DR908188

Overview
NameDR908188
Unique NameDR908188
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length701
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908188 vs. ExPASy Swiss-Prot
Match: METK2_YEAST (S-adenosylmethionine synthetase 2 OS=Saccharomyces cerevisiae GN=SAM2 PE=1 SV=3)

HSP 1 Score: 178.718 bits (452), Expect = 2.601e-44
Identity = 92/193 (47.67%), Postives = 127/193 (65.80%), Query Frame = 3
Query:    3 QHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKW 581
            QH + ++  ++   L++ +++ VIP+  LDE T + + PSGRFVIGGP GDAGLTGRKII+D Y             KD +KVDRS AY  R  AKS+VA GL +R  VQ SYAIG+ EPLS+ VD+YGT    D EI++I+K++FD RPG++   LDL R     +L TA+YGHF   + +++WE  K L++
Sbjct:  197 QHADEISTADLRTQLQKDIVEKVIPKDMLDENTKYFIQPSGRFVIGGPQGDAGLTGRKIIVDAYGGASSVGGGAFSGKDYSKVDRSAAYAARWVAKSLVAAGLCKRVQVQFSYAIGIAEPLSLHVDTYGTATKSDDEIIEIIKKNFDLRPGVLVKELDLAR---PIYLPTASYGHF--TNQEYSWEKPKKLEF 384          
BLAST of DR908188 vs. ExPASy Swiss-Prot
Match: METK_SODGM (S-adenosylmethionine synthetase OS=Sodalis glossinidius (strain morsitans) GN=metK PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.398e-44
Identity = 92/186 (49.46%), Postives = 121/186 (65.05%), Query Frame = 3
Query:    3 QHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 560
            QH E +   ++   + E +IKPV+P ++L  +T + +NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ ++++GT KIP   +  +V+E FD RP  +   LDL +     + +TAAYGHFGR+   F WE
Sbjct:  189 QHAEDIALPQLKEAVMEEIIKPVLPAEWLSAQTKYFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLAERCEIQVSYAIGVAEPTSITIETFGTEKIPADNLTALVREFFDLRPHGLITMLDLLQ---PIYRETAAYGHFGRE--HFPWE 369          
BLAST of DR908188 vs. ExPASy Swiss-Prot
Match: METK_PSEPF (S-adenosylmethionine synthetase OS=Pseudomonas fluorescens (strain Pf0-1) GN=metK PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.398e-44
Identity = 93/196 (47.45%), Postives = 127/196 (64.80%), Query Frame = 3
Query:    3 QHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDD----------PDFTWE 560
            QH+  V+ +++   + E ++K V+P + L + T FH+NP+G+F+IGGP GD GLTGRKII+D+Y             KDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV +P S+ ++++GTGKI D +I+K+V+E FD RP  +T  LDL    +  + +TAAYGHFGR              FTWE
Sbjct:  190 QHNPEVSYNDLREGVMELIVKHVLPAELLSKDTQFHINPTGQFIIGGPVGDCGLTGRKIIVDSYGGMARHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLAERCEIQVSYAIGVAQPTSISLNTFGTGKISDDKIIKLVREVFDLRPYAITTMLDLL---HPMYQETAAYGHFGRAPQTKTVGEDTFSTFTWE 382          
BLAST of DR908188 vs. ExPASy Swiss-Prot
Match: METK_PSEFS (S-adenosylmethionine synthetase OS=Pseudomonas fluorescens (strain SBW25) GN=metK PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.398e-44
Identity = 95/196 (48.47%), Postives = 128/196 (65.31%), Query Frame = 3
Query:    3 QHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGR--------DD--PDFTWE 560
            QH+  V+  ++   + E ++K V+P + L + T FH+NP+G+F+IGGP GD GLTGRKII+D+Y             KDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV +P S+ ++++GTGKI D +I+K+V+E FD RP  +T  LDL    +  + +TAAYGHFGR        DD    FTWE
Sbjct:  190 QHNPDVSYADLREGVMELIVKHVLPAELLSKDTQFHINPTGQFIIGGPVGDCGLTGRKIIVDSYGGMARHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLAERCEIQVSYAIGVAQPTSISLNTFGTGKISDDKIVKLVREIFDLRPYAITTMLDLL---HPMYQETAAYGHFGRTPAQKTVGDDTFTTFTWE 382          
BLAST of DR908188 vs. ExPASy Swiss-Prot
Match: METK_PASMU (S-adenosylmethionine synthetase OS=Pasteurella multocida GN=metK PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.398e-44
Identity = 90/188 (47.87%), Postives = 128/188 (68.09%), Query Frame = 3
Query:    3 QHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVV 566
            QH ++++  ++   + E +IKPV+P ++L ++T + +NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA GLA RC +Q+SYAIGV +P S+ V+++GTGK+ ++ ++ +V+E FD RP  +   LDL +     + +TAAYGHFGR+   F WE V
Sbjct:  189 QHCDSISQHDLHEAVMEEIIKPVLPAEWLSKETKYFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGAARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQLSYAIGVADPTSIMVETFGTGKVANELLVALVREFFDLRPYGLIKMLDLIQ---PIYRETAAYGHFGRE--QFPWEKV 371          
BLAST of DR908188 vs. ExPASy Swiss-Prot
Match: METK_SYNE7 (S-adenosylmethionine synthetase OS=Synechococcus elongatus (strain PCC 7942) GN=metK PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 4.437e-44
Identity = 94/190 (49.47%), Postives = 124/190 (65.26%), Query Frame = 3
Query:    9 DETVTNDEIAADLKEHVIKPVIPEKYL--DEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKR---GGNGRFL-KTAAYGHFGRDDPDFTWE 560
            D+    + I +DL E V+ PV  +  +  D  T F +NP+G+FVIGGP GDAGLTGRKII+DTY             KDPTKVDRS AY  R  AK+IVA GLA +C VQ+SYAIGV  P+SV V+++GTGK+ D+ +L +V++ F+ RP  +  + +L+R      GRF  + AAYGHFGR+D D  WE
Sbjct:  210 DDNAVQERIKSDLWEQVVLPVFSDLVIQPDSATRFLVNPTGKFVIGGPQGDAGLTGRKIIVDTYGGYSRHGGGAFSGKDPTKVDRSAAYACRYVAKNIVAAGLAEKCEVQLSYAIGVARPVSVLVETFGTGKVADEVLLDLVRKHFELRPAGIIEHFNLQRLPGERGGRFYQEVAAYGHFGRNDLDLPWE 399          
BLAST of DR908188 vs. ExPASy Swiss-Prot
Match: METK_SALAR (S-adenosylmethionine synthetase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=metK PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 4.437e-44
Identity = 91/186 (48.92%), Postives = 122/186 (65.59%), Query Frame = 3
Query:    3 QHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 560
            QH E +    +   + E +IKP++P ++L+  T F +NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GT K+  +++  +V+E FD RP  +   LDL    +  + +TAAYGHFGR+  +F WE
Sbjct:  189 QHAEDIDQKSLQEAVMEEIIKPILPSEWLNTSTKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVSSEQLTLLVREFFDLRPYGLIQMLDLL---HPIYKETAAYGHFGRE--NFPWE 369          
BLAST of DR908188 vs. ExPASy Swiss-Prot
Match: METK_PSEU2 (S-adenosylmethionine synthetase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=metK PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 4.437e-44
Identity = 95/196 (48.47%), Postives = 126/196 (64.29%), Query Frame = 3
Query:    3 QHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGR--------DD--PDFTWE 560
            QH+  V+  ++   + E ++K VIP   L + T FH+NP+G F+IGGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV +P S+ ++++GTGK+ D +I+K+V+++FD RP  +T  LDL    +  +  TAAYGHFGR        DD    FTWE
Sbjct:  190 QHNPDVSYKDLREGVMELIVKHVIPAHLLHKDTQFHINPTGNFIIGGPVGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLAERCEIQVSYAIGVAQPTSISLNTFGTGKLSDDKIIKLVRDNFDLRPYAITTMLDLL---HPMYQATAAYGHFGRIPVEMTVGDDTFTAFTWE 382          
BLAST of DR908188 vs. ExPASy Swiss-Prot
Match: METK_PSEAE (S-adenosylmethionine synthetase OS=Pseudomonas aeruginosa GN=metK PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 4.437e-44
Identity = 93/197 (47.21%), Postives = 128/197 (64.97%), Query Frame = 3
Query:    3 QHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFT--WEVVKPLKWEK 587
            QH+  V+ +++   + E +IK V+P + L + T FH+NP+G FVIGGP GD GLTGRKII+D+Y             KDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV +P S+ ++++GTGK+ D++I+++V+E FD RP  +T  LDL    +  +  TAAYGHFGR   + T   +      WEK
Sbjct:  190 QHNPEVSYNDLRDGVMELIIKQVLPAELLHKDTQFHINPTGNFVIGGPVGDCGLTGRKIIVDSYGGMARHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLAERCEIQVSYAIGVAQPTSISINTFGTGKVSDEKIVQLVREHFDLRPYAITKMLDLL---HPMYQPTAAYGHFGRHPFELTVDGDTFTAFTWEK 383          
BLAST of DR908188 vs. ExPASy Swiss-Prot
Match: METK_PSEAB (S-adenosylmethionine synthetase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=metK PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 4.437e-44
Identity = 93/197 (47.21%), Postives = 128/197 (64.97%), Query Frame = 3
Query:    3 QHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFT--WEVVKPLKWEK 587
            QH+  V+ +++   + E +IK V+P + L + T FH+NP+G FVIGGP GD GLTGRKII+D+Y             KDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV +P S+ ++++GTGK+ D++I+++V+E FD RP  +T  LDL    +  +  TAAYGHFGR   + T   +      WEK
Sbjct:  190 QHNPEVSYNDLRDGVMELIIKQVLPAELLHKDTQFHINPTGNFVIGGPVGDCGLTGRKIIVDSYGGMARHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLAERCEIQVSYAIGVAQPTSISINTFGTGKVSDEKIVQLVREHFDLRPYAITKMLDLL---HPMYQPTAAYGHFGRHPFELTVDGDTFTAFTWEK 383          
The following BLAST results are available for this feature:
BLAST of DR908188 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK2_YEAST2.601e-4447.67S-adenosylmethionine synthetase 2 OS=Saccharomyces... [more]
METK_SODGM3.398e-4449.46S-adenosylmethionine synthetase OS=Sodalis glossin... [more]
METK_PSEPF3.398e-4447.45S-adenosylmethionine synthetase OS=Pseudomonas flu... [more]
METK_PSEFS3.398e-4448.47S-adenosylmethionine synthetase OS=Pseudomonas flu... [more]
METK_PASMU3.398e-4447.87S-adenosylmethionine synthetase OS=Pasteurella mul... [more]
METK_SYNE74.437e-4449.47S-adenosylmethionine synthetase OS=Synechococcus e... [more]
METK_SALAR4.437e-4448.92S-adenosylmethionine synthetase OS=Salmonella ariz... [more]
METK_PSEU24.437e-4448.47S-adenosylmethionine synthetase OS=Pseudomonas syr... [more]
METK_PSEAE4.437e-4447.21S-adenosylmethionine synthetase OS=Pseudomonas aer... [more]
METK_PSEAB4.437e-4447.21S-adenosylmethionine synthetase OS=Pseudomonas aer... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16316 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-35_B02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908188 ID=DR908188; Name=DR908188; organism=Citrus sinensis; type=EST; length=701bp
CCCAGCATGATGAGACTGTCACAAATGATGAAATTGCTGCTGACCTTAAG
GAGCACGTCATTAAGCCTGTCATCCCCGAGAAGTACCTTGATGAGAAGAC
CATCTTCCACCTTAATCCATCAGGTCGTTTTGTCATTGGTGGGCCTCATG
GTGATGCTGGTCTCACTGGACGTAAGATCATCATCGACACTTATGGTGGC
TGGGGAGCCCATGGTGGCGGTGCTTTCTCTGGAAAAGACCCTACTAAGGT
GGATAGGAGTGGTGCATACATTGTTAGGCAGGCTGCTAAGAGCATTGTTG
CAAACGGGCTTGCTCGCAGGTGCATTGTCCAAGTCTCCTATGCCATTGGT
GTGCCTGAGCCATTGTCTGTTTTTGTGGACTCATATGGAACCGGCAAGAT
TCCTGACAAGGAGATCCTCAAAATTGTGAAGGAAAGCTTTGATTTCAGGC
CAGGAATGATGACCATCAATTTGGATCTCAAAAGGGGCGGTAATGGCAGG
TTCTTGAAGACTGCTGCCTATGGACACTTTGGCAGGGATGACCCAGACTT
CACTTGGGAAGTTGTGAAGCCCCTCAAGTGGGAAAAGCCTCAAGCTTAAA
TTTGAGTTGAAAAGTGAAAACTATCCCTGCTGTTCAAGTTTGCTTCTATT
GGTAGTGGATGAATAATTTGAATATTATCTTGCTGCTGCTTTGTAATACT
A
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