EY680401
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY680401 vs. ExPASy Swiss-Prot
Match: EFTU_BORBZ (Elongation factor Tu OS=Borrelia burgdorferi (strain ZS7) GN=tuf PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.477e-21 Identity = 63/197 (31.98%), Postives = 103/197 (52.28%), Query Frame = 1 Query: 55 IMGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGF 645 + + K H+N+ IGHVD GK+T T + ++K + ++ KY + D E+ RGITI+ ++ET + +D PGH D+IKNMITG +Q D A+L++ + +G + QT+EH LLA +G+K++I NK+D P+ + + EV ++K G++ D P + S F Sbjct: 5 VFQRTKPHMNVGTIGHVDHGKTTLTAAISIYCSKLNK-------------DAKALKYEDI-DNAPEEKARGITINARHIEYETANRHYAHVDCPGHADYIKNMITGAAQMDAAILLVAADSGA-------EPQTKEHLLLAQRMGIKKIIVFLNKLDLADPEL----VELVEVEVLELVEKYGFSAD-TPIIKGSAF 175
BLAST of EY680401 vs. ExPASy Swiss-Prot
Match: EFTU_BORBU (Elongation factor Tu OS=Borrelia burgdorferi GN=tuf PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.477e-21 Identity = 63/197 (31.98%), Postives = 103/197 (52.28%), Query Frame = 1 Query: 55 IMGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGF 645 + + K H+N+ IGHVD GK+T T + ++K + ++ KY + D E+ RGITI+ ++ET + +D PGH D+IKNMITG +Q D A+L++ + +G + QT+EH LLA +G+K++I NK+D P+ + + EV ++K G++ D P + S F Sbjct: 5 VFQRTKPHMNVGTIGHVDHGKTTLTAAISIYCSKLNK-------------DAKALKYEDI-DNAPEEKARGITINARHIEYETANRHYAHVDCPGHADYIKNMITGAAQMDAAILLVAADSGA-------EPQTKEHLLLAQRMGIKKIIVFLNKLDLADPEL----VELVEVEVLELVEKYGFSAD-TPIIKGSAF 175
BLAST of EY680401 vs. ExPASy Swiss-Prot
Match: EFTU_BDEBA (Elongation factor Tu OS=Bdellovibrio bacteriovorus GN=tuf PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.477e-21 Identity = 67/200 (33.50%), Postives = 94/200 (47.00%), Query Frame = 1 Query: 64 KEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFV---PISGFEGD 654 + K H+NI IGHVD GK+T T + L K +++ +DK E+ RGITI ++ET + +D PGH D++KNMITG +Q D A+L++ S G QTREH LLA +GV ++ NK+D K + + EV L K + D IP V + EGD Sbjct: 8 RNKPHVNIGTIGHVDHGKTTLTAAITTTLAASGKAQAMAYDQ---------------IDKSPEEKARGITISTTHVEYETDNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSSADGPMP-------QTREHILLARQVGVPALVVFMNKVDMVD---DKELLELVELEVRELLSKYEFPGDDIPVVKGSALKALEGD 182
BLAST of EY680401 vs. ExPASy Swiss-Prot
Match: EFTU_SYNS3 (Elongation factor Tu OS=Synechococcus sp. (strain CC9311) GN=tuf PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 7.153e-21 Identity = 70/199 (35.18%), Postives = 99/199 (49.75%), Query Frame = 1 Query: 64 KEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK----EVSSYLKKVGYNPDKIPFVPISGFE 648 + K H+NI IGHVD GK+T T + L +K AE+ YA + D ERERGITI+ A ++ET + +D PGH D++KNMITG +Q D A+L+ +T G QT+EH LLA +GV ++ NK D +EI++ E+ L + D IP V +SG + Sbjct: 8 RNKPHVNIGTIGHVDHGKTTLTAAITNVLA----------KKGQAEVQN----YADI-DGAPEERERGITINTAHVEYETDSRHYAHVDCPGHADYVKNMITGAAQMDGAILVCAATDGPM-------AQTKEHILLAKQVGVPALVVALNKCDMVDD-------EEIIELVELEIRELLSSYDFPGDDIPVVQVSGLK 177
BLAST of EY680401 vs. ExPASy Swiss-Prot
Match: EFTU_PROM4 (Elongation factor Tu OS=Prochlorococcus marinus (strain MIT 9211) GN=tuf PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 7.153e-21 Identity = 67/202 (33.17%), Postives = 101/202 (50.00%), Query Frame = 1 Query: 64 KEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPDKIPFVPIS---GFEGDN 657 + K H+NI IGHVD GK+T T I + ++ + +A + +D ERERGITI+ A ++ET + +D PGH D++KNMITG +Q D A++++ +T G QT+EH LLA +GV ++ NK D A E+V+ E+ L + D IP + +S EGD+ Sbjct: 8 RNKPHVNIGTIGHVDHGKTTLTA-------AITNVLAKKGQAQAQDYGD--------IDGAPEERERGITINTAHVEYETDGRHYAHVDCPGHADYVKNMITGAAQMDGAIIVVAATDGAM-------AQTKEHILLAKQVGVPSLVVALNKCDMV----DDAEMIELVEMEIRELLSSYDFPGDDIPVIQVSALKALEGDS 183
BLAST of EY680401 vs. ExPASy Swiss-Prot
Match: EFTU_MYCUA (Elongation factor Tu OS=Mycobacterium ulcerans (strain Agy99) GN=tuf PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 7.153e-21 Identity = 63/156 (40.38%), Postives = 91/156 (58.33%), Query Frame = 1 Query: 64 KEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK-RSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDA 528 + K H+NI IGHVD GK+T T I K + +++ E+N+ R+F +D ER+RGITI+I+ +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK DA Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLHDKYP----ELNESRAFDQ---IDNAPEERQRGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKSDA 142
BLAST of EY680401 vs. ExPASy Swiss-Prot
Match: EFTU_MYCTU (Elongation factor Tu OS=Mycobacterium tuberculosis GN=tuf PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 7.153e-21 Identity = 63/155 (40.65%), Postives = 89/155 (57.42%), Query Frame = 1 Query: 64 KEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDA 528 + K H+NI IGHVD GK+T T I K + ++F ++N+ K +D ER+RGITI+IA +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK DA Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLHDKFP----DLNET--KAFDQIDNAPEERQRGITINIAHVEYQTDKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKADA 142
BLAST of EY680401 vs. ExPASy Swiss-Prot
Match: EFTU_MYCTA (Elongation factor Tu OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=tuf PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 7.153e-21 Identity = 63/155 (40.65%), Postives = 89/155 (57.42%), Query Frame = 1 Query: 64 KEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDA 528 + K H+NI IGHVD GK+T T I K + ++F ++N+ K +D ER+RGITI+IA +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK DA Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLHDKFP----DLNET--KAFDQIDNAPEERQRGITINIAHVEYQTDKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKADA 142
BLAST of EY680401 vs. ExPASy Swiss-Prot
Match: EFTU_MYCS2 (Elongation factor Tu OS=Mycobacterium smegmatis GN=tuf PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 7.153e-21 Identity = 63/156 (40.38%), Postives = 91/156 (58.33%), Query Frame = 1 Query: 64 KEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK-RSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDA 528 + K H+NI IGHVD GK+T T I K + ++F ++N+ R+F +D ER+RGITI+I+ +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK DA Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLHDKFP----DLNESRAFDQ---IDNAPEERQRGITINISHVEYQTDKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKSDA 142
BLAST of EY680401 vs. ExPASy Swiss-Prot
Match: EFTU_MYCMM (Elongation factor Tu OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=tuf PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 7.153e-21 Identity = 63/156 (40.38%), Postives = 91/156 (58.33%), Query Frame = 1 Query: 64 KEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK-RSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDA 528 + K H+NI IGHVD GK+T T I K + +++ E+N+ R+F +D ER+RGITI+I+ +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK DA Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLHDKYP----ELNESRAFDQ---IDNAPEERQRGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKSDA 142 The following BLAST results are available for this feature:
BLAST of EY680401 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY680401 ID=EY680401; Name=EY680401; organism=Citrus sinensis; type=EST; length=838bpback to top |