DR908229
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908229 vs. ExPASy Swiss-Prot
Match: RAB8B_HUMAN (Ras-related protein Rab-8B OS=Homo sapiens GN=RAB8B PE=1 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 5.587e-22 Identity = 38/83 (45.78%), Postives = 57/83 (68.67%), Query Frame = 2 Query: 2 GKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNW 250 GKT L+ ++ F+ + +TIG DF + ++ + + LQIWDTAGQERF+++ A+YRGA +LVYD+ + KSFDN+ NW Sbjct: 20 GKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNW 102 HSP 2 Score: 38.1206 bits (87), Expect = 5.587e-22 Identity = 22/57 (38.60%), Postives = 35/57 (61.40%), Query Frame = 1 Query: 304 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 474 ++LGNK D++ + R VS+++ G I + ETSAK NVEEAF +A++ + Sbjct: 117 MILGNKCDMN--DKRQVSKERGEKLAIDYG-IKFLETSAKSSANVEEAFFTLARDIM 170
BLAST of DR908229 vs. ExPASy Swiss-Prot
Match: RB2BV_BETVU (Ras-related protein Rab2BV OS=Beta vulgaris GN=RAB2BV PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.263e-22 Identity = 35/86 (40.70%), Postives = 59/86 (68.60%), Query Frame = 2 Query: 2 GKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREE 259 GK+++++++ +F + K+TIG +F T+ +Q E + QIWDTAGQER++++ A+YRGA +LVYD+ ++FDN+ W E Sbjct: 24 GKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRE 109 HSP 2 Score: 40.4318 bits (93), Expect = 7.263e-22 Identity = 33/95 (34.74%), Postives = 51/95 (53.68%), Query Frame = 1 Query: 304 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQ--------CIAKNALKSGEEEEIYLP---DTIDVGNSSQPRSSGC 555 ++ GNK D+ + R VSE+ +A A K + + ETSA E +N+E+AFQ I+K AL + +E LP TI+V ++S + C Sbjct: 121 MMAGNKSDLK--HLRAVSEEDGQA-LAEKEGLSFLETSALEAVNIEKAFQTILTEIYHIISKKAL-AAQEASSNLPGQGTTINVADASANQRRSC 211
BLAST of DR908229 vs. ExPASy Swiss-Prot
Match: RAB8_DISOM (Ras-related protein Rab-8 OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 7.266e-22 Identity = 38/83 (45.78%), Postives = 56/83 (67.47%), Query Frame = 2 Query: 2 GKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNW 250 GKT L+ ++ F+ + +TIG DF + V+ + + LQIWDTAGQERF+++ A+YRGA + VYD+ + KSFDN+ NW Sbjct: 20 GKTCLLFRFSEDAFNTTFISTIGIDFKIRTVELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMKVYDITNEKSFDNIKNW 102 HSP 2 Score: 39.6614 bits (91), Expect = 7.266e-22 Identity = 23/57 (40.35%), Postives = 35/57 (61.40%), Query Frame = 1 Query: 304 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 474 ++LGNK D++ R VS+++ G I + ETSAK INVEEAF +A++ + Sbjct: 117 MILGNKCDMN--EKRQVSKERGEKLAIDYG-IKFLETSAKSSINVEEAFITLARDIM 170
BLAST of DR908229 vs. ExPASy Swiss-Prot
Match: RAB8A_PONAB (Ras-related protein Rab-8A OS=Pongo abelii GN=RAB8A PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 7.270e-22 Identity = 37/83 (44.58%), Postives = 58/83 (69.88%), Query Frame = 2 Query: 2 GKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNW 250 GKT ++ ++ F++ + +TIG DF + ++ + + LQIWDTAGQERF+++ A+YRGA +LVYD+ + KSFDN+ NW Sbjct: 20 GKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNW 102 HSP 2 Score: 38.5058 bits (88), Expect = 7.270e-22 Identity = 29/83 (34.94%), Postives = 47/83 (56.63%), Query Frame = 1 Query: 304 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDVGNSSQPRSSG 552 ++LGNK DV+ + R VS+++ G I + ETSAK INVE AF +A++ +K+ ++++ GNS Q + G Sbjct: 117 MILGNKRDVN--DKRQVSKERGEKLALDYG-IKFMETSAKANINVENAFFTLARD-IKAKMDKKL-------EGNSPQGSNQG 188
BLAST of DR908229 vs. ExPASy Swiss-Prot
Match: RAB8A_CHICK (Ras-related protein Rab-8A OS=Gallus gallus GN=RAB8A PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 7.270e-22 Identity = 39/93 (41.94%), Postives = 59/93 (63.44%), Query Frame = 2 Query: 2 GKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASP 280 GKT + ++ F+ + +TIG DF + ++ + + LQIWDTAGQERF+++ A+YRGA +LVYD+ + KSF+N+ NW ASP Sbjct: 20 GKTCALFRFSEDAFNATFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIRNWVRNIEEHASP 112 HSP 2 Score: 39.6614 bits (91), Expect = 7.270e-22 Identity = 29/83 (34.94%), Postives = 47/83 (56.63%), Query Frame = 1 Query: 304 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDVGNSSQPRSSG 552 ++LGNK D + + R VS ++ AS G I + ETSAK IN+E AF +A++ +K+ ++++ GNS Q + G Sbjct: 117 MILGNKCDAN--DKRQVSREQGEKLAASFG-IKFMETSAKANINIENAFFTLARD-IKAKMDKKL-------EGNSPQGSNQG 188
BLAST of DR908229 vs. ExPASy Swiss-Prot
Match: RAB5B_CHICK (Ras-related protein Rab-5B OS=Gallus gallus GN=RAB5B PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 9.445e-22 Identity = 41/94 (43.62%), Postives = 60/94 (63.83%), Query Frame = 2 Query: 2 GKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPS 283 GK+SL+ ++V +F ++TIGA FLT+ V +D +IWDTAGQER+ SL +YRGA ++VYD+ + ++F W +E QASPS Sbjct: 32 GKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPS 125 HSP 2 Score: 36.1946 bits (82), Expect = 9.445e-22 Identity = 22/56 (39.29%), Postives = 34/56 (60.71%), Query Frame = 1 Query: 313 GNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKS 480 GNK D+ + R+V ++A+A+ A ++ + ETSAK +NV + F IAK KS Sbjct: 132 GNKADL--ASKRMVEYEEAQAY-ADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKS 184
BLAST of DR908229 vs. ExPASy Swiss-Prot
Match: RAB5C_PONAB (Ras-related protein Rab-5C OS=Pongo abelii GN=RAB5C PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 9.445e-22 Identity = 41/94 (43.62%), Postives = 60/94 (63.83%), Query Frame = 2 Query: 2 GKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPS 283 GK+SL+ ++V +F ++TIGA FLT+ V +D +IWDTAGQER+ SL +YRGA ++VYD+ + +F NW +E QASP+ Sbjct: 33 GKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPN 126 HSP 2 Score: 36.5798 bits (83), Expect = 9.445e-22 Identity = 26/84 (30.95%), Postives = 42/84 (50.00%), Query Frame = 1 Query: 313 GNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDT---IDVGNSSQPRSSGC 555 GNK D+ + R V ++A+A+ A ++ + ETSAK +NV E F IAK K+ + P +D+ ++ S C Sbjct: 133 GNKADL--ASKRAVEFQEAQAY-ADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNATGAPGRNRGVDLQENNPASRSQC 213
BLAST of DR908229 vs. ExPASy Swiss-Prot
Match: RAB5C_HUMAN (Ras-related protein Rab-5C OS=Homo sapiens GN=RAB5C PE=1 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 9.445e-22 Identity = 41/94 (43.62%), Postives = 60/94 (63.83%), Query Frame = 2 Query: 2 GKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPS 283 GK+SL+ ++V +F ++TIGA FLT+ V +D +IWDTAGQER+ SL +YRGA ++VYD+ + +F NW +E QASP+ Sbjct: 33 GKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPN 126 HSP 2 Score: 36.5798 bits (83), Expect = 9.445e-22 Identity = 26/84 (30.95%), Postives = 42/84 (50.00%), Query Frame = 1 Query: 313 GNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDT---IDVGNSSQPRSSGC 555 GNK D+ + R V ++A+A+ A ++ + ETSAK +NV E F IAK K+ + P +D+ ++ S C Sbjct: 133 GNKADL--ASKRAVEFQEAQAY-ADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNATGAPGRNRGVDLQENNPASRSQC 213
BLAST of DR908229 vs. ExPASy Swiss-Prot
Match: RAB5C_BOVIN (Ras-related protein Rab-5C OS=Bos taurus GN=RAB5C PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 9.445e-22 Identity = 41/94 (43.62%), Postives = 60/94 (63.83%), Query Frame = 2 Query: 2 GKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPS 283 GK+SL+ ++V +F ++TIGA FLT+ V +D +IWDTAGQER+ SL +YRGA ++VYD+ + +F NW +E QASP+ Sbjct: 33 GKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPN 126 HSP 2 Score: 36.5798 bits (83), Expect = 9.445e-22 Identity = 26/84 (30.95%), Postives = 42/84 (50.00%), Query Frame = 1 Query: 313 GNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDT---IDVGNSSQPRSSGC 555 GNK D+ + R V ++A+A+ A ++ + ETSAK +NV E F IAK K+ + P +D+ ++ S C Sbjct: 133 GNKADL--ASKRAVEFQEAQAY-AEDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAAGAPGRNRGVDLQENNPASRSQC 213
BLAST of DR908229 vs. ExPASy Swiss-Prot
Match: ARA3_ARATH (Ras-related protein ARA-3 OS=Arabidopsis thaliana GN=ARA-3 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 9.445e-22 Identity = 36/83 (43.37%), Postives = 55/83 (66.27%), Query Frame = 2 Query: 2 GKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNW 250 GK+ L+ ++ + F+ + TIG DF + ++ + + LQIWDTAGQERF+++ A+YRGA +LVYDV SF+N+ NW Sbjct: 27 GKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNW 109 HSP 2 Score: 42.3578 bits (98), Expect = 9.445e-22 Identity = 28/84 (33.33%), Postives = 45/84 (53.57%), Query Frame = 1 Query: 304 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKN-ALKSGEEEEIYLPDTIDVGNSSQPRSSG 552 +++GNK D+D + R V K +A A + I +FETSAK +NVEE F I ++ + + + P TI + + Q +G Sbjct: 124 ILVGNKADMDE-SKRAVPTAKGQA-LADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQRLSDTDSRAEPATIKISQTDQAAGAG 205 The following BLAST results are available for this feature:
BLAST of DR908229 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908229 ID=DR908229; Name=DR908229; organism=Citrus sinensis; type=EST; length=689bpback to top |