DR908188

Overview
NameDR908188
Unique NameDR908188
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length701
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908188 vs. ExPASy Swiss-Prot
Match: METK_STRSY (S-adenosylmethionine synthetase OS=Streptococcus suis (strain 05ZYH33) GN=metK PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 6.846e-45
Identity = 92/186 (49.46%), Postives = 122/186 (65.59%), Query Frame = 3
Query:    3 QHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 560
            QHD  V+ ++I  D+ E VIK +IP  YLD++T + +NP+GRFVIGGP GD+GLTGRKII+DTY             KD TKVDRS +Y  R  AK+IVA GLA++  VQ++YAIGV  P+SV +D++GT  + + ++   V+  FD RP  +   LDLKR     + +TAAYGH GR D D  WE
Sbjct:  201 QHDPEVSQEQIRQDVIERVIKEIIPAHYLDDQTNYFINPTGRFVIGGPQGDSGLTGRKIIVDTYGGYSRHGGGAFSGKDATKVDRSASYAARYIAKNIVAAGLAKKAEVQLAYAIGVAHPVSVRIDTFGTSTVAESKLEAAVRHIFDLRPAGIIQMLDLKR---PIYKQTAAYGHMGRTDIDLPWE 383          
BLAST of DR908188 vs. ExPASy Swiss-Prot
Match: METK_STRS2 (S-adenosylmethionine synthetase OS=Streptococcus suis (strain 98HAH33) GN=metK PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 6.846e-45
Identity = 92/186 (49.46%), Postives = 122/186 (65.59%), Query Frame = 3
Query:    3 QHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 560
            QHD  V+ ++I  D+ E VIK +IP  YLD++T + +NP+GRFVIGGP GD+GLTGRKII+DTY             KD TKVDRS +Y  R  AK+IVA GLA++  VQ++YAIGV  P+SV +D++GT  + + ++   V+  FD RP  +   LDLKR     + +TAAYGH GR D D  WE
Sbjct:  201 QHDPEVSQEQIRQDVIERVIKEIIPAHYLDDQTNYFINPTGRFVIGGPQGDSGLTGRKIIVDTYGGYSRHGGGAFSGKDATKVDRSASYAARYIAKNIVAAGLAKKAEVQLAYAIGVAHPVSVRIDTFGTSTVAESKLEAAVRHIFDLRPAGIIQMLDLKR---PIYKQTAAYGHMGRTDIDLPWE 383          
BLAST of DR908188 vs. ExPASy Swiss-Prot
Match: METK_STRM5 (S-adenosylmethionine synthetase OS=Stenotrophomonas maltophilia (strain R551-3) GN=metK PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 6.846e-45
Identity = 92/185 (49.73%), Postives = 123/185 (66.49%), Query Frame = 3
Query:    3 QHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTW 557
            QH   +   ++   ++E +IKPV+P K+L + T FH+NP+G+F IGGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK++VA GLA RC VQVSYAIGV EP S+ V ++GTGKI D +I K++++ FD RP  +   LDL    +  + +TAAYGHFGR   +F++
Sbjct:  191 QHAPGIKQKDLIEAVREEIIKPVLPAKWLHKGTKFHINPTGKFEIGGPVGDCGLTGRKIIVDTYGGWARHGGGAFSGKDPSKVDRSAAYAARYVAKNVVAAGLADRCEVQVSYAIGVAEPTSISVTTFGTGKISDDKIEKLIRKHFDLRPYGIIKMLDLV---HPMYQQTAAYGHFGRKPKEFSY 372          
BLAST of DR908188 vs. ExPASy Swiss-Prot
Match: METK_SHIBS (S-adenosylmethionine synthetase OS=Shigella boydii serotype 4 (strain Sb227) GN=metK PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 6.846e-45
Identity = 92/186 (49.46%), Postives = 121/186 (65.05%), Query Frame = 3
Query:    3 QHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 560
            QH E +    +   + E +IKP++P ++L   T F +NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GT K+P +++  +V+E FD RP  +   LDL    +  + +TAAYGHFGR+   F WE
Sbjct:  189 QHSEEIDQKSLQEAVMEEIIKPILPAEWLTSATTFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPSEQLTLLVREFFDLRPYGLIQMLDLL---HPIYKETAAYGHFGRE--HFPWE 369          
BLAST of DR908188 vs. ExPASy Swiss-Prot
Match: METK_SHIB3 (S-adenosylmethionine synthetase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=metK PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 6.846e-45
Identity = 92/186 (49.46%), Postives = 121/186 (65.05%), Query Frame = 3
Query:    3 QHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 560
            QH E +    +   + E +IKP++P ++L   T F +NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GT K+P +++  +V+E FD RP  +   LDL    +  + +TAAYGHFGR+   F WE
Sbjct:  189 QHSEEIDQKSLQEAVMEEIIKPILPAEWLTSATTFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPSEQLTLLVREFFDLRPYGLIQMLDLL---HPIYKETAAYGHFGRE--HFPWE 369          
BLAST of DR908188 vs. ExPASy Swiss-Prot
Match: METK_SHEPC (S-adenosylmethionine synthetase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=metK PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 6.846e-45
Identity = 91/186 (48.92%), Postives = 125/186 (67.20%), Query Frame = 3
Query:    3 QHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 560
            QH   +   ++   + E +IKPV+P ++L + T + +NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ ++++GTGK+ ++ ++K+V++ FD RP  +T  L+L R     +  TAAYGHFGR+  +F WE
Sbjct:  189 QHSPDIAQADLIEGVMETIIKPVLPAQWLSKDTKYFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCELQVSYAIGVAEPTSISIETFGTGKVSEEVLIKLVRQHFDLRPYGLTEMLNLAR---PIYQATAAYGHFGRN--EFPWE 369          
BLAST of DR908188 vs. ExPASy Swiss-Prot
Match: METK_RICTY (S-adenosylmethionine synthetase OS=Rickettsia typhi GN=metK PE=3 SV=2)

HSP 1 Score: 180.644 bits (457), Expect = 6.846e-45
Identity = 87/186 (46.77%), Postives = 121/186 (65.05%), Query Frame = 3
Query:    3 QHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 560
            QH   +   ++   + E +IKP +P   L + T + +NP+GRFVIGGP  D GLTGRKII+D+Y             KDPTK+DRS AY+ R  AK+IV +GLA RC +Q+SYAIGV  P+SV+ +++GT K+ +++  K++ E FD RPG +  NL L       + KTA+YGHFGR+D +FTWE
Sbjct:  189 QHHPEIQQKDLIEAVIEEIIKPTLPTHLLHKDTKYLINPTGRFVIGGPVADCGLTGRKIIVDSYGGMAKHGGGCFSGKDPTKIDRSAAYMARYIAKNIVGSGLADRCEIQISYAIGVASPVSVYAETFGTSKLSNEQTTKLITEHFDMRPGKIIKNLKLH---TQCYQKTASYGHFGREDENFTWE 371          
BLAST of DR908188 vs. ExPASy Swiss-Prot
Match: METK_PSEHT (S-adenosylmethionine synthetase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=metK PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 6.846e-45
Identity = 90/186 (48.39%), Postives = 124/186 (66.67%), Query Frame = 3
Query:    3 QHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 560
            QH E ++  ++   + E +IKPV+P + +   T F +NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA GLA +C +QVSYAIG+ EP S+ V+++GT K+ +  ++++++E FD RP  +   LDL+R     +L TAAYGHFGR+  +F WE
Sbjct:  189 QHSEDISQKDLIEAVMETIIKPVLPAELITSATKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADKCELQVSYAIGIAEPTSISVETFGTSKLEESRLIELIREHFDLRPYGLIKMLDLER---PIYLPTAAYGHFGRE--EFPWE 369          
BLAST of DR908188 vs. ExPASy Swiss-Prot
Match: METK_LACPL (S-adenosylmethionine synthetase OS=Lactobacillus plantarum GN=metK PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 6.846e-45
Identity = 93/186 (50.00%), Postives = 123/186 (66.13%), Query Frame = 3
Query:    3 QHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 560
            QHD  V  D I   + + VIK V+P   LD++T + +NP+GRFVIGGP GDAGLTGRK+I+DTY             KD TKVDRS +Y  R  AK++VA GLA +  VQ++YAIGV EP+S+ VD+ GTGK+ D+ ++  ++E+FD RP  +   LDL+R     + +TAAYGHFGR D D  WE
Sbjct:  200 QHDPDVDLDTIRQTVIDQVIKAVLPADLLDDQTKYLVNPTGRFVIGGPQGDAGLTGRKVIVDTYGGFAHHGGGAFSGKDATKVDRSASYAARYIAKNVVAAGLADQVEVQLAYAIGVAEPVSIAVDTAGTGKVSDEALINAIRENFDLRPAGIIKMLDLQR---PIYRQTAAYGHFGRTDIDLPWE 382          
BLAST of DR908188 vs. ExPASy Swiss-Prot
Match: METK_LACLS (S-adenosylmethionine synthetase OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=metK PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 6.846e-45
Identity = 93/186 (50.00%), Postives = 122/186 (65.59%), Query Frame = 3
Query:    3 QHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 560
            QH    TN+EI  D+   VIK +IP + LD++T + +NP+GRFVIGGP GD+GLTGRKII+DTY             KD TKVDRS +Y  R  AK+IVA GLA +  +Q+SYAIGV  P S+ V+++GTGK+ D E+L  +++ FD RP  +   LDL R   G   +TA+YGHFGR D +  WE
Sbjct:  203 QHAAAATNEEIHDDVINKVIKAIIPAELLDDETKYFINPTGRFVIGGPQGDSGLTGRKIIVDTYGGYAPHGGGAFSGKDATKVDRSASYAARYVAKNIVAAGLADKAQIQLSYAIGVATPTSINVETFGTGKVSDDELLAAIRKVFDLRPAGIIQMLDLLRPIYG---QTASYGHFGRTDIELPWE 385          
The following BLAST results are available for this feature:
BLAST of DR908188 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_STRSY6.846e-4549.46S-adenosylmethionine synthetase OS=Streptococcus s... [more]
METK_STRS26.846e-4549.46S-adenosylmethionine synthetase OS=Streptococcus s... [more]
METK_STRM56.846e-4549.73S-adenosylmethionine synthetase OS=Stenotrophomona... [more]
METK_SHIBS6.846e-4549.46S-adenosylmethionine synthetase OS=Shigella boydii... [more]
METK_SHIB36.846e-4549.46S-adenosylmethionine synthetase OS=Shigella boydii... [more]
METK_SHEPC6.846e-4548.92S-adenosylmethionine synthetase OS=Shewanella putr... [more]
METK_RICTY6.846e-4546.77S-adenosylmethionine synthetase OS=Rickettsia typh... [more]
METK_PSEHT6.846e-4548.39S-adenosylmethionine synthetase OS=Pseudoalteromon... [more]
METK_LACPL6.846e-4550.00S-adenosylmethionine synthetase OS=Lactobacillus p... [more]
METK_LACLS6.846e-4550.00S-adenosylmethionine synthetase OS=Lactococcus lac... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_16316 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-35_B02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908188 ID=DR908188; Name=DR908188; organism=Citrus sinensis; type=EST; length=701bp
CCCAGCATGATGAGACTGTCACAAATGATGAAATTGCTGCTGACCTTAAG
GAGCACGTCATTAAGCCTGTCATCCCCGAGAAGTACCTTGATGAGAAGAC
CATCTTCCACCTTAATCCATCAGGTCGTTTTGTCATTGGTGGGCCTCATG
GTGATGCTGGTCTCACTGGACGTAAGATCATCATCGACACTTATGGTGGC
TGGGGAGCCCATGGTGGCGGTGCTTTCTCTGGAAAAGACCCTACTAAGGT
GGATAGGAGTGGTGCATACATTGTTAGGCAGGCTGCTAAGAGCATTGTTG
CAAACGGGCTTGCTCGCAGGTGCATTGTCCAAGTCTCCTATGCCATTGGT
GTGCCTGAGCCATTGTCTGTTTTTGTGGACTCATATGGAACCGGCAAGAT
TCCTGACAAGGAGATCCTCAAAATTGTGAAGGAAAGCTTTGATTTCAGGC
CAGGAATGATGACCATCAATTTGGATCTCAAAAGGGGCGGTAATGGCAGG
TTCTTGAAGACTGCTGCCTATGGACACTTTGGCAGGGATGACCCAGACTT
CACTTGGGAAGTTGTGAAGCCCCTCAAGTGGGAAAAGCCTCAAGCTTAAA
TTTGAGTTGAAAAGTGAAAACTATCCCTGCTGTTCAAGTTTGCTTCTATT
GGTAGTGGATGAATAATTTGAATATTATCTTGCTGCTGCTTTGTAATACT
A
back to top