DR908206
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908206 vs. ExPASy Swiss-Prot
Match: PGLR4_ARATH (Polygalacturonase At1g48100 OS=Arabidopsis thaliana GN=At1g48100 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.512e-12 Identity = 54/228 (23.68%), Postives = 105/228 (46.05%), Query Frame = 1 Query: 1 DGQGALWWQ---QFHKG------KLKYTRPYLIEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATI-ALGSEMSGG-IQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDI 651 +G G WW + H+G P +I F ++NI++ L + NSP +++ +L+ I I +P SPNTDGI+ + + I + + +GDDC+++ +G + + I+ +TC + +I +LG S + ++ + ++++G+R+KT G G V ++ + M + + Y D + A+ V + YR+I Sbjct: 181 EGNGQKWWDLPCKPHRGPDGSSSSGPCASPTMIRFFMSNNIEVKGLRIQNSPQFHMKFDGCQGVLINEIQISSPKLSPNTDGIHLGNTRSVGIYNSVVSNGDDCISIGTGCSD-----------VDIQGVTCGPSHGISIGSLGVHNSQACVSNITVRNTVIRDSDNGLRVKTWQGGTGSVSNLLFENIQMENVLNCIIVDQYYCQSKDCRNETSAVKVFD-VEYRNI 396
BLAST of DR908206 vs. ExPASy Swiss-Prot
Match: PGLR_MALDO (Polygalacturonase OS=Malus domestica PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.811e-12 Identity = 59/234 (25.21%), Postives = 108/234 (46.15%), Query Frame = 1 Query: 1 DGQGALWWQQFHKGKLKYT----RPYLIEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQG--ITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQD----VRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSH-ADNHYDPKALPVIQGINYRDIVADNVS 669 +G G +WW+ K K + P + F +N+ + +L + ++ +H ++ + I VQ +T+ AP SPNTDGI+ + N I I +GDDC+++ SG ++++ +TC + I++GS G +D V K T +G+RIKT G G +I + + M+ + + NY H + K+ ++ + Y++I + S Sbjct: 196 NGNGNIWWKNSCKIKPQPPCGTYAPTAVTFNRCNNLVVKNLNIQDAQQ--IHVIFQNCINVQASCLTVTAPEDSPNTDGIHVTNTQNITISSSVIGTGDDCISIVSG-----------SQRVQATDITCGPGHG--ISIGSLGEDGSEDHVSGVFVNGAKLSGTSNGLRIKTWKGGSGSATNIVFQNVQMNDVTNPIIIDQNYCDHKTKDCKQQKSAVQVKNVLYQNIRGTSAS 414
BLAST of DR908206 vs. ExPASy Swiss-Prot
Match: PGLR_YEAST (Polygalacturonase OS=Saccharomyces cerevisiae GN=PGU1 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.186e-11 Identity = 60/240 (25.00%), Postives = 104/240 (43.33%), Query Frame = 1 Query: 1 DGQGALWWQQF-HKGKLKYTRPYLIEFMYTDNIQISSLTLLNSPSWNVHPVYS----SNILVQGITIIA----PVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATI-ALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDI-YVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLE 687 DGQGA WW GK+K P ++ T +++ L + N+P H V+S S++ + ITI NTDG + S +N I+ C + + DDC+AV SG + C + + ++ ++G + AE+ IN+++G+RIKT G G V ++ ++ + + G+Y + +P I + +DI S A R++ Sbjct: 106 DGQGAKWWDGLGDSGKVK---PKFVKLALTGTSKVTGLNIKNAP----HQVFSINKCSDLTISDITIDIRDGDSAGGHNTDGFDVGSSSNVLIQGCTVYNQDDCIAVNSG------------STIKFMNNYCYNGHGISVGSVGGRSDNTVNGFWAENNHVINSDNGLRIKTVEGATGTVTNVNFISNKISGIKSYGIVIEGDYLNSKTTGTATGGVP-ISNLVMKDITGSVNSTAKRVK 325
BLAST of DR908206 vs. ExPASy Swiss-Prot
Match: PGLR2_PECCC (Endo-polygalacturonase OS=Pectobacterium carotovorum subsp. carotovorum GN=pehA PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.855e-11 Identity = 60/193 (31.09%), Postives = 88/193 (45.60%), Query Frame = 1 Query: 1 DGQGAL--------WWQQFHKGK---LKYTRPYLIEFMYTDNIQISSLTLLNSPSWNVHPVYSSN--ILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 540 DGQG + WW+ K LK P LI+ + N + +++L+NSP N H V+S TI P T+ NTDGI+P S N I I +GDD VA+K AY + I L +++GSE + G+ +V +D+K T +G+RIK+ G V + + M Sbjct: 146 DGQGGVKLQDKKVSWWELAADAKVKKLKQNTPRLIQINKSKNFTLYNVSLINSP--NFHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIATGDDNVAIK--------AYKGRAETRNISILHNDFGTGHGMSIGSE-TMGVYNVTVDDLKMNGTTNGLRIKSDKSAAGVVNGVRYSNVVM 327
BLAST of DR908206 vs. ExPASy Swiss-Prot
Match: PGLR_MEDSA (Polygalacturonase OS=Medicago sativa PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.728e-11 Identity = 54/194 (27.84%), Postives = 95/194 (48.97%), Query Frame = 1 Query: 1 DGQGALWWQQFH-----KGKLKYTRPYL-IEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATI-ALGS-EMSGGIQDVRAEDIKAINTESGVRIKTAVGRGG--YVKDIYVRGMTMHTMK 552 DGQGA +++ GK ++ ++ F + +N + +T +S +++V NI G TI AP SPNTDGI+ T+ +I + I +GDDCV++ G +KQ+ ++ + C + ++ +LG ++ + ++ T++GVRIKT G V DI+ +TM +K Sbjct: 121 DGQGATVYKKAAPASAWSGKNSNSKVFMNFGFNFVNNSIVRGVTSKDSKNFHVMVFGCKNITFDGFTITAPGDSPNTDGIHMGKSTDVKILNTNIGTGDDCVSIGDG-----------SKQITVQGVNCGPGHGLSVGSLGKFTTEENVEGITVKNCTLTATDNGVRIKTWPDAPGTITVSDIHFEDITMTNVK 303 The following BLAST results are available for this feature:
BLAST of DR908206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DR908206 ID=DR908206; Name=DR908206; organism=Citrus sinensis; type=EST; length=695bpback to top |