DR908188

Overview
NameDR908188
Unique NameDR908188
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length701
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DR908188 vs. ExPASy Swiss-Prot
Match: METK_ERWT9 (S-adenosylmethionine synthetase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=metK PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 6.846e-45
Identity = 93/186 (50.00%), Postives = 123/186 (66.13%), Query Frame = 3 
Query:    3 QHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 560
            QH E ++  E+   + E +IKPV+P ++++  T +H+NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GT KI  + +  +V+E FD RP  +   LDL    +  + +TAAYGHFGR+   F WE
Sbjct:  189 QHAEDISQKELQEAVMEEIIKPVLPTEWINASTKYHINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKISTETLTLLVREFFDLRPHGLIQMLDLL---HPIYRETAAYGHFGRE--HFPWE 369
[Close]
BLAST of DR908188 vs. ExPASy Swiss-Prot
Match: METK_DESPS (S-adenosylmethionine synthetase OS=Desulfotalea psychrophila GN=metK PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 6.846e-45
Identity = 89/186 (47.85%), Postives = 123/186 (66.13%), Query Frame = 3 
Query:    3 QHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 560
            QHDE+++ +++   + E +IKP +P   +D  T F +NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK++VA G+A    +QV+YAIG+ +P+S+ V+S+GTG+I D  I +++  +FD RP  +   LDL R     + +TAAYGHFGR D +F WE
Sbjct:  202 QHDESISYNDLKEAVMEEIIKPTLPADMIDANTKFFINPTGRFVIGGPVGDCGLTGRKIIVDTYGGKALHGGGAFSGKDPSKVDRSSAYYGRYVAKNLVAAGIASELQIQVAYAIGIAQPVSINVNSFGTGRISDAAIKELILGNFDLRPKAIVQQLDLLR---PIYRQTAAYGHFGRSDVEFPWE 384
[Close]
BLAST of DR908188 vs. ExPASy Swiss-Prot
Match: METK_BURVG (S-adenosylmethionine synthetase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=metK PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 6.846e-45
Identity = 94/186 (50.54%), Postives = 120/186 (64.52%), Query Frame = 3 
Query:    3 QHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 560
            QH   +    +   + E +IKP +P   +     F +NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA GLA R ++QVSYAIGV EP SV V+++GTG++ D  I K+V+E FD RP  +   LDL R     + KTAAYGHFGR++P+F+WE
Sbjct:  192 QHAPDIELPALREAVIEEIIKPTLPADLIKGDIKFLVNPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFGTGRVSDAVITKLVREHFDLRPKGIIKMLDLLR---PIYEKTAAYGHFGREEPEFSWE 374
[Close]
BLAST of DR908188 vs. ExPASy Swiss-Prot
Match: METK_BURS3 (S-adenosylmethionine synthetase OS=Burkholderia sp. (strain 383) GN=metK PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 6.846e-45
Identity = 94/186 (50.54%), Postives = 120/186 (64.52%), Query Frame = 3 
Query:    3 QHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 560
            QH   +    +   + E +IKP +P   +     F +NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA GLA R ++QVSYAIGV EP SV V+++GTG++ D  I K+V+E FD RP  +   LDL R     + KTAAYGHFGR++P+F+WE
Sbjct:  192 QHAPDIELPALREAVIEEIIKPTLPADLIKGDIKFLVNPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFGTGRVSDAVITKLVREHFDLRPKGIIKMLDLLR---PIYEKTAAYGHFGREEPEFSWE 374
[Close]
BLAST of DR908188 vs. ExPASy Swiss-Prot
Match: METK_BURCM (S-adenosylmethionine synthetase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=metK PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 6.846e-45
Identity = 94/186 (50.54%), Postives = 120/186 (64.52%), Query Frame = 3 
Query:    3 QHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 560
            QH   +    +   + E +IKP +P   +     F +NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA GLA R ++QVSYAIGV EP SV V+++GTG++ D  I K+V+E FD RP  +   LDL R     + KTAAYGHFGR++P+F+WE
Sbjct:  192 QHAPDIELPALREAVIEEIIKPTLPADLIKGDIKFLVNPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFGTGRVSDAVITKLVREHFDLRPKGIIKMLDLLR---PIYEKTAAYGHFGREEPEFSWE 374
[Close]
BLAST of DR908188 vs. ExPASy Swiss-Prot
Match: METK_BURCJ (S-adenosylmethionine synthetase OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=metK PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 6.846e-45
Identity = 94/186 (50.54%), Postives = 120/186 (64.52%), Query Frame = 3 
Query:    3 QHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 560
            QH   +    +   + E +IKP +P   +     F +NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA GLA R ++QVSYAIGV EP SV V+++GTG++ D  I K+V+E FD RP  +   LDL R     + KTAAYGHFGR++P+F+WE
Sbjct:  192 QHAPDIELPALREAVIEEIIKPTLPADLIKGDIKFLVNPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFGTGRVSDAVITKLVREHFDLRPKGIIKMLDLLR---PIYEKTAAYGHFGREEPEFSWE 374
[Close]
BLAST of DR908188 vs. ExPASy Swiss-Prot
Match: METK_BURA4 (S-adenosylmethionine synthetase OS=Burkholderia ambifaria (strain MC40-6) GN=metK PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 6.846e-45
Identity = 94/186 (50.54%), Postives = 120/186 (64.52%), Query Frame = 3 
Query:    3 QHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 560
            QH   +    +   + E +IKP +P   +     F +NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA GLA R ++QVSYAIGV EP SV V+++GTG++ D  I K+V+E FD RP  +   LDL R     + KTAAYGHFGR++P+F+WE
Sbjct:  192 QHAPDIELPALREAVIEEIIKPTLPADLIKGDIKFLVNPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFGTGRVSDAVITKLVREHFDLRPKGIIKMLDLLR---PIYEKTAAYGHFGREEPEFSWE 374
[Close]
BLAST of DR908188 vs. ExPASy Swiss-Prot
Match: METK_VEREI (S-adenosylmethionine synthetase OS=Verminephrobacter eiseniae (strain EF01-2) GN=metK PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 8.941e-45
Identity = 91/170 (53.53%), Postives = 119/170 (70.00%), Query Frame = 3 
Query:   51 EHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 560
            E +I+PV+P+++L + T F +NP+GRFV GGP GD GLTGRKII+DTY             KDPTKVDRS AY  R  AK++VA GLAR+C +QV+YAIGV EP+++ V + GTG I D+ I  ++K+ FD RP  +   LDL R     + KTAAYGHFGR++P+FTWE
Sbjct:  214 EEIIRPVLPKEWLHD-TRFLINPTGRFVTGGPQGDCGLTGRKIIVDTYGGACPHGGGAFSGKDPTKVDRSAAYAARHVAKNVVAAGLARQCQIQVAYAIGVAEPMNITVYTEGTGVIADERIAALIKQHFDLRPRGIIQMLDLLR---PIYEKTAAYGHFGREEPEFTWE 379
[Close]
BLAST of DR908188 vs. ExPASy Swiss-Prot
Match: METK_SYNJB (S-adenosylmethionine synthetase OS=Synechococcus sp. GN=metK PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 8.941e-45
Identity = 95/190 (50.00%), Postives = 121/190 (63.68%), Query Frame = 3 
Query:    9 DETVTNDEIAADLKEHVIKPVIPEKYL--DEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLK---RGGNGRFLK-TAAYGHFGRDDPDFTWE 560
            +E    + I ADL E V+ PV  E  +  D  T F  NP+G+FVIGGP GDAGLTGRKII+DTY             KDPTKVDRS AY  R  AK+IVA GLA++C VQVSYAIGV  P+++ V+++GTG+IPD+E+L++V+  FD RP  +     L+   R   GRF +  A YGHFG+   D  WE
Sbjct:  204 EEAAVQERIRADLWEAVVTPVFAELPIKPDSHTRFLTNPTGKFVIGGPQGDAGLTGRKIIVDTYGGYSRHGGGAFSGKDPTKVDRSAAYAARYVAKNIVAAGLAQKCEVQVSYAIGVARPINILVETFGTGRIPDEELLRLVQRHFDLRPAAILAQFQLRELPRQRGGRFYQNVAVYGHFGQTHLDLPWE 393
[Close]
BLAST of DR908188 vs. ExPASy Swiss-Prot
Match: METK_STRMK (S-adenosylmethionine synthetase OS=Stenotrophomonas maltophilia (strain K279a) GN=metK PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 8.941e-45
Identity = 92/185 (49.73%), Postives = 123/185 (66.49%), Query Frame = 3 
Query:    3 QHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTW 557
            QH   +   ++   ++E +IKPV+P K+L + T FH+NP+G+F IGGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK++VA GLA RC VQVSYAIGV EP S+ V ++GTGKI D +I K++++ FD RP  +   LDL    +  + +TAAYGHFGR   +F++
Sbjct:  191 QHAPGIKQKDLIEAVREEIIKPVLPAKWLHKGTKFHINPTGKFEIGGPVGDCGLTGRKIIVDTYGGWARHGGGAFSGKDPSKVDRSAAYAARYVAKNVVAAGLADRCEVQVSYAIGVAEPTSISVTTFGTGKISDDKIEKLIRKHFDLRPYGIIKMLDLI---HPMYQQTAAYGHFGRKPKEFSY 372
The following BLAST results are available for this feature:
BLAST of DR908188 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_ERWT96.846e-4550.00S-adenosylmethionine synthetase OS=Erwinia tasmani... [more]
METK_DESPS6.846e-4547.85S-adenosylmethionine synthetase OS=Desulfotalea ps... [more]
METK_BURVG6.846e-4550.54S-adenosylmethionine synthetase OS=Burkholderia vi... [more]
METK_BURS36.846e-4550.54S-adenosylmethionine synthetase OS=Burkholderia sp... [more]
METK_BURCM6.846e-4550.54S-adenosylmethionine synthetase OS=Burkholderia am... [more]
METK_BURCJ6.846e-4550.54S-adenosylmethionine synthetase OS=Burkholderia ce... [more]
METK_BURA46.846e-4550.54S-adenosylmethionine synthetase OS=Burkholderia am... [more]
METK_VEREI8.941e-4553.53S-adenosylmethionine synthetase OS=Verminephrobact... [more]
METK_SYNJB8.941e-4550.00S-adenosylmethionine synthetase OS=Synechococcus s... [more]
METK_STRMK8.941e-4549.73S-adenosylmethionine synthetase OS=Stenotrophomona... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16316 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-35_B02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908188 ID=DR908188; Name=DR908188; organism=Citrus sinensis; type=EST; length=701bp
CCCAGCATGATGAGACTGTCACAAATGATGAAATTGCTGCTGACCTTAAG
GAGCACGTCATTAAGCCTGTCATCCCCGAGAAGTACCTTGATGAGAAGAC
CATCTTCCACCTTAATCCATCAGGTCGTTTTGTCATTGGTGGGCCTCATG
GTGATGCTGGTCTCACTGGACGTAAGATCATCATCGACACTTATGGTGGC
TGGGGAGCCCATGGTGGCGGTGCTTTCTCTGGAAAAGACCCTACTAAGGT
GGATAGGAGTGGTGCATACATTGTTAGGCAGGCTGCTAAGAGCATTGTTG
CAAACGGGCTTGCTCGCAGGTGCATTGTCCAAGTCTCCTATGCCATTGGT
GTGCCTGAGCCATTGTCTGTTTTTGTGGACTCATATGGAACCGGCAAGAT
TCCTGACAAGGAGATCCTCAAAATTGTGAAGGAAAGCTTTGATTTCAGGC
CAGGAATGATGACCATCAATTTGGATCTCAAAAGGGGCGGTAATGGCAGG
TTCTTGAAGACTGCTGCCTATGGACACTTTGGCAGGGATGACCCAGACTT
CACTTGGGAAGTTGTGAAGCCCCTCAAGTGGGAAAAGCCTCAAGCTTAAA
TTTGAGTTGAAAAGTGAAAACTATCCCTGCTGTTCAAGTTTGCTTCTATT
GGTAGTGGATGAATAATTTGAATATTATCTTGCTGCTGCTTTGTAATACT
A
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