DR908351

Overview
NameDR908351
Unique NameDR908351
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length659
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908351 vs. ExPASy Swiss-Prot
Match: DNAK_YERPA (Chaperone protein dnaK OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=dnaK PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.552e-27
Identity = 59/105 (56.19%), Postives = 80/105 (76.19%), Query Frame = 3
Query:    3 GSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGASTLPNDEVQRMVQEAERFAKEDKEKRDAIDTKNQADSVVYQTEKQLKELGDKVPA 317
            G F LDGI PAPRG+ QIEV FDIDA+GIL VSA DK TG++Q ITI  +S L  +E+Q+MV++AE  A+ D++  + + T+NQAD +++ T KQL+E GDK+PA
Sbjct:  455 GQFNLDGIQPAPRGMAQIEVTFDIDADGILHVSAKDKNTGREQKITIKASSGLNEEEIQKMVRDAEANAEADRKFEELVQTRNQADHLIHGTRKQLEEAGDKLPA 559          
BLAST of DR908351 vs. ExPASy Swiss-Prot
Match: DNAK_YERE8 (Chaperone protein dnaK OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=dnaK PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.552e-27
Identity = 59/105 (56.19%), Postives = 80/105 (76.19%), Query Frame = 3
Query:    3 GSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGASTLPNDEVQRMVQEAERFAKEDKEKRDAIDTKNQADSVVYQTEKQLKELGDKVPA 317
            G F LDGI PAPRG+ QIEV FDIDA+GIL VSA DK TG++Q ITI  +S L  +E+Q+MV++AE  A+ D++  + + T+NQAD +++ T KQL+E GDK+PA
Sbjct:  455 GQFNLDGIQPAPRGMAQIEVTFDIDADGILHVSAKDKNTGREQKITIKASSGLNEEEIQKMVRDAEANAEADRKFEELVQTRNQADHLIHGTRKQLEEAGDKLPA 559          
BLAST of DR908351 vs. ExPASy Swiss-Prot
Match: DNAK_PSEAE (Chaperone protein dnaK OS=Pseudomonas aeruginosa GN=dnaK PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.552e-27
Identity = 67/149 (44.97%), Postives = 87/149 (58.39%), Query Frame = 3
Query:    3 GSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGASTLPNDEVQRMVQEAERFAKEDKEKRDAIDTKNQADSVVYQTEKQLKELGDKVPAXXXXXXXXXXXXXXDAIAEGSTQAMKDTMAALNQEVMQLGQSLY 449
            G F L  IPPAPRGVPQIEV FDIDANGIL VSA DK TGK+Q I I  +S L  DE+Q+MV++AE  A+ED++  +    +NQ D++V+ T K + E GDK  A               A+       ++  M AL+Q    L Q +Y
Sbjct:  455 GKFDLADIPPAPRGVPQIEVTFDIDANGILHVSAKDKATGKQQSIVIKASSGLSEDEIQQMVRDAEANAEEDRKFEELAAARNQGDALVHATRKMITEAGDKATAEDKATIEKALGELEAAVKGDDKAEIEAKMNALSQASTPLAQKMY 603          
BLAST of DR908351 vs. ExPASy Swiss-Prot
Match: DNAK_PSEAB (Chaperone protein dnaK OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=dnaK PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.552e-27
Identity = 67/149 (44.97%), Postives = 87/149 (58.39%), Query Frame = 3
Query:    3 GSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGASTLPNDEVQRMVQEAERFAKEDKEKRDAIDTKNQADSVVYQTEKQLKELGDKVPAXXXXXXXXXXXXXXDAIAEGSTQAMKDTMAALNQEVMQLGQSLY 449
            G F L  IPPAPRGVPQIEV FDIDANGIL VSA DK TGK+Q I I  +S L  DE+Q+MV++AE  A+ED++  +    +NQ D++V+ T K + E GDK  A               A+       ++  M AL+Q    L Q +Y
Sbjct:  455 GKFDLADIPPAPRGVPQIEVTFDIDANGILHVSAKDKATGKQQSIVIKASSGLSEDEIQQMVRDAEANAEEDRKFEELAAARNQGDALVHATRKMITEAGDKATAEDKATIEKALGELEAAVKGDDKAEIEAKMNALSQASTPLAQKMY 603          
BLAST of DR908351 vs. ExPASy Swiss-Prot
Match: DNAK_PEDPA (Chaperone protein dnaK OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=dnaK PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.552e-27
Identity = 63/151 (41.72%), Postives = 92/151 (60.93%), Query Frame = 3
Query:    3 GSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGASTLPNDEVQRMVQEAERFAKEDKEKRDAIDTKNQADSVVYQTEKQLKELGDKVPAXXXXXXXXXXXXXXDAIAEGSTQAMKDTMAALNQEVMQLGQSLYNQ 455
            G F+L  IP APRG+PQIEVKFDID NGI++VSA DKGTGK+Q ITI  +S L ++E+ RM++EA+   + DK++++ +D +N+ D +++ T+K LK+L  KV                 A  + +   MK     L++ V  L   LY Q
Sbjct:  428 GRFQLTDIPAAPRGIPQIEVKFDIDKNGIVNVSATDKGTGKEQKITIKSSSGLSDEEIDRMMKEAKENEEADKKRKEEVDLRNEVDQLIFTTDKTLKDLEGKVSEDEIKKAKDAKEALEKAQKDNNLDEMKAKKDDLSKIVQDLSVKLYQQ 578          
BLAST of DR908351 vs. ExPASy Swiss-Prot
Match: DNAK_METTE (Chaperone protein dnaK OS=Methanosarcina thermophila GN=dnaK PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.552e-27
Identity = 61/151 (40.40%), Postives = 92/151 (60.93%), Query Frame = 3
Query:    3 GSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGASTLPNDEVQRMVQEAERFAKEDKEKRDAIDTKNQADSVVYQTEKQLKELGDKVPAXXXXXXXXXXXXXXDAIAEGSTQAMKDTMAALNQEVMQLGQSLYNQ 455
            G F LDGIPPAPRGVPQIEV FDIDANGIL VSA D GTG++Q I+I     L + E++RM+++AE  A+ED+++++ ++T+N A++++   EK LKE GD                   A+     + +K    AL + +  +  ++Y +
Sbjct:  429 GRFTLDGIPPAPRGVPQIEVTFDIDANGILHVSAKDLGTGREQSISIQKPGGLTDAEIERMIKDAELHAEEDRKRKEEVETRNNAETLINAAEKTLKEAGDVATEDQKSKVNAAIDDLKKALEGKDAEEIKAKTEALQEAIYPISTAMYQK 579          
BLAST of DR908351 vs. ExPASy Swiss-Prot
Match: DNAK_MARAV (Chaperone protein dnaK OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=dnaK PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.552e-27
Identity = 64/149 (42.95%), Postives = 90/149 (60.40%), Query Frame = 3
Query:    3 GSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGASTLPNDEVQRMVQEAERFAKEDKEKRDAIDTKNQADSVVYQTEKQLKELGDKVPAXXXXXXXXXXXXXXDAIAEGSTQAMKDTMAALNQEVMQLGQSLY 449
            G F L  IPPAPRGVPQIEV FDIDANGIL+VSA DK TGK+Q I I  +S L +DE+++MV++AE  A+ED++  + +  +NQ D++V+   K L E GDKV                +A+     +A++     L +   +L Q +Y
Sbjct:  455 GRFDLADIPPAPRGVPQIEVTFDIDANGILNVSAKDKATGKEQSIVIKASSGLNDDEIEKMVRDAEANAEEDRKFEELVQARNQGDAMVHAVRKTLSEAGDKVSDSEKESIEAAIKDLEEALEGSDKEAIEAKTQKLTEVSSELAQKMY 603          
BLAST of DR908351 vs. ExPASy Swiss-Prot
Match: DNAK_HELPY (Chaperone protein dnaK OS=Helicobacter pylori GN=dnaK PE=2 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 2.552e-27
Identity = 66/153 (43.14%), Postives = 97/153 (63.40%), Query Frame = 3
Query:    3 GSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGASTLPNDEVQRMVQEAERFAKEDKEKRDAIDTKNQADSVVYQTEKQLKELGDKVPAXXXXXXXXXXXXXXDAIA-EGSTQA-MKDTMAALNQEVMQLGQSLYNQ 455
            G F L GI PAPRGVPQIEV FDIDANGIL+VSA DK TGK Q+I I+G+S L + E+++MV++AE   +ED +K++ I+ +N ADS+ +QT+K L E    +                D +  + +T+A ++D    L Q   +LG+++ N+
Sbjct:  449 GKFDLQGIAPAPRGVPQIEVTFDIDANGILTVSAQDKNTGKSQEIKISGSSGLSDSEIEKMVKDAELHKEEDAKKKEVIEARNHADSLAHQTQKSLDEHKTNLNENDANEIQNAINALKDCVKNDNATKAELEDKTKLLAQAAQKLGEAMANK 601          
BLAST of DR908351 vs. ExPASy Swiss-Prot
Match: DNAK_HELPG (Chaperone protein dnaK OS=Helicobacter pylori (strain G27) GN=dnaK PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.552e-27
Identity = 67/153 (43.79%), Postives = 96/153 (62.75%), Query Frame = 3
Query:    3 GSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGASTLPNDEVQRMVQEAERFAKEDKEKRDAIDTKNQADSVVYQTEKQLKELGDKVPAXXXXXXXXXXXXXXDAIA-EGSTQA-MKDTMAALNQEVMQLGQSLYNQ 455
            G F L GI PAPRGVPQIEV FDIDANGIL+VSA DK TGK Q+I I+G+S L + E+++MV++AE   +ED  K++ I+ +N ADS+ +QT+K L E    +                D I  + +T+A ++D    L Q   +LG+++ N+
Sbjct:  449 GKFDLQGIAPAPRGVPQIEVTFDIDANGILTVSAQDKNTGKSQEIKISGSSGLSDSEIEKMVKDAELHKEEDARKKEVIEARNHADSLAHQTQKSLDEHKTNLNENDANEIQNAINALKDCIKNDNATKAELEDKTKLLAQAAQKLGEAMANK 601          
BLAST of DR908351 vs. ExPASy Swiss-Prot
Match: DNAK_FRATT (Chaperone protein dnaK OS=Francisella tularensis subsp. tularensis GN=dnaK PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.552e-27
Identity = 64/149 (42.95%), Postives = 90/149 (60.40%), Query Frame = 3
Query:    3 GSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGASTLPNDEVQRMVQEAERFAKEDKEKRDAIDTKNQADSVVYQTEKQLKELGDKVPAXXXXXXXXXXXXXXDAIAEGSTQAMKDTMAALNQEVMQLGQSLY 449
            G F L  IPPAPRG+PQIEV FDIDANGIL+VSA DK TGK+Q+I I  +S L  +++++MVQ+AE  A+ DK+  D +  +N AD++++ + K ++ELGDKV A               A      QA++    AL +    + Q  Y
Sbjct:  457 GRFDLADIPPAPRGMPQIEVTFDIDANGILNVSAKDKATGKEQNIVIKSSSGLSEEDIEKMVQDAEANAEADKKFHDLVTARNTADNLIHSSRKAIQELGDKVTAAEKEKIEEACKELEAATKGDDKQAIESKTKALEEAFAPIAQKAY 605          
The following BLAST results are available for this feature:
BLAST of DR908351 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_YERPA2.552e-2756.19Chaperone protein dnaK OS=Yersinia pestis bv. Anti... [more]
DNAK_YERE82.552e-2756.19Chaperone protein dnaK OS=Yersinia enterocolitica ... [more]
DNAK_PSEAE2.552e-2744.97Chaperone protein dnaK OS=Pseudomonas aeruginosa G... [more]
DNAK_PSEAB2.552e-2744.97Chaperone protein dnaK OS=Pseudomonas aeruginosa (... [more]
DNAK_PEDPA2.552e-2741.72Chaperone protein dnaK OS=Pediococcus pentosaceus ... [more]
DNAK_METTE2.552e-2740.40Chaperone protein dnaK OS=Methanosarcina thermophi... [more]
DNAK_MARAV2.552e-2742.95Chaperone protein dnaK OS=Marinobacter aquaeolei (... [more]
DNAK_HELPY2.552e-2743.14Chaperone protein dnaK OS=Helicobacter pylori GN=d... [more]
DNAK_HELPG2.552e-2743.79Chaperone protein dnaK OS=Helicobacter pylori (str... [more]
DNAK_FRATT2.552e-2742.95Chaperone protein dnaK OS=Francisella tularensis s... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16479 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-30_A09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908351 ID=DR908351; Name=DR908351; organism=Citrus sinensis; type=EST; length=659bp
TTGGCAGCTTCCGTCTTGATGGCATCCCTCCAGCACCGCGTGGGGTTCCT
CAAATTGAGGTTAAATTTGACATCGATGCCAATGGTATTCTTTCTGTCTC
TGCTGTTGACAAAGGCACCGGAAAGAAACAAGACATCACCATTACTGGTG
CTAGCACTTTACCCAATGATGAGGTGCAAAGAATGGTGCAAGAAGCTGAG
AGATTTGCCAAGGAGGATAAAGAGAAAAGAGATGCTATTGACACCAAGAA
CCAGGCGGATTCTGTCGTATACCAAACGGAGAAACAGCTGAAGGAGCTGG
GAGACAAGGTTCCAGCCGAAGTGAAGGGGAAGGTCGAAGGAAAACTCAAG
GAGCTCAAGGATGCAATTGCAGAGGGTTCAACCCAAGCAATGAAGGACAC
TATGGCCGCCCTTAACCAAGAAGTTATGCAGCTTGGCCAGTCCCTTTACA
ACCAACCAGGAGCTGGGGCTGCACCTGGCGCTGGACCTACTCCTGGTGCT
GAGGCTGGAGCTTCAGACTCATCCAACAAAGGACAGGATGGGTGATGTCA
TCGATGCAGATTTCACTGACAGCAAGTGAAAATCTGCCTAGGTTTTGTCT
TCCTAATTTATTGGATGTGTATAAGAATTTGATTTTGGCGGGATGTGATA
TAACTTGGG
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