DR908209

Overview
NameDR908209
Unique NameDR908209
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length695
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DR908209 vs. ExPASy Swiss-Prot
Match: MEF2D_RAT (Myocyte-specific enhancer factor 2D OS=Rattus norvegicus GN=Mef2d PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.481e-15
Identity = 38/74 (51.35%), Postives = 58/74 (78.38%), Query Frame = 2 
Query:   92 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSSMKEILEKHRVHSK 313
            M R+KIQI++I +   RQVTF+KR+ G+ KKA ELSVLCD ++ALIIF+ + KLF+Y+S+ M ++L K+  +++
Sbjct:    1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYASTDMDKVLLKYTEYNE 74
[Close]
BLAST of DR908209 vs. ExPASy Swiss-Prot
Match: MEF2D_MOUSE (Myocyte-specific enhancer factor 2D OS=Mus musculus GN=Mef2d PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.481e-15
Identity = 38/74 (51.35%), Postives = 58/74 (78.38%), Query Frame = 2 
Query:   92 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSSMKEILEKHRVHSK 313
            M R+KIQI++I +   RQVTF+KR+ G+ KKA ELSVLCD ++ALIIF+ + KLF+Y+S+ M ++L K+  +++
Sbjct:    1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYASTDMDKVLLKYTEYNE 74
[Close]
BLAST of DR908209 vs. ExPASy Swiss-Prot
Match: MEF2D_HUMAN (Myocyte-specific enhancer factor 2D OS=Homo sapiens GN=MEF2D PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.481e-15
Identity = 38/74 (51.35%), Postives = 58/74 (78.38%), Query Frame = 2 
Query:   92 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSSMKEILEKHRVHSK 313
            M R+KIQI++I +   RQVTF+KR+ G+ KKA ELSVLCD ++ALIIF+ + KLF+Y+S+ M ++L K+  +++
Sbjct:    1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYASTDMDKVLLKYTEYNE 74
[Close]
BLAST of DR908209 vs. ExPASy Swiss-Prot
Match: MEF2A_XENLA (Myocyte-specific enhancer factor 2A homolog OS=Xenopus laevis GN=mef2a PE=1 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.238e-14
Identity = 38/74 (51.35%), Postives = 58/74 (78.38%), Query Frame = 2 
Query:   92 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSSMKEILEKHRVHSK 313
            M R+KIQI +I +   RQVTF+KR+ G+ KKA ELSVLCD ++ALIIF+++ KLF+Y+S+ M ++L K+  +++
Sbjct:    1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYASTDMDKVLLKYTEYNE 74
[Close]
BLAST of DR908209 vs. ExPASy Swiss-Prot
Match: MEF2A_RAT (Myocyte-specific enhancer factor 2A OS=Rattus norvegicus GN=Mef2a PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.238e-14
Identity = 38/74 (51.35%), Postives = 58/74 (78.38%), Query Frame = 2 
Query:   92 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSSMKEILEKHRVHSK 313
            M R+KIQI +I +   RQVTF+KR+ G+ KKA ELSVLCD ++ALIIF+++ KLF+Y+S+ M ++L K+  +++
Sbjct:    1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYASTDMDKVLLKYTEYNE 74
[Close]
BLAST of DR908209 vs. ExPASy Swiss-Prot
Match: MEF2A_PONAB (Myocyte-specific enhancer factor 2A OS=Pongo abelii GN=MEF2A PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.238e-14
Identity = 38/74 (51.35%), Postives = 58/74 (78.38%), Query Frame = 2 
Query:   92 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSSMKEILEKHRVHSK 313
            M R+KIQI +I +   RQVTF+KR+ G+ KKA ELSVLCD ++ALIIF+++ KLF+Y+S+ M ++L K+  +++
Sbjct:    1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYASTDMDKVLLKYTEYNE 74
[Close]
BLAST of DR908209 vs. ExPASy Swiss-Prot
Match: MEF2A_PIG (Myocyte-specific enhancer factor 2A OS=Sus scrofa GN=MEF2A PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.238e-14
Identity = 38/74 (51.35%), Postives = 58/74 (78.38%), Query Frame = 2 
Query:   92 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSSMKEILEKHRVHSK 313
            M R+KIQI +I +   RQVTF+KR+ G+ KKA ELSVLCD ++ALIIF+++ KLF+Y+S+ M ++L K+  +++
Sbjct:    1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYASTDMDKVLLKYTEYNE 74
[Close]
BLAST of DR908209 vs. ExPASy Swiss-Prot
Match: MEF2A_MOUSE (Myocyte-specific enhancer factor 2A OS=Mus musculus GN=Mef2a PE=1 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.238e-14
Identity = 38/74 (51.35%), Postives = 58/74 (78.38%), Query Frame = 2 
Query:   92 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSSMKEILEKHRVHSK 313
            M R+KIQI +I +   RQVTF+KR+ G+ KKA ELSVLCD ++ALIIF+++ KLF+Y+S+ M ++L K+  +++
Sbjct:    1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYASTDMDKVLLKYTEYNE 74
[Close]
BLAST of DR908209 vs. ExPASy Swiss-Prot
Match: MEF2A_HUMAN (Myocyte-specific enhancer factor 2A OS=Homo sapiens GN=MEF2A PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.238e-14
Identity = 38/74 (51.35%), Postives = 58/74 (78.38%), Query Frame = 2 
Query:   92 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSSMKEILEKHRVHSK 313
            M R+KIQI +I +   RQVTF+KR+ G+ KKA ELSVLCD ++ALIIF+++ KLF+Y+S+ M ++L K+  +++
Sbjct:    1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYASTDMDKVLLKYTEYNE 74
[Close]
BLAST of DR908209 vs. ExPASy Swiss-Prot
Match: MEF2A_CHICK (Myocyte-specific enhancer factor 2A OS=Gallus gallus GN=MEF2A PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.238e-14
Identity = 38/74 (51.35%), Postives = 58/74 (78.38%), Query Frame = 2 
Query:   92 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSSMKEILEKHRVHSK 313
            M R+KIQI +I +   RQVTF+KR+ G+ KKA ELSVLCD ++ALIIF+++ KLF+Y+S+ M ++L K+  +++
Sbjct:    1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYASTDMDKVLLKYTEYNE 74
The following BLAST results are available for this feature:
BLAST of DR908209 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 120
Match NameE-valueIdentityDescription
MEF2D_RAT9.481e-1551.35Myocyte-specific enhancer factor 2D OS=Rattus norv... [more]
MEF2D_MOUSE9.481e-1551.35Myocyte-specific enhancer factor 2D OS=Mus musculu... [more]
MEF2D_HUMAN9.481e-1551.35Myocyte-specific enhancer factor 2D OS=Homo sapien... [more]
MEF2A_XENLA1.238e-1451.35Myocyte-specific enhancer factor 2A homolog OS=Xen... [more]
MEF2A_RAT1.238e-1451.35Myocyte-specific enhancer factor 2A OS=Rattus norv... [more]
MEF2A_PONAB1.238e-1451.35Myocyte-specific enhancer factor 2A OS=Pongo abeli... [more]
MEF2A_PIG1.238e-1451.35Myocyte-specific enhancer factor 2A OS=Sus scrofa ... [more]
MEF2A_MOUSE1.238e-1451.35Myocyte-specific enhancer factor 2A OS=Mus musculu... [more]
MEF2A_HUMAN1.238e-1451.35Myocyte-specific enhancer factor 2A OS=Homo sapien... [more]
MEF2A_CHICK1.238e-1451.35Myocyte-specific enhancer factor 2A OS=Gallus gall... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16337 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-53_G04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908209 ID=DR908209; Name=DR908209; organism=Citrus sinensis; type=EST; length=695bp
CAATATACAAACTCGAGAGCTTTTTATTTCATATAGTTATTCTTTTTCAG
GAAGATCACAGCAGTAACAGCTAGCAAGCAAGCGCAAAGAAATGGCGAGA
GAAAAGATTCAGATCAAGAAAATTGACAACGCAACGGCGAGGCAAGTCAC
TTTCTCTAAGAGACGAAGAGGGATTTTCAAGAAAGCTGAAGAGCTTTCTG
TTCTTTGCGATGCCGATGTTGCTCTGATCATCTTCTCCGCCACAGGCAAG
CTCTTCGAATATTCCAGCTCAAGCATGAAGGAAATCTTAGAAAAGCACCG
TGTGCACTCAAAGAACCTTGAGAGGGTGGATCAACCATCTGTTGAGTTGC
AGCTGTTGGAGAACAACAACTACTCCATGTTGTTCAAGGAAGCTGCCGAA
AAAAGCCATCTGCTGAGGCAAATGAGAGGTGAGGAGATCCATGGATTAAG
TTTAGAAGAATTGCAGAGGCTTGAAAGGTCTCTTGAAGTTGGATTGGGAC
GAGTGATAGAAAAGAAGGAAGAAAAGATTACAAAGGAGATTAATGAACTC
CCAAGAAGGGGAAAGTTATTGATGGAGGAGAATGAGCGATTAAGACAGCA
AGTGGCGGAGGTATCAAATGCATACGGTGAAGAAGGCCAGTCCTCAGAGT
CTGTTAATAATATATGCATTTCATCAACGCGCCTCCCCTGAATCT
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