DR908188

Overview
NameDR908188
Unique NameDR908188
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length701
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908188 vs. ExPASy Swiss-Prot
Match: METK1_MOUSE (S-adenosylmethionine synthetase isoform type-1 OS=Mus musculus GN=Mat1a PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 5.782e-52
Identity = 105/191 (54.97%), Postives = 132/191 (69.11%), Query Frame = 3
Query:    3 QHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPL 575
            QH+E +T + +   LKE VIK V+P KYLDE T++HL PSGRFVIGGP GDAG+TGRKII+DTY             KD TKVDRS AY  R  AKS+V  GL RR +VQVSYAIGV EPLS+ + +YGT    ++E+L++V ++FD RPG++  +LDLK+     + KTA YGHFGR   +F WEV K L
Sbjct:  209 QHNEDITLEAMQEALKEQVIKAVVPAKYLDEDTVYHLQPSGRFVIGGPQGDAGVTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKAGLCRRVLVQVSYAIGVAEPLSISIFTYGTSNKTERELLEVVNKNFDLRPGVIVRDLDLKK---PIYQKTACYGHFGRS--EFPWEVPKKL 394          
BLAST of DR908188 vs. ExPASy Swiss-Prot
Match: METK_CARHZ (S-adenosylmethionine synthetase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=metK PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 9.862e-52
Identity = 101/186 (54.30%), Postives = 131/186 (70.43%), Query Frame = 3
Query:    3 QHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 560
            QH   V+ +EI  D+ EHV+KPVIPE  LDE T + +NP+GRFVIGGP GDAGLTGRKII+DTY             KDPTKVDRS AY  R  AK+IVA G+A +  +Q++YAIGV +P+S+ VD++GTGKI D++I++++K+ FD RP  +   LDL+R     + +TAAYGHFGR D D  WE
Sbjct:  200 QHHPDVSQEEIRKDIIEHVVKPVIPEHLLDENTRYFVNPTGRFVIGGPQGDAGLTGRKIIVDTYGGMARHGGGAFSGKDPTKVDRSAAYAARYVAKNIVAAGIADKIEIQLAYAIGVAKPVSIMVDTFGTGKIADEKIVELIKKHFDLRPAGIIRMLDLRR---PIYKQTAAYGHFGRTDIDLPWE 382          
BLAST of DR908188 vs. ExPASy Swiss-Prot
Match: METK1_HUMAN (S-adenosylmethionine synthetase isoform type-1 OS=Homo sapiens GN=MAT1A PE=1 SV=2)

HSP 1 Score: 203.371 bits (516), Expect = 9.862e-52
Identity = 104/191 (54.45%), Postives = 133/191 (69.63%), Query Frame = 3
Query:    3 QHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPL 575
            QH+E +T +E+   LKE VI+ V+P KYLDE T++HL PSGRFVIGGP GDAG+TGRKII+DTY             KD TKVDRS AY  R  AKS+V  GL RR +VQVSYAIGV EPLS+ + +YGT +  ++E+L +V ++FD RPG++  +LDLK+     + KTA YGHFGR   +F WEV + L
Sbjct:  208 QHNEDITLEEMRRALKEQVIRAVVPAKYLDEDTVYHLQPSGRFVIGGPQGDAGVTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKAGLCRRVLVQVSYAIGVAEPLSISIFTYGTSQKTERELLDVVHKNFDLRPGVIVRDLDLKK---PIYQKTACYGHFGRS--EFPWEVPRKL 393          
BLAST of DR908188 vs. ExPASy Swiss-Prot
Match: METK_BACHD (S-adenosylmethionine synthetase OS=Bacillus halodurans GN=metK PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.288e-51
Identity = 98/186 (52.69%), Postives = 134/186 (72.04%), Query Frame = 3
Query:    3 QHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 560
            QH   VT ++I +DLK+HVI+ V+PE+ +DE+T + +NP+GRFVIGGP GDAGLTGRKII+DTY             KDPTKVDRSGAY  R  AK+IVA GLA +C VQ++YAIGV +P+S+ +D++GTG++ +  ++++V+E FD RP  +   LDL+R     + +TAAYGHFGR D +  WE
Sbjct:  205 QHHPEVTLEQIESDLKQHVIRSVVPEELIDEETKYFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSGAYAARYVAKNIVAAGLADKCEVQLAYAIGVAKPVSISIDTFGTGQVSEARLVELVREHFDLRPAGIIKMLDLRR---PIYKQTAAYGHFGRTDVELPWE 387          
BLAST of DR908188 vs. ExPASy Swiss-Prot
Match: METK1_BOVIN (S-adenosylmethionine synthetase isoform type-1 OS=Bos taurus GN=MAT1A PE=2 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.288e-51
Identity = 104/191 (54.45%), Postives = 133/191 (69.63%), Query Frame = 3
Query:    3 QHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPL 575
            QH+E +T +++   LKE VI+ V+P +YLDE TI+HL PSGRFVIGGP GDAG+TGRKII+DTY             KD TKVDRS AY  R  AKS+V  GL RR +VQVSYAIGV EPLS+ + +YGT +  ++E+L +V ++FD RPG++  +LDLK+     + KTA YGHFGR   +F WEV K L
Sbjct:  209 QHNEDITLEDMRRALKEQVIRAVVPARYLDEDTIYHLQPSGRFVIGGPQGDAGVTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKAGLCRRVLVQVSYAIGVAEPLSISIFTYGTSQKTERELLDVVNKNFDLRPGVIVRDLDLKK---PIYQKTACYGHFGRS--EFPWEVPKKL 394          
BLAST of DR908188 vs. ExPASy Swiss-Prot
Match: METK_THEP3 (S-adenosylmethionine synthetase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=metK PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.197e-51
Identity = 100/186 (53.76%), Postives = 129/186 (69.35%), Query Frame = 3
Query:    3 QHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 560
            QH   + +D I  D+ EHVIKP+IPE  +D+KT   +NP+GRFVIGGP GD+GLTGRKII+DTY             KDPTKVDRS +Y  R  AK+IVA GLA++C VQ++YAIGV  PL + +D++GTGKI D++I +IVK+ FD RP  +  +LDL+R     + + AAYGHFGR D D  WE
Sbjct:  199 QHAPEIDHDTIERDIIEHVIKPIIPENMIDDKTKIFVNPTGRFVIGGPQGDSGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSASYAARYVAKNIVAAGLAKKCEVQLAYAIGVATPLEIGIDTFGTGKISDEKISEIVKQVFDLRPAAIIRDLDLRR---PIYRQVAAYGHFGRHDLDLPWE 381          
BLAST of DR908188 vs. ExPASy Swiss-Prot
Match: METK1_RAT (S-adenosylmethionine synthetase isoform type-1 OS=Rattus norvegicus GN=Mat1a PE=1 SV=2)

HSP 1 Score: 201.83 bits (512), Expect = 2.870e-51
Identity = 107/192 (55.73%), Postives = 133/192 (69.27%), Query Frame = 3
Query:    3 QHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDK-EILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPL 575
            QH+E +T + +   LKE VIK V+P KYLDE TI+HL PSGRFVIGGP GDAG+TGRKII+DTY             KD TKVDRS AY  R  AKS+V  GL RR +VQVSYAIGV EPLS+ + +YGT K  ++ E+L++V ++FD RPG++  +LDLK+     + KTA YGHFGR   +F WEV K L
Sbjct:  209 QHNEDITLEAMREALKEQVIKAVVPAKYLDEDTIYHLQPSGRFVIGGPQGDAGVTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKAGLCRRVLVQVSYAIGVAEPLSISIFTYGTSKKTERDELLEVVNKNFDLRPGVIVRDLDLKK---PIYQKTACYGHFGRS--EFPWEVPKKL 395          
BLAST of DR908188 vs. ExPASy Swiss-Prot
Match: METK_GEOKA (S-adenosylmethionine synthetase OS=Geobacillus kaustophilus GN=metK PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 3.748e-51
Identity = 101/198 (51.01%), Postives = 132/198 (66.67%), Query Frame = 3
Query:    3 QHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 596
            QH   +T ++I  D+KE VIKPV+P + LDE T + +NP+GRFVIGGP GDAGLTGRKII+DTY             KDPTKVDRS AY  R  AK+IVA GLA +C VQ++YAIGV  P+S+ +D++GTGK+ +  ++++V+ +FD RP  +   LDL+R     + +TAAYGHFGR D D  WE        K QA
Sbjct:  203 QHHPEITQEQIQRDIKEQVIKPVVPAELLDENTKYFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARYVAKNIVAAGLADKCEVQLAYAIGVARPVSISIDTFGTGKVSEDILIEVVRNNFDLRPAGIIKMLDLRR---PIYKQTAAYGHFGRTDIDLPWERTDKAALLKEQA 397          
BLAST of DR908188 vs. ExPASy Swiss-Prot
Match: METK_NEIMB (S-adenosylmethionine synthetase OS=Neisseria meningitidis serogroup B GN=metK PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 6.393e-51
Identity = 97/186 (52.15%), Postives = 132/186 (70.97%), Query Frame = 3
Query:    3 QHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 560
            QHD ++  +E+   + EH+IKPV+P + L ++T + +NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA GLA +C +QVSYAIGV EP S+ +D++GTGKI +++++ +V+E FD RP  +   LDL R     + K+AAYGHFGR++P+FTWE
Sbjct:  193 QHDPSIAYEELKNAVIEHIIKPVLPSELLTDETKYLINPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYACRYVAKNIVAAGLATQCQIQVSYAIGVAEPTSISIDTFGTGKISEEKLIALVREHFDLRPKGIVQMLDLLR---PIYSKSAAYGHFGREEPEFTWE 375          
BLAST of DR908188 vs. ExPASy Swiss-Prot
Match: METK_CHLSY (S-adenosylmethionine synthetase OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=metK PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 6.393e-51
Identity = 106/186 (56.99%), Postives = 127/186 (68.28%), Query Frame = 3
Query:    3 QHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 560
            QH   +T D+I ADL EHVIK  IPE +LD +T   +NP+GRFVIGGP GD+GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA GLARR  +QVSYAIGV  PLS+ V+++GT  +PD+ ILK V E FD RPG +  +LDL+R     + KTAA GHFGR D D  WE
Sbjct:  207 QHAPDITQDQIRADLIEHVIKTEIPEAWLDSQTKIFINPTGRFVIGGPMGDSGLTGRKIIVDTYGGVARHGGGAFSGKDPSKVDRSAAYACRWVAKNIVAAGLARRVELQVSYAIGVARPLSLSVETFGTAAVPDEVILKAVNEVFDLRPGAIIRDLDLRR---PIYRKTAAGGHFGRTDIDLPWE 389          
The following BLAST results are available for this feature:
BLAST of DR908188 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK1_MOUSE5.782e-5254.97S-adenosylmethionine synthetase isoform type-1 OS=... [more]
METK_CARHZ9.862e-5254.30S-adenosylmethionine synthetase OS=Carboxydothermu... [more]
METK1_HUMAN9.862e-5254.45S-adenosylmethionine synthetase isoform type-1 OS=... [more]
METK_BACHD1.288e-5152.69S-adenosylmethionine synthetase OS=Bacillus halodu... [more]
METK1_BOVIN1.288e-5154.45S-adenosylmethionine synthetase isoform type-1 OS=... [more]
METK_THEP32.197e-5153.76S-adenosylmethionine synthetase OS=Thermoanaerobac... [more]
METK1_RAT2.870e-5155.73S-adenosylmethionine synthetase isoform type-1 OS=... [more]
METK_GEOKA3.748e-5151.01S-adenosylmethionine synthetase OS=Geobacillus kau... [more]
METK_NEIMB6.393e-5152.15S-adenosylmethionine synthetase OS=Neisseria menin... [more]
METK_CHLSY6.393e-5156.99S-adenosylmethionine synthetase OS=Chloroflexus au... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16316 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-35_B02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908188 ID=DR908188; Name=DR908188; organism=Citrus sinensis; type=EST; length=701bp
CCCAGCATGATGAGACTGTCACAAATGATGAAATTGCTGCTGACCTTAAG
GAGCACGTCATTAAGCCTGTCATCCCCGAGAAGTACCTTGATGAGAAGAC
CATCTTCCACCTTAATCCATCAGGTCGTTTTGTCATTGGTGGGCCTCATG
GTGATGCTGGTCTCACTGGACGTAAGATCATCATCGACACTTATGGTGGC
TGGGGAGCCCATGGTGGCGGTGCTTTCTCTGGAAAAGACCCTACTAAGGT
GGATAGGAGTGGTGCATACATTGTTAGGCAGGCTGCTAAGAGCATTGTTG
CAAACGGGCTTGCTCGCAGGTGCATTGTCCAAGTCTCCTATGCCATTGGT
GTGCCTGAGCCATTGTCTGTTTTTGTGGACTCATATGGAACCGGCAAGAT
TCCTGACAAGGAGATCCTCAAAATTGTGAAGGAAAGCTTTGATTTCAGGC
CAGGAATGATGACCATCAATTTGGATCTCAAAAGGGGCGGTAATGGCAGG
TTCTTGAAGACTGCTGCCTATGGACACTTTGGCAGGGATGACCCAGACTT
CACTTGGGAAGTTGTGAAGCCCCTCAAGTGGGAAAAGCCTCAAGCTTAAA
TTTGAGTTGAAAAGTGAAAACTATCCCTGCTGTTCAAGTTTGCTTCTATT
GGTAGTGGATGAATAATTTGAATATTATCTTGCTGCTGCTTTGTAATACT
A
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