DR908351

Overview
NameDR908351
Unique NameDR908351
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length659
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908351 vs. ExPASy Swiss-Prot
Match: DNAK_CLOPS (Chaperone protein dnaK OS=Clostridium perfringens (strain SM101 / Type A) GN=dnaK PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.070e-33
Identity = 73/151 (48.34%), Postives = 97/151 (64.24%), Query Frame = 3
Query:    3 GSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGASTLPNDEVQRMVQEAERFAKEDKEKRDAIDTKNQADSVVYQTEKQLKELGDKVPAXXXXXXXXXXXXXXDAIAEGSTQAMKDTMAALNQEVMQLGQSLYNQ 455
            G F L GI PAPRG+PQIEV FDIDANGI+ VSA DK TGK+ +ITIT ++ L + E+ + V+EAE+FA+EDK++++AI+ KN A+ +VYQTEK L ELGDKV A                      +A+K  M  L Q   ++ + LY Q
Sbjct:  427 GRFTLSGIAPAPRGIPQIEVAFDIDANGIVKVSATDKATGKEANITITASTNLSDAEIDKAVKEAEQFAEEDKKRKEAIEVKNNAEQIVYQTEKTLNELGDKVSAEEKSEIEAKIEEVKKVKDGDDIEAIKKAMEDLTQAFYKISEKLYQQ 577          
BLAST of DR908351 vs. ExPASy Swiss-Prot
Match: DNAK_ACIC1 (Chaperone protein dnaK OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=dnaK PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.070e-33
Identity = 71/149 (47.65%), Postives = 97/149 (65.10%), Query Frame = 3
Query:    3 GSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGASTLPNDEVQRMVQEAERFAKEDKEKRDAIDTKNQADSVVYQTEKQLKELGDKVPAXXXXXXXXXXXXXXDAIAEGSTQAMKDTMAALNQEVMQLGQSLY 449
            G F L G+PPAPRGVPQIEV FDIDANGI+ VSA D  TGK+Q +TITG S LP +E++RM+++AE  A+ED+ +R+  + +NQAD+++YQTEK L+E  DKVPA               A+      A++     L  E  +LG ++Y
Sbjct:  428 GMFELTGLPPAPRGVPQIEVTFDIDANGIVHVSAKDLATGKEQSMTITGGSALPKEEIERMMRDAEAHAEEDRRRREEAEARNQADTLIYQTEKFLRENADKVPAAEKANVETAIANLKKAMEGSDVTAIRSATEQLATESQKLGAAMY 576          
BLAST of DR908351 vs. ExPASy Swiss-Prot
Match: DNAK_ZYMMO (Chaperone protein dnaK OS=Zymomonas mobilis GN=dnaK PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.397e-33
Identity = 74/151 (49.01%), Postives = 96/151 (63.58%), Query Frame = 3
Query:    3 GSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGASTLPNDEVQRMVQEAERFAKEDKEKRDAIDTKNQADSVVYQTEKQLKELGDKVPAXXXXXXXXXXXXXXDAIAEGSTQAMKDTMAALNQEVMQLGQSLYNQ 455
            G F L GIPPAPRGVPQIEV FDIDANGI++VSA DKGTGK+Q I I  +  L   ++ +MV++AE+FA +DK +R+  + KN  DS+V+ TE+QL ELGDKV A               A+       + +   AL Q  M+LGQ+LY Q
Sbjct:  450 GQFDLVGIPPAPRGVPQIEVTFDIDANGIVNVSAKDKGTGKEQQIRIQASGGLSEGDIDKMVKDAEKFAADDKHRRELAEAKNNGDSLVHTTERQLTELGDKVDAALKTEVEAAVAAVKTALEGEDVAQINEKTQALGQVAMKLGQALYEQ 600          
BLAST of DR908351 vs. ExPASy Swiss-Prot
Match: DNAK_CLOCE (Chaperone protein dnaK OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=dnaK PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.397e-33
Identity = 71/151 (47.02%), Postives = 96/151 (63.58%), Query Frame = 3
Query:    3 GSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGASTLPNDEVQRMVQEAERFAKEDKEKRDAIDTKNQADSVVYQTEKQLKELGDKVPAXXXXXXXXXXXXXXDAIAEGSTQAMKDTMAALNQEVMQLGQSLYNQ 455
            G F+L GIP APRGVPQIEV FDIDANGI+ VSA D GTG +Q ITIT ++ L + ++ + V+EAE+FA EDK++++ ID +N ADS++YQ+EK LK+LGDKV A              DA+     + +K     L Q    +   +Y Q
Sbjct:  426 GRFQLTGIPSAPRGVPQIEVTFDIDANGIVHVSAKDLGTGNEQKITITASTNLSDSDIDKAVKEAEKFAAEDKQRKEEIDVRNNADSLIYQSEKSLKDLGDKVSADDKSKIESGVNKVKDALKGTDIEVIKKATEELQQSFYDISSKIYQQ 576          
BLAST of DR908351 vs. ExPASy Swiss-Prot
Match: DNAK_THEP3 (Chaperone protein dnaK OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=dnaK PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.825e-33
Identity = 69/151 (45.70%), Postives = 99/151 (65.56%), Query Frame = 3
Query:    3 GSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGASTLPNDEVQRMVQEAERFAKEDKEKRDAIDTKNQADSVVYQTEKQLKELGDKVPAXXXXXXXXXXXXXXDAIAEGSTQAMKDTMAALNQEVMQLGQSLYNQ 455
            G F L GIPPAPRGVPQIEV FDIDANGI+ VSA D GTGK QDITIT  + L  +E+QRM+ EA+++ ++D++K++ I+ +N+ADS++YQ EK +K+LGDK+                 A+     +A+K+    L+Q   ++   +Y Q
Sbjct:  426 GRFILSGIPPAPRGVPQIEVTFDIDANGIVHVSAKDLGTGKSQDITITSTTNLSEEEIQRMINEAKQYEEQDRKKKEEIEIRNKADSLIYQAEKTMKDLGDKMTQAEKDEINREIENVRKALEGSDIEAIKNASEKLSQAFYKVSTRIYQQ 576          
BLAST of DR908351 vs. ExPASy Swiss-Prot
Match: DNAK_THEFY (Chaperone protein dnaK OS=Thermobifida fusca (strain YX) GN=dnaK PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.825e-33
Identity = 67/151 (44.37%), Postives = 101/151 (66.89%), Query Frame = 3
Query:    3 GSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGASTLPNDEVQRMVQEAERFAKEDKEKRDAIDTKNQADSVVYQTEKQLKELGDKVPAXXXXXXXXXXXXXXDAIAEGSTQAMKDTMAALNQEVMQLGQSLYNQ 455
            G F L GIPPAPRGVPQIEV FDIDANGI++V+A D GTGK+Q +TITG S LP ++++RM++EAE +A++D+++R+  +T+N A+S+VYQTEK + E  DK+P                A+     +A++     +     ++G ++Y+Q
Sbjct:  427 GVFDLTGIPPAPRGVPQIEVTFDIDANGIVNVTAKDLGTGKEQSVTITGGSALPKEDIERMIREAEEYAEQDRKRREEAETRNNAESLVYQTEKVISENEDKIPEDVKNETKEALDGLKKALEGSDIEAIRSASEKVALASQKIGSAIYSQ 577          
BLAST of DR908351 vs. ExPASy Swiss-Prot
Match: DNAK_METTH (Chaperone protein dnaK OS=Methanobacterium thermoautotrophicum GN=dnaK PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.825e-33
Identity = 73/147 (49.66%), Postives = 98/147 (66.67%), Query Frame = 3
Query:    3 GSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGASTLPNDEVQRMVQEAERFAKEDKEKRDAIDTKNQADSVVYQTEKQLKELGDKVPAXXXXXXXXXXXXXXDAIAEGSTQAMKDTMAALNQEVMQLGQS 443
            G F+L GIPPAPRGVPQIEV FDIDANGIL+VSA D GTGK+Q ITIT  + L  +E+++ ++EA++ A+ED+ K++ I+ +N ADS++Y  EK L ELGDKVPA              + IA    QA+K     L + V ++G S
Sbjct:  434 GRFQLVGIPPAPRGVPQIEVTFDIDANGILNVSAKDLGTGKEQAITITAPNKLSEEEIKQKIEEAKKHAEEDRRKQEEIEIRNNADSMIYTAEKTLDELGDKVPAEKKEEVEKQVRELRELIAGDDIQAIKSKTEELTKTVQEIGVS 580          
BLAST of DR908351 vs. ExPASy Swiss-Prot
Match: DNAK_THEPX (Chaperone protein dnaK OS=Thermoanaerobacter sp. (strain X514) GN=dnaK PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.383e-33
Identity = 69/151 (45.70%), Postives = 98/151 (64.90%), Query Frame = 3
Query:    3 GSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGASTLPNDEVQRMVQEAERFAKEDKEKRDAIDTKNQADSVVYQTEKQLKELGDKVPAXXXXXXXXXXXXXXDAIAEGSTQAMKDTMAALNQEVMQLGQSLYNQ 455
            G F L GIPPAPRGVPQIEV FDIDANGI+ VSA D GTGK QDITIT  + L  +E+QRM+ EA+++ ++D++K++ I+ +N+ADS++YQ EK +K+LGDK+                 A+     +A+K     L+Q   ++   +Y Q
Sbjct:  426 GRFILSGIPPAPRGVPQIEVTFDIDANGIVHVSAKDLGTGKSQDITITSTTNLSEEEIQRMINEAKQYEEQDRKKKEEIEIRNKADSLIYQAEKTMKDLGDKMTQAEKDEINKEIENVRKALEGSDIEAIKSASEKLSQAFYKVSTRIYQQ 576          
BLAST of DR908351 vs. ExPASy Swiss-Prot
Match: DNAK_PARD8 (Chaperone protein dnaK OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=dnaK PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.383e-33
Identity = 77/150 (51.33%), Postives = 95/150 (63.33%), Query Frame = 3
Query:    3 GSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGASTLPNDEVQRMVQEAERFAKEDKEKRDAIDTKNQADSVVYQTEKQLKELGDKVPAXXXXXXXXXXXXXXDAIAEGSTQAMKDTMAALNQEVMQLGQSLYN 452
            G F LDGIP A RGVPQIEV FDIDANGIL+VSA DKGTGK Q I I  +S L +DEV+RM +EA   A+ DK++++ ID  NQADS+++QTEKQLK+LGDK+PA              +A        +   MA LN       Q +YN
Sbjct:  449 GRFHLDGIPAAQRGVPQIEVTFDIDANGILNVSAKDKGTGKVQSIRIEASSGLSDDEVKRMKEEAAANAEADKKEKERIDKLNQADSMIFQTEKQLKDLGDKLPADKKAPIEGALNKLKEAHKAQDIAGIDAAMAELNSVFQAASQEMYN 598          
BLAST of DR908351 vs. ExPASy Swiss-Prot
Match: DNAK1_STRAW (Chaperone protein dnaK1 OS=Streptomyces avermitilis GN=dnaK1 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.383e-33
Identity = 79/157 (50.32%), Postives = 103/157 (65.61%), Query Frame = 3
Query:    3 GSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGASTLPNDEVQRMVQEAERFAKEDKEKRDAIDTKNQADSVVYQTEKQLKELGDKVPAXXXXXXXXXXXXXXDAI----AEGSTQA----MKDTMAALNQEVMQLGQSLY 449
            G F L G+PPAPRGVPQIEV FDIDANGI+ V+A D GTGK+Q +T+TG S+LP DEV RM QEAE++A ED  +R+A +T+NQ + +VYQTEK LK+  DKVP                A+    AEG   A      + +AA++Q   +LGQ++Y
Sbjct:  426 GMFELTGLPPAPRGVPQIEVAFDIDANGIMHVTAKDLGTGKEQKMTVTGGSSLPKDEVDRMRQEAEQYADEDHRRREAAETRNQGEQLVYQTEKFLKDNEDKVPGEVKTEVEASIEELKAALKGESAEGDNTAEIRTATEKVAAVSQ---KLGQAMY 579          
The following BLAST results are available for this feature:
BLAST of DR908351 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_CLOPS1.070e-3348.34Chaperone protein dnaK OS=Clostridium perfringens ... [more]
DNAK_ACIC11.070e-3347.65Chaperone protein dnaK OS=Acidothermus cellulolyti... [more]
DNAK_ZYMMO1.397e-3349.01Chaperone protein dnaK OS=Zymomonas mobilis GN=dna... [more]
DNAK_CLOCE1.397e-3347.02Chaperone protein dnaK OS=Clostridium cellulolytic... [more]
DNAK_THEP31.825e-3345.70Chaperone protein dnaK OS=Thermoanaerobacter pseud... [more]
DNAK_THEFY1.825e-3344.37Chaperone protein dnaK OS=Thermobifida fusca (stra... [more]
DNAK_METTH1.825e-3349.66Chaperone protein dnaK OS=Methanobacterium thermoa... [more]
DNAK_THEPX2.383e-3345.70Chaperone protein dnaK OS=Thermoanaerobacter sp. (... [more]
DNAK_PARD82.383e-3351.33Chaperone protein dnaK OS=Parabacteroides distason... [more]
DNAK1_STRAW2.383e-3350.32Chaperone protein dnaK1 OS=Streptomyces avermitili... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16479 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-30_A09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908351 ID=DR908351; Name=DR908351; organism=Citrus sinensis; type=EST; length=659bp
TTGGCAGCTTCCGTCTTGATGGCATCCCTCCAGCACCGCGTGGGGTTCCT
CAAATTGAGGTTAAATTTGACATCGATGCCAATGGTATTCTTTCTGTCTC
TGCTGTTGACAAAGGCACCGGAAAGAAACAAGACATCACCATTACTGGTG
CTAGCACTTTACCCAATGATGAGGTGCAAAGAATGGTGCAAGAAGCTGAG
AGATTTGCCAAGGAGGATAAAGAGAAAAGAGATGCTATTGACACCAAGAA
CCAGGCGGATTCTGTCGTATACCAAACGGAGAAACAGCTGAAGGAGCTGG
GAGACAAGGTTCCAGCCGAAGTGAAGGGGAAGGTCGAAGGAAAACTCAAG
GAGCTCAAGGATGCAATTGCAGAGGGTTCAACCCAAGCAATGAAGGACAC
TATGGCCGCCCTTAACCAAGAAGTTATGCAGCTTGGCCAGTCCCTTTACA
ACCAACCAGGAGCTGGGGCTGCACCTGGCGCTGGACCTACTCCTGGTGCT
GAGGCTGGAGCTTCAGACTCATCCAACAAAGGACAGGATGGGTGATGTCA
TCGATGCAGATTTCACTGACAGCAAGTGAAAATCTGCCTAGGTTTTGTCT
TCCTAATTTATTGGATGTGTATAAGAATTTGATTTTGGCGGGATGTGATA
TAACTTGGG
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