DR908199

Overview
NameDR908199
Unique NameDR908199
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length696
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908199 vs. ExPASy Swiss-Prot
Match: CHI4_SOLTU (Endochitinase 4 (Fragment) OS=Solanum tuberosum GN=CHTB4 PE=2 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 1.763e-61
Identity = 109/171 (63.74%), Postives = 128/171 (74.85%), Query Frame = 3
Query:    3 EIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPN--YPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCG 503
            EIAAFFAQT HETTGGWP AP G YAWGYCF+ E   P DYC P+  +PC    KY+GRGPIQ+S NYNY  C           NNPDL+ATDPV+SFKSAIWFWMT Q PKPSCH+VII  W+PSA D  A RLPG+G+ TNIINGG+ECG+G ++ V++RIGF+  +CG
Sbjct:  133 EIAAFFAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPGDYCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLL--NNPDLVATDPVISFKSAIWFWMTPQSPKPSCHDVIIGRWQPSAADRAANRLPGFGVITNIINGGLECGRGSDSRVQDRIGFYRRYCG 301          
BLAST of DR908199 vs. ExPASy Swiss-Prot
Match: CHIB_VITVI (Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE=2 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 2.303e-61
Identity = 110/198 (55.56%), Postives = 136/198 (68.69%), Query Frame = 3
Query:    3 EIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPN--YPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPYGLNLMAQSM 584
            EIAAF AQT HETTGGW  AP G YAWGYC++ E   P  YC P+  +PC    KYYGRGPIQ+S+NYNY +            NNPDL+ATD V+SFK+A WFWMT Q PKPSCH VI   W PS  D +AGRLPG+G+ TNIINGG+ECG+G    V++RIGF+  +C    +  G++LDC NQRP+G  L+  ++
Sbjct:  119 EIAAFLAQTSHETTGGWASAPDGPYAWGYCYLREQGSPGAYCVPSAQWPCAAGRKYYGRGPIQISYNYNYGQAGKAIGVDLV--NNPDLVATDAVISFKTAFWFWMTPQSPKPSCHNVITGGWTPSGADRSAGRLPGFGVITNIINGGVECGKGVVPQVQDRIGFYKRYCDILRVSYGNNLDCNNQRPFGSGLLLDTI 314          
BLAST of DR908199 vs. ExPASy Swiss-Prot
Match: CHI3_ORYSJ (Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht3 PE=2 SV=2)

HSP 1 Score: 234.187 bits (596), Expect = 5.130e-61
Identity = 109/190 (57.37%), Postives = 132/190 (69.47%), Query Frame = 3
Query:    3 EIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSD-YCDPN--YPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPY 557
            E+AAF AQT HETTGGWP AP G Y+WGYCF  E +  +  YC+P   +PC    KYYGRGPIQ+++NYNY              NNPDL+A+D  +SFK+A WFWMT Q PKPSCH VI  +W PSA+D  AGR+PGYG  TNIINGG+ECG G +  V +RIGF+  +C   G+  GD+LDCYNQRPY
Sbjct:  130 EVAAFLAQTSHETTGGWPTAPDGPYSWGYCFKEENNGNAPTYCEPKPEWPCAAGKKYYGRGPIQITYNYNY--GPAGQAIGSDLLNNPDLVASDATVSFKTAFWFWMTPQSPKPSCHAVITGQWTPSADDQAAGRVPGYGEITNIINGGVECGHGADDKVADRIGFYKRYCDMLGVSYGDNLDCYNQRPY 317          
BLAST of DR908199 vs. ExPASy Swiss-Prot
Match: CHIX_PEA (Endochitinase OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 6.701e-61
Identity = 110/188 (58.51%), Postives = 132/188 (70.21%), Query Frame = 3
Query:    3 EIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDP-NYPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPY 557
            E+AAF AQT HETTGGWP AP G YAWGYCF+SE +    YC P ++PC    KYYGRGPIQL+ NYNY              NNPDLL+T+P +SFK+AIWFWMT Q  KPS H+VI   W PSA D +AGR+PGYG+ TNIINGGIECG G +  V +R+GF+  +C  FG+ PG +LDC NQR +
Sbjct:  134 ELAAFLAQTSHETTGGWPTAPDGPYAWGYCFVSEQNTQEVYCSPKDWPCAPGKKYYGRGPIQLTHNYNY--GLAGQAIKEDLINNPDLLSTNPTVSFKTAIWFWMTPQANKPSSHDVITGRWTPSAADSSAGRVPGYGVITNIINGGIECGHGQDNRVDDRVGFYKRYCQIFGVDPGGNLDCNNQRSF 319          
BLAST of DR908199 vs. ExPASy Swiss-Prot
Match: CHID_SOLLC (Basic endochitinase (Fragment) OS=Solanum lycopersicum GN=CHI14 PE=2 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 2.546e-60
Identity = 107/190 (56.32%), Postives = 129/190 (67.89%), Query Frame = 3
Query:    3 EIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYC--DPNYPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPYG 560
            EIAAF AQT HETTGGW  AP G Y+WGYC+  E   P DYC     +PC    KY+GRGPIQ+S+NYNY              NNPDL+A D V+SFK+A+WFWMTAQ PKPS H+VI   W PS  D   GR+PG+G+ TNIINGG+EC  G NA + NRIGF+  +C   G+ PG++LDC NQRP+G
Sbjct:   59 EIAAFLAQTSHETTGGWATAPDGPYSWGYCYNREQGSPGDYCASSQQWPCAPGKKYFGRGPIQISYNYNYGAAGSAIGVNLL--NNPDLVANDAVVSFKTALWFWMTAQQPKPSAHDVITGRWSPSVADSAPGRVPGFGVITNIINGGMECNSGSNALMDNRIGFYRRYCQILGVDPGNNLDCANQRPFG 246          
BLAST of DR908199 vs. ExPASy Swiss-Prot
Match: CHIC_SECCE (Basic endochitinase C OS=Secale cereale GN=rscc PE=1 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 1.650e-59
Identity = 107/189 (56.61%), Postives = 130/189 (68.78%), Query Frame = 3
Query:    3 EIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPN--YPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPY 557
            ++AAF AQT HETTGGW  AP G +AWGYCF  E    +DYC P+  +PC    +YYGRGPIQLS NYNY               NPDL+ATDP +SFK+A+WFWMTAQ PKPS H VI  +W PS  D  AGR PG+G+ TNIINGG+ECG G ++ V +RIGF+  +C   G+  GD+LDCYNQRP+
Sbjct:   79 DVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGAAADYCTPSAQWPCAPGKRYYGRGPIQLSHNYNY--GPAGRAIGVDLLRNPDLVATDPTVSFKTALWFWMTAQAPKPSSHAVITGKWSPSGADRAAGRAPGFGVITNIINGGLECGHGQDSRVADRIGFYKRYCDILGVGYGDNLDCYNQRPF 265          
BLAST of DR908199 vs. ExPASy Swiss-Prot
Match: CHI2_HORVU (26 kDa endochitinase 2 OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 3.677e-59
Identity = 108/189 (57.14%), Postives = 130/189 (68.78%), Query Frame = 3
Query:    3 EIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPN--YPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPY 557
            E+AAF AQT HETTGGW  AP G +AWGYCF  E    SDYC P+  +PC    +YYGRGPIQLS NYNY               NPDL+ATD  + FK+AIWFWMTAQPPKPS H VI  +W PS  D  AGR+PG+G+ TNIINGGIECG G ++ V +RIGF+  +C   G+  G++LDCY+QRP+
Sbjct:   79 EVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGASSDYCTPSAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLA--NPDLVATDATVGFKTAIWFWMTAQPPKPSSHAVIAGQWSPSGADRAAGRVPGFGVITNIINGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDCYSQRPF 265          
BLAST of DR908199 vs. ExPASy Swiss-Prot
Match: CHI1_HORVU (26 kDa endochitinase 1 OS=Hordeum vulgare PE=2 SV=4)

HSP 1 Score: 227.639 bits (579), Expect = 4.802e-59
Identity = 108/189 (57.14%), Postives = 132/189 (69.84%), Query Frame = 3
Query:    3 EIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPN--YPCR-GK-YYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPY 557
            E+AAF AQT HETTGGW  AP G +AWGYCF  E    S+YC P+  +PC  GK YYGRGPIQLS NYNY               NPDL+ATDP +SFK+A+WFWMTAQ PKPS H VI  +W PS  D  AGR+PG+G+ TNI+NGGIECG G ++ V +RIGF+  +C   G+  G++LDCY+QRP+
Sbjct:  131 EVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGATSNYCTPSAQWPCAPGKSYYGRGPIQLSHNYNY--GPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWMTAQAPKPSSHAVITGQWSPSGTDRAAGRVPGFGVITNIVNGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDCYSQRPF 317          
BLAST of DR908199 vs. ExPASy Swiss-Prot
Match: CHIA_SECCE (Basic endochitinase A OS=Secale cereale GN=rsca PE=1 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.070e-58
Identity = 108/189 (57.14%), Postives = 131/189 (69.31%), Query Frame = 3
Query:    3 EIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPN--YPCR-GK-YYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPY 557
            E+AAF AQT HETTGGW  AP G +AWGYCF  E    S+YC P+  +PC  GK YYGRGPIQLS NYNY               NPDL+ATDP +SFK+A+WFWMTAQ PKPS H VI  +W PS  D  AGR+PG+G+ TNI+NGGIECG G ++ V +RIGF+  +C    +  G++LDCYNQRP+
Sbjct:  134 EVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGATSNYCTPSAQWPCAPGKSYYGRGPIQLSHNYNY--GPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWMTAQAPKPSSHAVITGQWSPSGTDRAAGRVPGFGVITNIVNGGIECGHGQDSRVADRIGFYKRYCDILRVGYGNNLDCYNQRPF 320          
BLAST of DR908199 vs. ExPASy Swiss-Prot
Match: CHI1_ORYSJ (Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht1 PE=2 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.070e-58
Identity = 105/191 (54.97%), Postives = 130/191 (68.06%), Query Frame = 3
Query:    3 EIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPP--SDYC--DPNYPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPY 557
            E+AAF AQT HETTGGW  AP G Y+WGYCF  E +    SDYC     +PC    KYYGRGPIQ+S+NYNY              +NPDL+A+D  +SFK+A WFWMT Q PKPSCH V+  +W P+ ND  AGR+PGYG+ TNIINGG+ECG G ++ V +RIGF+  +C   G+  G +LDCYNQRP+
Sbjct:  133 EVAAFLAQTSHETTGGWATAPDGPYSWGYCFKEENNGNVGSDYCVQSSQWPCAAGKKYYGRGPIQISYNYNY--GPAGQAIGSNLLSNPDLVASDATVSFKTAFWFWMTPQSPKPSCHAVMTGQWTPNGNDQAAGRVPGYGVVTNIINGGVECGHGADSRVADRIGFYKRYCDMLGVSYGANLDCYNQRPF 321          
The following BLAST results are available for this feature:
BLAST of DR908199 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
CHI4_SOLTU1.763e-6163.74Endochitinase 4 (Fragment) OS=Solanum tuberosum GN... [more]
CHIB_VITVI2.303e-6155.56Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE... [more]
CHI3_ORYSJ5.130e-6157.37Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHIX_PEA6.701e-6158.51Endochitinase OS=Pisum sativum PE=2 SV=1[more]
CHID_SOLLC2.546e-6056.32Basic endochitinase (Fragment) OS=Solanum lycopers... [more]
CHIC_SECCE1.650e-5956.61Basic endochitinase C OS=Secale cereale GN=rscc PE... [more]
CHI2_HORVU3.677e-5957.1426 kDa endochitinase 2 OS=Hordeum vulgare PE=1 SV=... [more]
CHI1_HORVU4.802e-5957.1426 kDa endochitinase 1 OS=Hordeum vulgare PE=2 SV=... [more]
CHIA_SECCE1.070e-5857.14Basic endochitinase A OS=Secale cereale GN=rsca PE... [more]
CHI1_ORYSJ1.070e-5854.97Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16327 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-20_A08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908199 ID=DR908199; Name=DR908199; organism=Citrus sinensis; type=EST; length=696bp
GAGAAATCGCTGCCTTTTTTGCCCAAACTGGCCATGAAACTACTGGGGGA
TGGCCCGATGCACCTGGTGGCGAATATGCTTGGGGATATTGCTTTATAAG
CGAAGTTAGCCCTCCGTCCGACTACTGTGATCCTAACTATCCATGTCGAG
GGAAGTACTATGGCCGAGGTCCAATTCAACTCTCTTGGAATTACAATTAC
TTACGGTGCGGAGAAGGCCTAGGGCTAGGAGAGGAGTTGTTGAACAATCC
AGACCTTCTTGCTACTGATCCAGTACTATCATTCAAGTCAGCAATCTGGT
TCTGGATGACTGCACAGCCACCAAAGCCATCGTGCCACGAAGTCATTATC
GACGAATGGAAACCATCAGCAAATGACGTAAACGCCGGCCGGCTTCCGGG
ATACGGTCTAACCACAAATATAATCAACGGTGGAATTGAATGTGGCCAAG
GTGGGAATGCCGCTGTACGTAACCGTATTGGGTTCTTTACCACTTTCTGT
GGCAAGTTTGGGATTCAGCCTGGTGACAGTCTTGATTGCTACAACCAACG
ACCTTATGGCCTTAATCTGATGGCACAATCTATGTGATCATCATGATCAA
CGTTTTAGTAAAATAAGCTTAATAAAAGCTACTTAATAAAAACTTTAGAT
GTCACACTTGTAGGTGGACAACTAAATTGTTAGTTTGTTACGCTCT
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