DR908188

Overview
NameDR908188
Unique NameDR908188
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length701
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908188 vs. ExPASy Swiss-Prot
Match: METK1_TOBAC (S-adenosylmethionine synthetase 1 OS=Nicotiana tabacum GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 317.39 bits (812), Expect = 4.686e-86
Identity = 155/192 (80.73%), Postives = 167/192 (86.98%), Query Frame = 3
Query:    3 QHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK 578
            QHDETVTND+IA DLKEHVIKPVIP +YLDE TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKS+VA+GLARRCIVQVSYAIGV EPLSVFVD+Y TG IPDK+IL ++KE+FDFRPGMM+INLDL RGGN R+ KTAAYGHFGRDDPDF+WE VK LK
Sbjct:  196 QHDETVTNDQIAQDLKEHVIKPVIPSQYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVASGLARRCIVQVSYAIGVAEPLSVFVDTYKTGTIPDKDILTLIKENFDFRPGMMSINLDLLRGGNFRYQKTAAYGHFGRDDPDFSWETVKVLK 387          
BLAST of DR908188 vs. ExPASy Swiss-Prot
Match: METK1_PETHY (S-adenosylmethionine synthetase 1 OS=Petunia hybrida GN=SAM1 PE=2 SV=1)

HSP 1 Score: 317.005 bits (811), Expect = 6.120e-86
Identity = 157/198 (79.29%), Postives = 169/198 (85.35%), Query Frame = 3
Query:    3 QHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 596
            QHDETVTND+IA DLKEHVIKPV+P +YLDE TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKS+VA+GLARRCIVQVSYAIGV EPLSVFVD+Y TG IPDK+IL ++KE+FDFRPGMM+INLDL RGGN R+ KTAAYGHFGRDDPDFTWE VK L    PQA
Sbjct:  196 QHDETVTNDQIAQDLKEHVIKPVVPAEYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVASGLARRCIVQVSYAIGVAEPLSVFVDTYKTGTIPDKDILTLIKENFDFRPGMMSINLDLLRGGNFRYQKTAAYGHFGRDDPDFTWETVKVL---NPQA 390          
BLAST of DR908188 vs. ExPASy Swiss-Prot
Match: METK2_ACTCH (S-adenosylmethionine synthetase 2 OS=Actinidia chinensis GN=SAM2 PE=2 SV=1)

HSP 1 Score: 314.694 bits (805), Expect = 3.038e-85
Identity = 152/192 (79.17%), Postives = 167/192 (86.98%), Query Frame = 3
Query:    3 QHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK 578
            QHDETVTN++IA DLKEHVIKPVIP +Y+D+ TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAY+VRQAAKS+VA+GLARRCIVQVSYAIGVPEPLSVFVD+Y TGKIPDK+IL ++KE+FDFRPGM+ INLDLKRGGN R+ KTAAYGHFGRDD D TWE VK LK
Sbjct:  196 QHDETVTNEQIAKDLKEHVIKPVIPAQYMDDDTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYVVRQAAKSVVASGLARRCIVQVSYAIGVPEPLSVFVDTYKTGKIPDKDILALIKENFDFRPGMIAINLDLKRGGNFRYQKTAAYGHFGRDDADLTWETVKILK 387          
BLAST of DR908188 vs. ExPASy Swiss-Prot
Match: METK2_PETHY (S-adenosylmethionine synthetase 2 OS=Petunia hybrida GN=SAM2 PE=2 SV=1)

HSP 1 Score: 313.923 bits (803), Expect = 5.181e-85
Identity = 155/198 (78.28%), Postives = 168/198 (84.85%), Query Frame = 3
Query:    3 QHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 596
            QHDETVTND+IA DLKEHVIKPV+P +YLDE TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKS+VA+GLARRCIVQVSYAIGV EPLSVFVD+Y TG IP K++L ++KE+FDFRPGMM+INLDL RGGN R+ KTAAYGHFGRDDPDFTWE VK L    PQA
Sbjct:  196 QHDETVTNDQIAQDLKEHVIKPVVPAEYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVASGLARRCIVQVSYAIGVAEPLSVFVDTYKTGTIPGKDVLTLIKENFDFRPGMMSINLDLLRGGNFRYQKTAAYGHFGRDDPDFTWETVKVL---NPQA 390          
BLAST of DR908188 vs. ExPASy Swiss-Prot
Match: METK1_ACTCH (S-adenosylmethionine synthetase 1 OS=Actinidia chinensis GN=SAM1 PE=2 SV=1)

HSP 1 Score: 313.538 bits (802), Expect = 6.767e-85
Identity = 152/192 (79.17%), Postives = 167/192 (86.98%), Query Frame = 3
Query:    3 QHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK 578
            QHDETVTND+IA DLK+HVIKPV+P +YLD+ TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKS+VA+GLARRC+VQVSYAIGV EPLSVFVD+Y TGKI DK+IL ++KE+FDFRPGM+ INLDLKRGGN R+ KTAAYGHFGRDDPDFTWE VK LK
Sbjct:  196 QHDETVTNDQIANDLKKHVIKPVVPAQYLDDNTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVASGLARRCLVQVSYAIGVAEPLSVFVDTYKTGKIADKDILALIKENFDFRPGMIAINLDLKRGGNLRYQKTAAYGHFGRDDPDFTWETVKILK 387          
BLAST of DR908188 vs. ExPASy Swiss-Prot
Match: METK3_CATRO (S-adenosylmethionine synthetase 3 OS=Catharanthus roseus GN=SAMS3 PE=1 SV=1)

HSP 1 Score: 311.227 bits (796), Expect = 3.358e-84
Identity = 151/192 (78.65%), Postives = 167/192 (86.98%), Query Frame = 3
Query:    3 QHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK 578
            QHDETVTN++IA DLKEHVIKPVIP +YLD++TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKS+VA+GLARRC+VQVSYAIGV EPLSVFVD++ TGKIPDK+IL ++KE+FDFRPGM+ INLDLKRGGN R+ KTAA GH GRDDPDFTWE VK LK
Sbjct:  196 QHDETVTNEQIAQDLKEHVIKPVIPAQYLDDQTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVASGLARRCLVQVSYAIGVAEPLSVFVDTFKTGKIPDKDILALIKENFDFRPGMIAINLDLKRGGNFRYQKTAALGHLGRDDPDFTWETVKILK 387          
BLAST of DR908188 vs. ExPASy Swiss-Prot
Match: METK2_TOBAC (S-adenosylmethionine synthetase 2 OS=Nicotiana tabacum GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 308.531 bits (789), Expect = 2.177e-83
Identity = 152/192 (79.17%), Postives = 163/192 (84.90%), Query Frame = 3
Query:    3 QHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK 578
            QHDE VTN++IA DLKEHVIKPVIP KYLDE TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKS+VA GLARRCIVQVSYAIGV EPLSVFVD+Y TG IPDK+IL ++KE+FDFRPGM+ INLDL RGGN R+ KTAAYGHFGRD+ DFTWE VK LK
Sbjct:  196 QHDEGVTNEQIAQDLKEHVIKPVIPAKYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGEGAFSGKDPTKVDRSGAYIVRQAAKSVVAAGLARRCIVQVSYAIGVAEPLSVFVDTYKTGTIPDKDILALIKENFDFRPGMIAINLDLLRGGNFRYQKTAAYGHFGRDEADFTWETVKALK 387          
BLAST of DR908188 vs. ExPASy Swiss-Prot
Match: METK_CHLRE (S-adenosylmethionine synthetase OS=Chlamydomonas reinhardtii GN=METM PE=3 SV=1)

HSP 1 Score: 295.819 bits (756), Expect = 1.460e-79
Identity = 141/192 (73.44%), Postives = 161/192 (83.85%), Query Frame = 3
Query:    3 QHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK 578
            QH+  VTN++I  DL EHVIKPV+P KYLD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYI RQAAKS+VA+GLA+RC+VQVSY+I V EPLSVFVD+YGTG +PD EILK++++ FDFRPG++  NLDLKRGGN R+ KTAAYGHFGRDDPDFTWE VK L+
Sbjct:  199 QHNPDVTNEKIREDLMEHVIKPVVPAKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIARQAAKSVVASGLAKRCLVQVSYSIAVAEPLSVFVDTYGTGTMPDAEILKLIRKHFDFRPGLIGKNLDLKRGGNKRYQKTAAYGHFGRDDPDFTWETVKKLE 390          
BLAST of DR908188 vs. ExPASy Swiss-Prot
Match: METK2_PEA (S-adenosylmethionine synthetase 2 OS=Pisum sativum GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 1.297e-77
Identity = 144/176 (81.82%), Postives = 153/176 (86.93%), Query Frame = 3
Query:    3 QHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHF 530
            QHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF  GGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVR+AAKSIVANGLARRC+VQVSYAIGVPEPLSVFVDSYGTGKIPD+EIL IVKE+FDFRPGM++I+LDL RGGNGRF + +    F
Sbjct:  198 QHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFRHGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVREAAKSIVANGLARRCLVQVSYAIGVPEPLSVFVDSYGTGKIPDREILNIVKEAFDFRPGMISISLDLLRGGNGRFFEDSCIWTF 373          

HSP 2 Score: 23.0978 bits (48), Expect = 1.297e-77
Identity = 6/9 (66.67%), Postives = 7/9 (77.78%), Query Frame = 2
Query:  506 EDCCLWTLW 532
            ED C+WT W
Sbjct:  366 EDSCIWTFW 374          
BLAST of DR908188 vs. ExPASy Swiss-Prot
Match: METK_OSTLU (S-adenosylmethionine synthetase OS=Ostreococcus lucimarinus (strain CCE9901) GN=METK-1 PE=3 SV=1)

HSP 1 Score: 271.166 bits (692), Expect = 3.851e-72
Identity = 140/193 (72.54%), Postives = 150/193 (77.72%), Query Frame = 3
Query:    3 QHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDD--PDFTWEVVKPL 575
            QH E VTN++IA DL   VIK V+PEKYLD  TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYI RQAAKS+VA GLARRC+ Q+SYAIGV EPLSV VD+YGTGKIPD EIL  VK +FDFRPGMM   LDLKRGGN R+  TAAYGHFGRD+    FTWE V PL
Sbjct:  195 QHIEGVTNEKIAEDLMNEVIKKVVPEKYLDADTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYISRQAAKSVVAAGLARRCLFQISYAIGVAEPLSVHVDTYGTGKIPDSEILAKVKAAFDFRPGMMGKALDLKRGGNKRYQTTAAYGHFGRDEDLDIFTWEKVVPL 387          
The following BLAST results are available for this feature:
BLAST of DR908188 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK1_TOBAC4.686e-8680.73S-adenosylmethionine synthetase 1 OS=Nicotiana tab... [more]
METK1_PETHY6.120e-8679.29S-adenosylmethionine synthetase 1 OS=Petunia hybri... [more]
METK2_ACTCH3.038e-8579.17S-adenosylmethionine synthetase 2 OS=Actinidia chi... [more]
METK2_PETHY5.181e-8578.28S-adenosylmethionine synthetase 2 OS=Petunia hybri... [more]
METK1_ACTCH6.767e-8579.17S-adenosylmethionine synthetase 1 OS=Actinidia chi... [more]
METK3_CATRO3.358e-8478.65S-adenosylmethionine synthetase 3 OS=Catharanthus ... [more]
METK2_TOBAC2.177e-8379.17S-adenosylmethionine synthetase 2 OS=Nicotiana tab... [more]
METK_CHLRE1.460e-7973.44S-adenosylmethionine synthetase OS=Chlamydomonas r... [more]
METK2_PEA1.297e-7781.82S-adenosylmethionine synthetase 2 OS=Pisum sativum... [more]
METK_OSTLU3.851e-7272.54S-adenosylmethionine synthetase OS=Ostreococcus lu... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16316 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-35_B02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908188 ID=DR908188; Name=DR908188; organism=Citrus sinensis; type=EST; length=701bp
CCCAGCATGATGAGACTGTCACAAATGATGAAATTGCTGCTGACCTTAAG
GAGCACGTCATTAAGCCTGTCATCCCCGAGAAGTACCTTGATGAGAAGAC
CATCTTCCACCTTAATCCATCAGGTCGTTTTGTCATTGGTGGGCCTCATG
GTGATGCTGGTCTCACTGGACGTAAGATCATCATCGACACTTATGGTGGC
TGGGGAGCCCATGGTGGCGGTGCTTTCTCTGGAAAAGACCCTACTAAGGT
GGATAGGAGTGGTGCATACATTGTTAGGCAGGCTGCTAAGAGCATTGTTG
CAAACGGGCTTGCTCGCAGGTGCATTGTCCAAGTCTCCTATGCCATTGGT
GTGCCTGAGCCATTGTCTGTTTTTGTGGACTCATATGGAACCGGCAAGAT
TCCTGACAAGGAGATCCTCAAAATTGTGAAGGAAAGCTTTGATTTCAGGC
CAGGAATGATGACCATCAATTTGGATCTCAAAAGGGGCGGTAATGGCAGG
TTCTTGAAGACTGCTGCCTATGGACACTTTGGCAGGGATGACCCAGACTT
CACTTGGGAAGTTGTGAAGCCCCTCAAGTGGGAAAAGCCTCAAGCTTAAA
TTTGAGTTGAAAAGTGAAAACTATCCCTGCTGTTCAAGTTTGCTTCTATT
GGTAGTGGATGAATAATTTGAATATTATCTTGCTGCTGCTTTGTAATACT
A
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