DR908209

Overview
NameDR908209
Unique NameDR908209
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length695
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908209 vs. ExPASy Swiss-Prot
Match: AGL5_ARATH (Agamous-like MADS-box protein AGL5 OS=Arabidopsis thaliana GN=AGL5 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.495e-20
Identity = 60/191 (31.41%), Postives = 100/191 (52.36%), Query Frame = 2
Query:   68 QLASKRKEMAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSSMKEILEKHRVHSKNLERVDQPSVELQLLE--NNNYSMLFKEAAEKSHLLRQMRGEEIHGXXXXXXXXXXXXXXVGLGRVXXXXXXXXXXXXNELPRRGKLLMEENERLRQQVAEVSNAYGEE 634
            ++A   K++ R KI+IK+I+N T RQVTF KRR G+ KKA ELSVLCDA+VAL+IFS  G+L+EY+++S++  +E+++      + V+ P++     +      S L ++  +  +L R + GE +                 G+ RV              + +R   L  +N  LR ++ E +    +E
Sbjct:    8 EVAESSKKIGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYANNSVRGTIERYKKACS--DAVNPPTITEANTQYYQQEASKLRRQIRDIQNLNRHILGESLGSLNFKELKNLESRLEKGISRVRSKKHEMLVAEIEYMQKREIELQNDNMYLRSKITERTGLQQQE 196          
BLAST of DR908209 vs. ExPASy Swiss-Prot
Match: AGL8_ARATH (Agamous-like MADS-box protein AGL8 OS=Arabidopsis thaliana GN=AGL8 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.788e-20
Identity = 71/209 (33.97%), Postives = 105/209 (50.24%), Query Frame = 2
Query:   92 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSS-MKEILEKHRVH---SKNLERVDQPSVELQLLENNNYSMLFKEAAEKSHLLRQMRGEEIHGXXXXXXXXXXXXXXVGLGRVXXXXXXXXXXXXNELPRRGKLLMEENERLRQQVAEVSNAYG-EEGQ-------SSESVNNICISSTR 682
            M R ++Q+K+I+N   RQVTFSKRR G+ KKA E+SVLCDA+VALI+FS+ GKLFEYS+ S M+ ILE++  +    K L   D    E  +LE+        E  EK+   R   GE++                  +  +            + L ++ K L + N  L +++ E     G +EGQ       SS  +   C++S+R
Sbjct:    1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSSKGKLFEYSTDSCMERILERYDRYLYSDKQLVGRDVSQSENWVLEHAKLKARV-EVLEKNK--RNFMGEDLDSLSLKELQSLEHQLDAAIKSIRSRKNQAMFESISALQKKDKALQDHNNSLLKKIKEREKKTGQQEGQLVQCSNSSSVLLPQYCVTSSR 206          
BLAST of DR908209 vs. ExPASy Swiss-Prot
Match: AG_BRANA (Floral homeotic protein AGAMOUS OS=Brassica napus GN=AG1 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.278e-19
Identity = 60/180 (33.33%), Postives = 97/180 (53.89%), Query Frame = 2
Query:   74 ASKRKEMAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSSMKEILEKH-RVHSKNLERVDQPSVELQLLENNNYSMLFKEAAEKSHLLRQMRGEEIHGXXXXXXXXXXXXXXVGLGRVXXXXXXXXXXXXNELPRRGKLLMEENERLRQQVAE 610
            +S +++  R KI+IK+I+N T RQVTF KRR G+ KKA ELSVLCDA+VALI+FS+ G+L+EYS++S+K  +E++ +  S N        +  Q  +  + + L ++     +  RQ+ GE I                  + R+            + + +R   L  +N+ LR ++AE
Sbjct:   11 SSPQRKAGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNSVKGTIERYKKAISDNSNTGSVAEINAQYYQQES-AKLRQQIISIQNSNRQLMGETIGSMSPKELRNLEGRLDRSVNRIRSKKNELLFAEIDYMQKREVDLHNDNQLLRAKIAE 189          
BLAST of DR908209 vs. ExPASy Swiss-Prot
Match: AGL8_SINAL (Agamous-like MADS-box protein AGL8 homolog OS=Sinapis alba GN=AGL8 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.181e-19
Identity = 70/209 (33.49%), Postives = 106/209 (50.72%), Query Frame = 2
Query:   92 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSS-MKEILEKHRVH---SKNLERVDQPSVELQLLENNNYSMLFKEAAEKSHLLRQMRGEEIHGXXXXXXXXXXXXXXVGLGRVXXXXXXXXXXXXNELPRRGKLLMEENERLRQQVAE-VSNAYGEEGQSSESVNN-------ICISSTR 682
            M R ++Q+K+I+N   RQVTFSKRR G+ KKA E+SVLCDA+VAL+IFS+ GKLFEYS+ S M++ILE++  +    K L   D    E  +LE+        E  EK+   R   GE++                  +  +            + L ++ K+L + N  L +++ E   N   +E Q  +  NN        C++S+R
Sbjct:    1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALVIFSSKGKLFEYSTDSCMEKILERYDRYLYSDKQLVGRDISQSENWVLEHAKLKARV-EVLEKNK--RNFMGEDLDSLSLKELQSLEHQLHAAIKSIRSRKNQAMFESISALQKKDKVLQDHNNALLKKIKEREKNTVHQEVQLIQCSNNSSILQPQYCLTSSR 206          
BLAST of DR908209 vs. ExPASy Swiss-Prot
Match: AGL15_BRANA (Agamous-like MADS-box protein AGL15 OS=Brassica napus GN=AGL15 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.181e-19
Identity = 46/69 (66.67%), Postives = 60/69 (86.96%), Query Frame = 2
Query:   92 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSSMKEILEKH 298
            M R KI+IK+I+NA +RQVTFSKRR G+ KKA ELSVLCDA+VA+I+FS +GKLFE+SS+SMK+ L ++
Sbjct:    1 MGRGKIEIKRIENANSRQVTFSKRRAGLLKKAHELSVLCDAEVAVIVFSKSGKLFEFSSTSMKKTLLRY 69          
BLAST of DR908209 vs. ExPASy Swiss-Prot
Match: AGL3_ARATH (Agamous-like MADS-box protein AGL3 OS=Arabidopsis thaliana GN=AGL3 PE=1 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 2.848e-19
Identity = 59/175 (33.71%), Postives = 93/175 (53.14%), Query Frame = 2
Query:   92 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEY--SSSSMKEILEKHRVHSKNLERVDQPSVELQLLENNNYSMLFKEAAEKSHLLRQMRGEEIHGXXXXXXXXXXXXXXVGLGRVXXXXXXXXXXXXNELPRRGKLLMEENERLRQQVAE 610
            M R K+++K+I+N   RQVTF+KRR G+ KKA ELSVLCDA++AL+IFS  GKL+E+  S S M   ++K+R HS      +Q + +LQ  +  +Y  L        H  R + GEE+                  L ++            ++L  + ++L+E N  LR+++ +
Sbjct:    1 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEIALLIFSNRGKLYEFCSSPSGMARTVDKYRKHSYATMDPNQSAKDLQ-DKYQDYLKLKSRVEILQHSQRHLLGEELSEMDVNELEHLERQVDASLRQIRSTKARSMLDQLSDLKTKEEMLLETNRDLRRKLED 174          
BLAST of DR908209 vs. ExPASy Swiss-Prot
Match: AGL19_ARATH (Agamous-like MADS-box protein AGL19 OS=Arabidopsis thaliana GN=AGL19 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.848e-19
Identity = 64/193 (33.16%), Postives = 100/193 (51.81%), Query Frame = 2
Query:   92 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSSMKEILEKHRVHSKNLERVDQPSVELQLLENNNYSMLFKEAAEKSHLLRQMRGEEIHGXXXXXXXXXXXXXXVGLGRVXXXXXXXXXXXXNELPRRGKLLMEENERLRQQVAEVSNAYGEEGQSSESVNNICI 670
            M R K ++K+I+NAT+RQVTFSKRR G+ KKA ELSVLCDA+VAL+IFS   KL+E+SSSS+   +E+++   K +    + +   Q   +   S L K+  +     R++ GE I                  L R+             +L    + L++EN+ L+++   +  A     QS+ S + + I
Sbjct:    1 MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALVIFSPRSKLYEFSSSSIAATIERYQRRIKEIGNNHKRNDNSQQARDET-SGLTKKIEQLEISKRKLLGEGIDACSIEELQQLENQLDRSLSRIRAKKYQLLREEIEKLKAEERNLVKENKDLKEKWLGMGTATIASSQSTLSSSEVNI 192          
BLAST of DR908209 vs. ExPASy Swiss-Prot
Match: MAD56_ORYSJ (MADS-box transcription factor 56 OS=Oryza sativa subsp. japonica GN=MADS56 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.720e-19
Identity = 55/170 (32.35%), Postives = 100/170 (58.82%), Query Frame = 2
Query:   92 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSS-SMKEILEKHRVHSKNLERVDQPSVELQLLENNNYSMLFK-EAAEKSHLLRQMRGEEIHGXXXXXXXXXXXXXXVGLGRVXXXXXXXXXXXXNELPRRGKLLMEENERLR 595
            M R + ++K+I+N T+RQVTFSKRR G+ KKA ELSVLCDA+VALI+FS  G+L+E++S+ S+++ +++++ ++K+         ++Q ++++   +  K EA ++S   R++ GE + G                L ++             +L  + + L+++NE LR
Sbjct:    1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASAPSLQKTIDRYKAYTKDHVNNKTIQQDIQQVKDDTLGLAKKLEALDESR--RKILGENLEGFSIEELRGLEMKLEKSLHKIRLKKTELLEQQIAKLKEKERTLLKDNENLR 168          
BLAST of DR908209 vs. ExPASy Swiss-Prot
Match: MAD50_ORYSJ (MADS-box transcription factor 50 OS=Oryza sativa subsp. japonica GN=MADS50 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.858e-19
Identity = 44/74 (59.46%), Postives = 62/74 (83.78%), Query Frame = 2
Query:   92 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSSMKEILEKHRVHSK 313
            M R K Q+K+I+N T+RQVTFSKRR G+ KKA ELSVLCDA+VALI+FS  GKL+E++S+S ++ +E++R ++K
Sbjct:    1 MVRGKTQMKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASASTQKTIERYRTYTK 74          
BLAST of DR908209 vs. ExPASy Swiss-Prot
Match: AG_ARATH (Floral homeotic protein AGAMOUS OS=Arabidopsis thaliana GN=AG PE=1 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 4.858e-19
Identity = 60/180 (33.33%), Postives = 96/180 (53.33%), Query Frame = 2
Query:   74 ASKRKEMAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSSMKEILEKH-RVHSKNLERVDQPSVELQLLENNNYSMLFKEAAEKSHLLRQMRGEEIHGXXXXXXXXXXXXXXVGLGRVXXXXXXXXXXXXNELPRRGKLLMEENERLRQQVAE 610
            +S  ++  R KI+IK+I+N T RQVTF KRR G+ KKA ELSVLCDA+VALI+FS+ G+L+EYS++S+K  +E++ +  S N        +  Q  +  + + L ++     +  RQ+ GE I                  + R+            + + +R   L  +N+ LR ++AE
Sbjct:   11 SSPLRKSGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNSVKGTIERYKKAISDNSNTGSVAEINAQYYQQES-AKLRQQIISIQNSNRQLMGETIGSMSPKELRNLEGRLERSITRIRSKKNELLFSEIDYMQKREVDLHNDNQILRAKIAE 189          
The following BLAST results are available for this feature:
BLAST of DR908209 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 120
Match NameE-valueIdentityDescription
AGL5_ARATH7.495e-2031.41Agamous-like MADS-box protein AGL5 OS=Arabidopsis ... [more]
AGL8_ARATH9.788e-2033.97Agamous-like MADS-box protein AGL8 OS=Arabidopsis ... [more]
AG_BRANA1.278e-1933.33Floral homeotic protein AGAMOUS OS=Brassica napus ... [more]
AGL8_SINAL2.181e-1933.49Agamous-like MADS-box protein AGL8 homolog OS=Sina... [more]
AGL15_BRANA2.181e-1966.67Agamous-like MADS-box protein AGL15 OS=Brassica na... [more]
AGL3_ARATH2.848e-1933.71Agamous-like MADS-box protein AGL3 OS=Arabidopsis ... [more]
AGL19_ARATH2.848e-1933.16Agamous-like MADS-box protein AGL19 OS=Arabidopsis... [more]
MAD56_ORYSJ3.720e-1932.35MADS-box transcription factor 56 OS=Oryza sativa s... [more]
MAD50_ORYSJ4.858e-1959.46MADS-box transcription factor 50 OS=Oryza sativa s... [more]
AG_ARATH4.858e-1933.33Floral homeotic protein AGAMOUS OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16337 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-53_G04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908209 ID=DR908209; Name=DR908209; organism=Citrus sinensis; type=EST; length=695bp
CAATATACAAACTCGAGAGCTTTTTATTTCATATAGTTATTCTTTTTCAG
GAAGATCACAGCAGTAACAGCTAGCAAGCAAGCGCAAAGAAATGGCGAGA
GAAAAGATTCAGATCAAGAAAATTGACAACGCAACGGCGAGGCAAGTCAC
TTTCTCTAAGAGACGAAGAGGGATTTTCAAGAAAGCTGAAGAGCTTTCTG
TTCTTTGCGATGCCGATGTTGCTCTGATCATCTTCTCCGCCACAGGCAAG
CTCTTCGAATATTCCAGCTCAAGCATGAAGGAAATCTTAGAAAAGCACCG
TGTGCACTCAAAGAACCTTGAGAGGGTGGATCAACCATCTGTTGAGTTGC
AGCTGTTGGAGAACAACAACTACTCCATGTTGTTCAAGGAAGCTGCCGAA
AAAAGCCATCTGCTGAGGCAAATGAGAGGTGAGGAGATCCATGGATTAAG
TTTAGAAGAATTGCAGAGGCTTGAAAGGTCTCTTGAAGTTGGATTGGGAC
GAGTGATAGAAAAGAAGGAAGAAAAGATTACAAAGGAGATTAATGAACTC
CCAAGAAGGGGAAAGTTATTGATGGAGGAGAATGAGCGATTAAGACAGCA
AGTGGCGGAGGTATCAAATGCATACGGTGAAGAAGGCCAGTCCTCAGAGT
CTGTTAATAATATATGCATTTCATCAACGCGCCTCCCCTGAATCT
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