e-34
Identity = 71/149 (47.65%), Postives = 96/149 (64.43%), Query Frame = 3
Query:    3 GSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGASTLPNDEVQRMVQEAERFAKEDKEKRDAIDTKNQADSVVYQTEKQLKELGDKVPAXXXXXXXXXXXXXXDAIAEGSTQAMKDTMAALNQEVMQLGQSLY 449
            G F LDGIPPAPRGVPQIEV FDIDANGIL VSA DK TGK+Q + I  +  L   E+++M ++A   A EDK+K++ +DTKN AD++++ TEKQ+ E+GDK+PA              +A   G+T  +K  M AL +E  +    +Y
Sbjct:  448 GRFHLDGIPPAPRGVPQIEVAFDIDANGILHVSAKDKATGKEQSVRIEASGKLSETEIEKMKKDASSHADEDKKKKEEVDTKNTADALIFSTEKQINEIGDKLPAENLSKIQAALDRLKEAHKTGNTATIKPAMDALTKEWNEAASKMY 596          
BLAST of DR908351 vs. ExPASy Swiss-Prot
Match: DNAK_SPHWW (Chaperone protein dnaK OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=dnaK PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 6.272e-34
Identity = 74/151 (49.01%), Postives = 100/151 (66.23%), Query Frame = 3
Query:    3 GSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGASTLPNDEVQRMVQEAERFAKEDKEKRDAIDTKNQADSVVYQTEKQLKELGDKVPAXXXXXXXXXXXXXXDAIAEGSTQAMKDTMAALNQEVMQLGQSLYNQ 455
            G F L GIPPAPRGVPQIEV FDIDANGI++VSA DKGTGK+Q I I  +  L + ++  MV++AE+FA+EDK++R A + KN A+S+++ TE+QL+E GDKV                 A+  G   AM +   AL Q  M+LGQ++Y +
Sbjct:  450 GQFDLIGIPPAPRGVPQIEVTFDIDANGIVNVSAKDKGTGKEQQIKIQASGGLSDADIDGMVKDAEKFAEEDKKRRAAAEAKNNAESLIHTTERQLQEHGDKVDGGLKSEIEAAIADAKTAVEGGDADAMTEKAQALAQVAMKLGQAIYEK 600          
BLAST of DR908351 vs. ExPASy Swiss-Prot
Match: DNAK_PORHA (Chaperone protein dnaK OS=Porphyra haitanensis GN=dnaK PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 6.272e-34
Identity = 71/103 (68.93%), Postives = 85/103 (82.52%), Query Frame = 3
Query:    3 GSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGASTLPNDEVQRMVQEAERFAKEDKEKRDAIDTKNQADSVVYQTEKQLKELGDKV 311
            G+FRLDGI PAPRGVPQIEV FDIDANGILSV A +K TGK+Q ITI+GASTLP D+V+RMV+EAE     D+++R  IDTKNQA+S+ YQ EKQ+KE  DK+
Sbjct:  449 GTFRLDGIMPAPRGVPQIEVTFDIDANGILSVKAKEKATGKEQSITISGASTLPKDDVERMVKEAEENFDTDQKRRKNIDTKNQAESLCYQAEKQIKEFEDKI 551          
BLAST of DR908351 vs. ExPASy Swiss-Prot
Match: DNAK_PELPB (Chaperone protein dnaK OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 6.272e-34
Identity = 70/149 (46.98%), Postives = 99/149 (66.44%), Query Frame = 3
Query:    3 GSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGASTLPNDEVQRMVQEAERFAKEDKEKRDAIDTKNQADSVVYQTEKQLKELGDKVPAXXXXXXXXXXXXXXDAIAEGSTQAMKDTMAALNQEVMQLGQSLY 449
            G F L  IPP+PRG+PQIEV FDID+NGIL VSA DK TGK+Q I I  +S L + E+ +M ++A+  A ED+++++ IDT+N ADS+++ TEKQLKELGDK+PA              +A   G+ +++K  M  LN+E  ++   LY
Sbjct:  448 GRFHLGDIPPSPRGIPQIEVTFDIDSNGILHVSAKDKATGKEQSIKIESSSKLTDAEISKMKEDAKEHAAEDQKRKEEIDTRNIADSLIFSTEKQLKELGDKIPADKRPVLEGSLEKLKEAYKNGTVESLKSAMEELNKEWSEIASHLY 596          
BLAST of DR908351 vs. ExPASy Swiss-Prot
Match: DNAK_PORYE (Chaperone protein dnaK OS=Porphyra yezoensis GN=dnaK PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 8.192e-34
Identity = 71/103 (68.93%), Postives = 85/103 (82.52%), Query Frame = 3
Query:    3 GSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGASTLPNDEVQRMVQEAERFAKEDKEKRDAIDTKNQADSVVYQTEKQLKELGDKV 311
            G+FRLDGI PAPRGVPQIEV FDIDANGILSV A +K TGK+Q ITI+GASTLP D+V+RMV+EAE     D+++R  IDTKNQA+S+ YQ EKQ+KE  DK+
Sbjct:  449 GTFRLDGIMPAPRGVPQIEVTFDIDANGILSVKAKEKATGKEQSITISGASTLPKDDVERMVKEAEENFDTDQKRRKNIDTKNQAESLCYQAEKQVKEFEDKI 551          
BLAST of DR908351 vs. ExPASy Swiss-Prot
Match: DNAK_PELPD (Chaperone protein dnaK OS=Pelobacter propionicus (strain DSM 2379) GN=dnaK PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 8.192e-34
Identity = 73/149 (48.99%), Postives = 96/149 (64.43%), Query Frame = 3
Query:    3 GSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGASTLPNDEVQRMVQEAERFAKEDKEKRDAIDTKNQADSVVYQTEKQLKELGDKVPAXXXXXXXXXXXXXXDAIAEGSTQAMKDTMAALNQEVMQLGQSLY 449
            G+F L GIPPAPRG+PQ+EV FDIDANGI+ VSA D GTGK+Q I IT +S L  +E+ +MV++AE  A EDK+KRDAI+ +N ADS+VY TEK LKE GDK+ A                +     +A+K     L Q   +L +++Y
Sbjct:  450 GNFELTGIPPAPRGIPQVEVTFDIDANGIVHVSAKDLGTGKEQSIRITASSGLSKEEIDKMVRDAESHADEDKKKRDAIEARNHADSMVYSTEKSLKEFGDKIDAVEKGNIENKIVELKKVMDGEDAEAIKKATDELAQAAHKLAEAMY 598          
BLAST of DR908351 vs. ExPASy Swiss-Prot
Match: DNAK_CAMC1 (Chaperone protein dnaK OS=Campylobacter concisus (strain 13826) GN=dnaK PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 8.192e-34
Identity = 72/153 (47.06%), Postives = 107/153 (69.93%), Query Frame = 3
Query:    3 GSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGASTLPNDEVQRMVQEAERFAKEDKEKRDAIDTKNQADSVVYQTEKQLKELGDKVPAXXXXXXXXXXXXXXDAIAE--GSTQAMKDTMAALNQEVMQLGQSLYNQ 455
            G+F L+GIP APRGVPQIEV+FDIDANGIL+VSA DK TGK Q+ITI+G+S L  DE+  MV++AE   +EDK+++DA++ +NQAD++V+QTEK + ELG+KVPA              + + +   S + +   + AL++   +L +++Y +
Sbjct:  449 GNFNLEGIPAAPRGVPQIEVEFDIDANGILTVSAKDKATGKAQNITISGSSGLSEDEINSMVKDAELHKEEDKKRKDAVEARNQADALVHQTEKSMSELGEKVPAEDRSNIEAALNDLKEVLKDENSSKEQIDAKVEALSKASHKLAEAMYKK 601          
BLAST of DR908351 vs. ExPASy Swiss-Prot
Match: DNAK_NITSB (Chaperone protein dnaK OS=Nitratiruptor sp. (strain SB155-2) GN=dnaK PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.070e-33
Identity = 70/153 (45.75%), Postives = 105/153 (68.63%), Query Frame = 3
Query:    3 GSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGASTLPNDEVQRMVQEAERFAKEDKEKRDAIDTKNQADSVVYQTEKQLKELGDKVPAXXXXXXXXXXXXXXDAIAE--GSTQAMKDTMAALNQEVMQLGQSLYNQ 455
            G F L+GIPPAPRGVPQIEV FDIDANGIL+VSA DK TGK+Q IT+TG S L  +E+QRM+Q+AE   +ED+++++ ++T+NQAD++ YQTEK LKE+G+ + A              + + +   + + ++  + AL Q   +L +++Y +
Sbjct:  449 GQFTLEGIPPAPRGVPQIEVTFDIDANGILTVSAKDKATGKEQKITVTGTSGLSEEEIQRMIQDAEAHKEEDRKRKELVETRNQADALAYQTEKSLKEVGNAISADERAQIEAALNDLKNVLKDENATKEQIEAKVQALTQVSHKLAEAMYKK 601          
BLAST of DR908351 vs. ExPASy Swiss-Prot
Match: DNAK_METI4 (Chaperone protein dnaK OS=Methylacidiphilum infernorum (isolate V4) GN=dnaK PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.070e-33
Identity = 72/149 (48.32%), Postives = 96/149 (64.43%), Query Frame = 3
Query:    3 GSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGASTLPNDEVQRMVQEAERFAKEDKEKRDAIDTKNQADSVVYQTEKQLKELGDKVPAXXXXXXXXXXXXXXDAIAEGSTQAMKDTMAALNQEVMQLGQSLY 449
            G F LDGIPPAPRGVPQIEV FDIDANGIL VSA D GTG++Q ITITG+S L  +E++RM +EAE + ++D + ++  + KN AD+  YQ EK L+E GDKV +              + I    T+A+K  M  LN++V  +   +Y
Sbjct:  452 GVFHLDGIPPAPRGVPQIEVTFDIDANGILHVSAKDLGTGREQKITITGSSGLSKEEIERMTKEAEAYREQDLKNKERAEAKNNADNAAYQAEKLLREYGDKVDSAKKMEVEKCIEKVREVIKGDDTEAIKRAMDELNEKVQAISVEMY 600          
The following BLAST results are available for this feature:
BLAST of DR908351 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_DESRM4.803e-3448.68Chaperone protein dnaK OS=Desulfotomaculum reducen... [more]
DNAK_CHLT34.803e-3447.65Chaperone protein dnaK OS=Chloroherpeton thalassiu... [more]
DNAK_SPHWW6.272e-3449.01Chaperone protein dnaK OS=Sphingomonas wittichii (... [more]
DNAK_PORHA6.272e-3468.93Chaperone protein dnaK OS=Porphyra haitanensis GN=... [more]
DNAK_PELPB6.272e-3446.98Chaperone protein dnaK OS=Pelodictyon phaeoclathra... [more]
DNAK_PORYE8.192e-3468.93Chaperone protein dnaK OS=Porphyra yezoensis GN=dn... [more]
DNAK_PELPD8.192e-3448.99Chaperone protein dnaK OS=Pelobacter propionicus (... [more]
DNAK_CAMC18.192e-3447.06Chaperone protein dnaK OS=Campylobacter concisus (... [more]
DNAK_NITSB1.070e-3345.75Chaperone protein dnaK OS=Nitratiruptor sp. (strai... [more]
DNAK_METI41.070e-3348.32Chaperone protein dnaK OS=Methylacidiphilum infern... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16479 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-30_A09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908351 ID=DR908351; Name=DR908351; organism=Citrus sinensis; type=EST; length=659bp
TTGGCAGCTTCCGTCTTGATGGCATCCCTCCAGCACCGCGTGGGGTTCCT
CAAATTGAGGTTAAATTTGACATCGATGCCAATGGTATTCTTTCTGTCTC
TGCTGTTGACAAAGGCACCGGAAAGAAACAAGACATCACCATTACTGGTG
CTAGCACTTTACCCAATGATGAGGTGCAAAGAATGGTGCAAGAAGCTGAG
AGATTTGCCAAGGAGGATAAAGAGAAAAGAGATGCTATTGACACCAAGAA
CCAGGCGGATTCTGTCGTATACCAAACGGAGAAACAGCTGAAGGAGCTGG
GAGACAAGGTTCCAGCCGAAGTGAAGGGGAAGGTCGAAGGAAAACTCAAG
GAGCTCAAGGATGCAATTGCAGAGGGTTCAACCCAAGCAATGAAGGACAC
TATGGCCGCCCTTAACCAAGAAGTTATGCAGCTTGGCCAGTCCCTTTACA
ACCAACCAGGAGCTGGGGCTGCACCTGGCGCTGGACCTACTCCTGGTGCT
GAGGCTGGAGCTTCAGACTCATCCAACAAAGGACAGGATGGGTGATGTCA
TCGATGCAGATTTCACTGACAGCAAGTGAAAATCTGCCTAGGTTTTGTCT
TCCTAATTTATTGGATGTGTATAAGAATTTGATTTTGGCGGGATGTGATA
TAACTTGGG
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