DR908351

Overview
NameDR908351
Unique NameDR908351
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length659
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908351 vs. ExPASy Swiss-Prot
Match: DNAK_CLOBM (Chaperone protein dnaK OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=dnaK PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.066e-33
Identity = 71/151 (47.02%), Postives = 96/151 (63.58%), Query Frame = 3
Query:    3 GSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGASTLPNDEVQRMVQEAERFAKEDKEKRDAIDTKNQADSVVYQTEKQLKELGDKVPAXXXXXXXXXXXXXXDAIAEGSTQAMKDTMAALNQEVMQLGQSLYNQ 455
            G F L GI PAPRG+PQIEV FDIDANGI++VSA DKGTGK+ +ITIT ++ L +DE+++ V EA++F  EDK+++++I+ KN AD +VYQTEK L +LGDKV A              D       +A+K     L Q    +   +Y Q
Sbjct:  427 GRFTLSGIAPAPRGIPQIEVTFDIDANGIVNVSAKDKGTGKEANITITASTNLTDDEIEKAVNEAKKFEAEDKKRKESIEVKNNADQIVYQTEKTLTDLGDKVSAEDKATIEEKVKAVKDVKEGEDLEAIKKATEDLTQTFYGISSKIYQQ 577          
BLAST of DR908351 vs. ExPASy Swiss-Prot
Match: DNAK_CLOBK (Chaperone protein dnaK OS=Clostridium botulinum (strain Okra / Type B1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.066e-33
Identity = 71/151 (47.02%), Postives = 96/151 (63.58%), Query Frame = 3
Query:    3 GSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGASTLPNDEVQRMVQEAERFAKEDKEKRDAIDTKNQADSVVYQTEKQLKELGDKVPAXXXXXXXXXXXXXXDAIAEGSTQAMKDTMAALNQEVMQLGQSLYNQ 455
            G F L GI PAPRG+PQIEV FDIDANGI++VSA DKGTGK+ +ITIT ++ L +DE+++ V EA++F  EDK+++++I+ KN AD +VYQTEK L +LGDKV A              D       +A+K     L Q    +   +Y Q
Sbjct:  427 GRFTLSGIAPAPRGIPQIEVTFDIDANGIVNVSAKDKGTGKEANITITASTNLTDDEIEKAVNEAKKFEAEDKKRKESIEVKNNADQIVYQTEKTLTDLGDKVSAEDKAQIEEKVKAVKDVKEGEDLEAIKKATEDLTQTFYGISSKIYQQ 577          
BLAST of DR908351 vs. ExPASy Swiss-Prot
Match: DNAK_CLOBB (Chaperone protein dnaK OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=dnaK PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.066e-33
Identity = 74/150 (49.33%), Postives = 100/150 (66.67%), Query Frame = 3
Query:    3 GSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGASTLPNDEVQRMVQEAERFAKEDKEKRDAIDTKNQADSVVYQTEKQLKELGDKVPAXXXXXXXXXXXXXXDAIAEG-STQAMKDTMAALNQEVMQLGQSLY 449
            G F L GI PAPRG+PQIEV FDIDANGI+ VSA+DKGTGK+ +ITIT ++ L +DE+ + V+EAE+FA+EDK++++ ++T N AD ++YQTEK L ELGDKV A               AI +G   +A+K     L QE   +   +Y
Sbjct:  427 GRFTLSGIAPAPRGIPQIEVTFDIDANGIVKVSALDKGTGKEANITITASTNLNDDEIDKAVKEAEKFAEEDKKRKEKVETLNNADQLIYQTEKALTELGDKVSA-EDKAKVTEKLEALKAIKDGEDLEAIKKATEELTQEFYAVSSKVY 575          
BLAST of DR908351 vs. ExPASy Swiss-Prot
Match: DNAK_JANSC (Chaperone protein dnaK OS=Jannaschia sp. (strain CCS1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 5.310e-33
Identity = 69/149 (46.31%), Postives = 100/149 (67.11%), Query Frame = 3
Query:    3 GSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGASTLPNDEVQRMVQEAERFAKEDKEKRDAIDTKNQADSVVYQTEKQLKELGDKVPAXXXXXXXXXXXXXXDAIAEGSTQAMKDTMAALNQEVMQLGQSLY 449
            G F L+GIPPAPRGVPQIEV FDIDANGI+SV A DKGTGK+Q ITI  +  L +D+++ MV+EAE  A+ DK+++D ++T+NQA+S+V+ TEK L+E G+KV                + +    T  +K  +  + +  M+LG+++Y
Sbjct:  450 GQFNLEGIPPAPRGVPQIEVTFDIDANGIVSVGAKDKGTGKEQQITIQASGGLSDDDIEAMVREAEENAEADKDRKDLVETRNQAESLVHGTEKSLEEHGEKVDPSTVEAIELALGALKETLETDDTAKIKGGIQNVTEAAMRLGEAIY 598          
BLAST of DR908351 vs. ExPASy Swiss-Prot
Match: DNAK_CLOB6 (Chaperone protein dnaK OS=Clostridium botulinum (strain 657 / Type Ba4) GN=dnaK PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 5.310e-33
Identity = 71/151 (47.02%), Postives = 96/151 (63.58%), Query Frame = 3
Query:    3 GSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGASTLPNDEVQRMVQEAERFAKEDKEKRDAIDTKNQADSVVYQTEKQLKELGDKVPAXXXXXXXXXXXXXXDAIAEGSTQAMKDTMAALNQEVMQLGQSLYNQ 455
            G F L GI PAPRG+PQIEV FDIDANGI++VSA DKGTGK+ +ITIT ++ L +DE+++ V EA++F  EDK+++++I+ KN AD +VYQTEK L +LGDKV A              D       +A+K     L Q    +   +Y Q
Sbjct:  427 GRFTLSGIAPAPRGIPQIEVTFDIDANGIVNVSAKDKGTGKEANITITASTNLTDDEIEKAVNEAKKFEAEDKKRKESIEVKNNADQIVYQTEKTLTDLGDKVSAEDKAQIEEKVKVVKDVKDGEDLEAIKKATEDLTQTFYGISSKIYQQ 577          
BLAST of DR908351 vs. ExPASy Swiss-Prot
Match: DNAK_AKKM8 (Chaperone protein dnaK OS=Akkermansia muciniphila (strain ATCC BAA-835) GN=dnaK PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 5.310e-33
Identity = 70/131 (53.44%), Postives = 94/131 (71.76%), Query Frame = 3
Query:    3 GSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGASTLPNDEVQRMVQEAERFAKEDKEKRDAIDTKNQADSVVYQTEKQLKELGDKVPAXXXXXXXXXXXXXXDAIAEGSTQAMK 395
            G+F+LDGI PAPRGVPQIEV FDIDANGIL VSA DKGTGK+Q I+I G+S L  DE++R  ++AE  A+EDK++ + IDT NQADS+ +  E+QLK++GDK+PA              +A+++    A+K
Sbjct:  452 GNFKLDGISPAPRGVPQIEVTFDIDANGILHVSAKDKGTGKEQKISIQGSSGLSKDEIERAKRDAEAHAEEDKKRAEEIDTINQADSLCFSVERQLKDMGDKLPADLKREIEDKVTRLKEAVSKKDVTAIK 582          
BLAST of DR908351 vs. ExPASy Swiss-Prot
Match: DNAK_STRGG (Chaperone protein dnaK OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=dnaK PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 6.935e-33
Identity = 70/149 (46.98%), Postives = 98/149 (65.77%), Query Frame = 3
Query:    3 GSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGASTLPNDEVQRMVQEAERFAKEDKEKRDAIDTKNQADSVVYQTEKQLKELGDKVPAXXXXXXXXXXXXXXDAIAEGSTQAMKDTMAALNQEVMQLGQSLY 449
            G F L G+PPAPRGVPQIEV FDIDANGI+ V+A D GTGK+Q +T+TG S+LP DEV RM +EAE++A+ED  +R+A +++NQ + +VYQTEK LK+  DKVPA              + +    +  ++     +     +LGQ++Y
Sbjct:  426 GMFELTGLPPAPRGVPQIEVAFDIDANGIMHVAAKDLGTGKEQKMTVTGGSSLPKDEVNRMREEAEKYAEEDHARREAAESRNQGEQLVYQTEKFLKDNEDKVPADVKTEVETAVGELKEKLKGEDSAEIRTATEKVAAVSQKLGQAMY 574          
BLAST of DR908351 vs. ExPASy Swiss-Prot
Match: DNAK_PORGI (Chaperone protein dnaK OS=Porphyromonas gingivalis GN=dnaK PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 6.935e-33
Identity = 75/149 (50.34%), Postives = 96/149 (64.43%), Query Frame = 3
Query:    3 GSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGASTLPNDEVQRMVQEAERFAKEDKEKRDAIDTKNQADSVVYQTEKQLKELGDKVPAXXXXXXXXXXXXXXDAIAEGSTQAMKDTMAALNQEVMQLGQSLY 449
            G F LDGI PAPR  PQIEV FDIDANGIL+V+A DK TGKKQ+I I  +S L +DE++RM +EA+  A+ DK++++ ID  NQADS+++QTEKQLKELGDK PA              +A       A+   MA L   +   G+ LY
Sbjct:  449 GRFNLDGIAPAPRQTPQIEVTFDIDANGILNVTAHDKATGKKQNIRIEASSGLSDDEIKRMKEEAQANAEADKKEKERIDKINQADSMIFQTEKQLKELGDKFPADKKAPIDTALDKLKEAHKAQDVAAIDTAMAELQTALSAAGEELY 597          
BLAST of DR908351 vs. ExPASy Swiss-Prot
Match: DNAK_PORG3 (Chaperone protein dnaK OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=dnaK PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 6.935e-33
Identity = 75/149 (50.34%), Postives = 96/149 (64.43%), Query Frame = 3
Query:    3 GSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGASTLPNDEVQRMVQEAERFAKEDKEKRDAIDTKNQADSVVYQTEKQLKELGDKVPAXXXXXXXXXXXXXXDAIAEGSTQAMKDTMAALNQEVMQLGQSLY 449
            G F LDGI PAPR  PQIEV FDIDANGIL+V+A DK TGKKQ+I I  +S L +DE++RM +EA+  A+ DK++++ ID  NQADS+++QTEKQLKELGDK PA              +A       A+   MA L   +   G+ LY
Sbjct:  449 GRFNLDGIAPAPRQTPQIEVTFDIDANGILNVTAHDKATGKKQNIRIEASSGLSDDEIKRMKEEAQANAEADKKEKERIDKINQADSMIFQTEKQLKELGDKFPADKKAPIDTALDKLKEAHKAQDVAAIDTAMAELQTALTAAGEELY 597          
BLAST of DR908351 vs. ExPASy Swiss-Prot
Match: DNAK_NOCFA (Chaperone protein dnaK OS=Nocardia farcinica GN=dnaK PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 6.935e-33
Identity = 73/149 (48.99%), Postives = 98/149 (65.77%), Query Frame = 3
Query:    3 GSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGASTLPNDEVQRMVQEAERFAKEDKEKRDAIDTKNQADSVVYQTEKQLKELGDKVPAXXXXXXXXXXXXXXDAIAEGSTQAMKDTMAALNQEVMQLGQSLY 449
            GSF L GIPPAPRGVPQIEV FDIDANGI+ V+A DKGTGK+  I I   S L  +E+ RM+++AE+ A EDK +R+  +T+NQA+++V+QTEK +K+  DKVPA              +A+A     A+K  +  L  E   LGQ++Y
Sbjct:  429 GSFELTGIPPAPRGVPQIEVTFDIDANGIVHVTAKDKGTGKENTIKIQDGSGLSKEEIDRMIKDAEQHAAEDKARREEAETRNQAETLVHQTEKFIKDNEDKVPADVKSKVEAAIAEANEALAGTDIAAVKAAVEKLATESQALGQAIY 577          
The following BLAST results are available for this feature:
BLAST of DR908351 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_CLOBM4.066e-3347.02Chaperone protein dnaK OS=Clostridium botulinum (s... [more]
DNAK_CLOBK4.066e-3347.02Chaperone protein dnaK OS=Clostridium botulinum (s... [more]
DNAK_CLOBB4.066e-3349.33Chaperone protein dnaK OS=Clostridium botulinum (s... [more]
DNAK_JANSC5.310e-3346.31Chaperone protein dnaK OS=Jannaschia sp. (strain C... [more]
DNAK_CLOB65.310e-3347.02Chaperone protein dnaK OS=Clostridium botulinum (s... [more]
DNAK_AKKM85.310e-3353.44Chaperone protein dnaK OS=Akkermansia muciniphila ... [more]
DNAK_STRGG6.935e-3346.98Chaperone protein dnaK OS=Streptomyces griseus sub... [more]
DNAK_PORGI6.935e-3350.34Chaperone protein dnaK OS=Porphyromonas gingivalis... [more]
DNAK_PORG36.935e-3350.34Chaperone protein dnaK OS=Porphyromonas gingivalis... [more]
DNAK_NOCFA6.935e-3348.99Chaperone protein dnaK OS=Nocardia farcinica GN=dn... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16479 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-30_A09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908351 ID=DR908351; Name=DR908351; organism=Citrus sinensis; type=EST; length=659bp
TTGGCAGCTTCCGTCTTGATGGCATCCCTCCAGCACCGCGTGGGGTTCCT
CAAATTGAGGTTAAATTTGACATCGATGCCAATGGTATTCTTTCTGTCTC
TGCTGTTGACAAAGGCACCGGAAAGAAACAAGACATCACCATTACTGGTG
CTAGCACTTTACCCAATGATGAGGTGCAAAGAATGGTGCAAGAAGCTGAG
AGATTTGCCAAGGAGGATAAAGAGAAAAGAGATGCTATTGACACCAAGAA
CCAGGCGGATTCTGTCGTATACCAAACGGAGAAACAGCTGAAGGAGCTGG
GAGACAAGGTTCCAGCCGAAGTGAAGGGGAAGGTCGAAGGAAAACTCAAG
GAGCTCAAGGATGCAATTGCAGAGGGTTCAACCCAAGCAATGAAGGACAC
TATGGCCGCCCTTAACCAAGAAGTTATGCAGCTTGGCCAGTCCCTTTACA
ACCAACCAGGAGCTGGGGCTGCACCTGGCGCTGGACCTACTCCTGGTGCT
GAGGCTGGAGCTTCAGACTCATCCAACAAAGGACAGGATGGGTGATGTCA
TCGATGCAGATTTCACTGACAGCAAGTGAAAATCTGCCTAGGTTTTGTCT
TCCTAATTTATTGGATGTGTATAAGAATTTGATTTTGGCGGGATGTGATA
TAACTTGGG
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