DR908206
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908206 vs. ExPASy Swiss-Prot
Match: QRT2_ARATH (Polygalacturonase QRT2 OS=Arabidopsis thaliana GN=QRT2 PE=1 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.048e-13 Identity = 54/222 (24.32%), Postives = 103/222 (46.40%), Query Frame = 1 Query: 1 DGQGALWWQQFHKGKLKYT---RPYLIEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATI-ALGSEMSGG-IQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDI 651 DG G +WW + K + P + F+ +N+++S++ L N+ ++ N+ + + +P SPNTDGI+ N I+D + +GDDC+++ SG ++ + +TC + +I +LG + S + +V I T +GVRIKT G G K+I + + M + + +Y + + K+ + + Y++I Sbjct: 170 DGNGHIWWPKSCKINPQLPCLGAPTAVTFVECNNLRVSNIRLENAQQMHLTFQDCKNVKALNLMVTSPADSPNTDGIHVSGTQNILIQDSIVRTGDDCISIVSG-----------SENVRATGITCGPGHGISIGSLGEDNSEAYVSNVVVNKATLIGTTNGVRIKTWQGGHGMAKNIIFQDIIMKNVTNPIIINQDYCDRVEACPEQKSAVQVSNVLYKNI 380
BLAST of DR908206 vs. ExPASy Swiss-Prot
Match: PGLR1_ARATH (Exopolygalacturonase clone GBGE184 OS=Arabidopsis thaliana GN=PGA3 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.369e-13 Identity = 54/199 (27.14%), Postives = 96/199 (48.24%), Query Frame = 1 Query: 4 GQGALWWQQFHKGKLKYTR--PYLIEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATI-ALGS-EMSGGIQDVRAEDIKAINTESGVRIKTAVGRG-GYVKDIYVRGMTMHTMKWAFWMTGNYGS 585 G+G W+ GK P ++F N++I+ ++ +N+ ++++ V + N+ +Q I + AP SPNTDGI+ + N I D I +GDDCV+V G + + + R+ C + ++ +LG + + + + I T++G+RIKT G DI + M ++K + NYGS Sbjct: 148 GKGEAVWKADGCGKKVQCNLPPTSLKFRNMKNVEINGISSVNAKAFHMFLVKTENVNIQNIKLTAPAESPNTDGIHLSNADNVSILDSTIATGDDCVSV-----------GRGSNNVTVERVICGPGHGLSVGSLGKYKNEEDVSGIHVNNCTMIETDNGLRIKTWGGSDPSKAVDIKFENIIMQSVKNPIIIDQNYGS 335
BLAST of DR908206 vs. ExPASy Swiss-Prot
Match: PGLR_GOSBA (Polygalacturonase OS=Gossypium barbadense GN=G9 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.050e-13 Identity = 53/188 (28.19%), Postives = 93/188 (49.47%), Query Frame = 1 Query: 1 DGQGALWWQQ--FHKGKLKYTRPYLIEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATI-ALGS-EMSGGIQDVRAEDIKAINTESGVRIKTAVG-RGGYVKDIYVRGMTMHTM 549 DGQG++ +++ + + P I F + N I +T +S ++++ NI ++ + I AP SPNTDGI+ I I +GDDC+++ G TK +VI+ +TC + +I +LG + ++ ++ + NT +G RIKT G GG V +I+ +TM+ + Sbjct: 127 DGQGSIAYEKNTCENREFRSKLPVNIRFDFVTNALIQDITSKDSKLFHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISIGDG-----------TKNMVIKEITCGPGHGISIGSLGKFQNEEPVEGIKISNCTITNTSNGARIKTWPGEHGGAVSEIHFEDITMNNV 303
BLAST of DR908206 vs. ExPASy Swiss-Prot
Match: PGLR_GOSHI (Polygalacturonase OS=Gossypium hirsutum GN=G9 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.983e-13 Identity = 53/188 (28.19%), Postives = 93/188 (49.47%), Query Frame = 1 Query: 1 DGQGALWWQQ--FHKGKLKYTRPYLIEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATI-ALGS-EMSGGIQDVRAEDIKAINTESGVRIKTAVG-RGGYVKDIYVRGMTMHTM 549 DGQG++ +++ + + P I F + N I +T +S ++++ NI ++ + I AP SPNTDGI+ I I +GDDC+++ G TK +VI+ +TC + +I +LG + ++ ++ + NT +G RIKT G GG V +I+ +TM+ + Sbjct: 127 DGQGSIAYEKNTCENREFRSKLPVNIRFDFLTNALIQDITSKDSKLFHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISIGDG-----------TKNMVIKEITCGPGHGISIGSLGKFQNEEPVEGIKISNCTITNTSNGARIKTWPGEHGGAVSEIHFEDITMNNV 303
BLAST of DR908206 vs. ExPASy Swiss-Prot
Match: PGLR_BRANA (Polygalacturonase OS=Brassica napus PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.202e-13 Identity = 50/168 (29.76%), Postives = 82/168 (48.81%), Query Frame = 1 Query: 1 DGQGALWWQ--QFHKGKLKYTRPYLIEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGG----IQDVRAEDIKAINTESGVRIKT 486 DG+G W+ HK P + F + DN +I +T L++ +++ + + N+ I IIAP SPNTDGI+ C +I + I +GDDC++V G K L+I ++ C + I++GS G + D+ ++ T +G+RIKT Sbjct: 116 DGEGNAAWKANNCHKTFECKKLPISVRFDFVDNAEIKDVTSLDAKNFHFNVISGKNMTFDNIKIIAPAESPNTDGIHLGRCEGVKILNTKIATGDDCISVGDG-----------MKNLLIEKVVCGPGHG--ISVGSLGRYGWEQDVTDITVKNCTLEGTSNGLRIKT 270
BLAST of DR908206 vs. ExPASy Swiss-Prot
Match: PGLR_PERAE (Polygalacturonase OS=Persea americana PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.874e-13 Identity = 54/231 (23.38%), Postives = 101/231 (43.72%), Query Frame = 1 Query: 1 DGQGALWWQQFHKGKLKY---TRPYLIEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATI-ALGSEMS-GGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAA 678 +G G WW K K + P + F N+ +S L++ +S ++ +++ + + AP SPNTDGI+ + + I +GDDC++++SG +K ++ +TC + +I +LG S + V + +T +G+RIKT G G K+I + + MH + + Y D + ++ + + Y +I + S A Sbjct: 183 NGNGETWWDSSCKRKKSLPCKSAPTALTFRSCKNLIVSDLSIKDSQKMHLSFDKCQDVIASNLMVTAPEHSPNTDGIHITGTQRIHVMNSVIGTGDDCISIESG-----------SKMVIATNITCGPGHGISIGSLGDRNSEAHVSGVLVDGGNLFDTTNGLRIKTWQGGSGSAKNIKFQNIVMHNVTNPIIIDQYYCDSKDPCPEQESAVKVSNVAYMNIRGTSASEVA 402
BLAST of DR908206 vs. ExPASy Swiss-Prot
Match: PGLR6_ARATH (Probable polygalacturonase At2g43860 OS=Arabidopsis thaliana GN=At2g43860 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.874e-13 Identity = 59/221 (26.70%), Postives = 107/221 (48.42%), Query Frame = 1 Query: 1 DGQG-ALWWQQFHKGKLKYTRPYLIEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATI-ALG-SEMSGGIQDVRAEDIKAINTESGVRIKT-AVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDI 651 D QG +LW + + G T + F ++NI+IS LT +NS +++ S+N+ + G+ + A SPNTDGI+ +S + I + I +GDDC+++ G + + I+ + C + +I +LG +E G+ +V ++ + T +GVRIKT + ++I + + M +K + +Y H + V + Y DI Sbjct: 132 DAQGTSLWKCKNNGGHNCPTGAKSLVFSGSNNIKISGLTSINSQKFHIVIDNSNNVNIDGVKVSADENSPNTDGIHVESSHSVHITNSRIGTGDDCISIGPG-----------STNVFIQTIRCGPGHGISIGSLGRAEEEQGVDNVTVSNVDFMGTNNGVRIKTWGKDSNSFARNIVFQHINMKMVKNPIIIDQHYCLHKPCPKQESGVKV-SNVRYEDI 340
BLAST of DR908206 vs. ExPASy Swiss-Prot
Match: PGLR5_ARATH (Probable polygalacturonase At1g80170 OS=Arabidopsis thaliana GN=At1g80170 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.977e-12 Identity = 48/188 (25.53%), Postives = 88/188 (46.81%), Query Frame = 1 Query: 1 DGQGALWWQQFHKGKLKYT---RPYLIEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATI-ALGSEMS-GGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTM 549 +G G WW++ K P + F N+++ +L +++S ++ + + G+ +IAP TSPNTDGI+ I++ + +GDDC+++ + Q+ I + C + +I +LG S ++D+ + +T +GVRIKT G G V I R + M+ + Sbjct: 154 NGMGQEWWERSCKHNHSNPCRGAPTALTFHKCKNMRVENLNVIDSQQMHIALTSCRRVTISGLKVIAPATSPNTDGIHISVSRGIVIDNTTVSTGDDCISIVKN-----------STQISISNIICGPGHGISIGSLGKSKSWEEVRDITVDTAIISDTANGVRIKTWQGGSGLVSKIIFRNIKMNNV 330
BLAST of DR908206 vs. ExPASy Swiss-Prot
Match: PGLR_TOBAC (Polygalacturonase OS=Nicotiana tabacum GN=PG1 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.404e-12 Identity = 53/177 (29.94%), Postives = 80/177 (45.20%), Query Frame = 1 Query: 1 DGQGALWWQQFHKGKLKYTRPYLIEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIAL--GSEMSGGIQDVRAEDIKAINTESGVRIKT-AVGRGGYVKDIY 522 DGQ A W+ K P + F N I +T L+S S++V+ N+ + AP SPNTDGI+ ++ I D +GDDC++V G T+QL I R+TC + ++ G+ + V + NT++GVRIKT G V D++ Sbjct: 122 DGQAAAAWECKQSKKCNKL-PNNLSFNSLTNSTIKDITTLDSKSFHVNVNQCKNLTFIRFNVSAPANSPNTDGIHVSRSSSVNITDSNFSTGDDCISV-----------GDETEQLYITRVTCGPGHGISVGSLGGNPDEKPVVGVFVRNCTFTNTDNGVRIKTWPASHPGVVNDVH 286
BLAST of DR908206 vs. ExPASy Swiss-Prot
Match: PGLR_PRUPE (Polygalacturonase OS=Prunus persica PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.512e-12 Identity = 64/230 (27.83%), Postives = 109/230 (47.39%), Query Frame = 1 Query: 1 DGQG-ALWWQQFHKGKLKYTRPYLIEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATI-ALGSEM-SGGIQDVRAEDIKAINTESGVRIKTAVGR--GGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHY--DPKALP-VIQGINYRDIVADNV 666 DGQG ALW + G+ + + F ++NI +S L LNS +++ N+ +QG+ + SPNTDGI+ + I + I +GDDCV++ G T L I + C + +I +LG E G+Q+V + + T++G+RIK + GR G+ ++I + TM ++ + D HY D K P + G+ D+ +++ Sbjct: 126 DGQGTALWACKACHGESCPSGATTLGFSDSNNIVVSGLASLNSQMFHIVINDFQNVQMQGVRVSRSGNSPNTDGIHVQMSSGVTILNSKIATGDDCVSIGPG-----------TSNLWIEGVACGPGHGISIGSLGKEQEEAGVQNVTVKTVTFSGTQNGLRIK-SWGRPSTGFARNILFQHATMVNVENPIVI--------DQHYCPDNKGCPGQVSGVQISDVTYEDI 335 The following BLAST results are available for this feature:
BLAST of DR908206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908206 ID=DR908206; Name=DR908206; organism=Citrus sinensis; type=EST; length=695bpback to top |