DR908188

Overview
NameDR908188
Unique NameDR908188
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length701
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908188 vs. ExPASy Swiss-Prot
Match: METK_CALS8 (S-adenosylmethionine synthetase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=metK PE=3 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.054e-53
Identity = 106/186 (56.99%), Postives = 131/186 (70.43%), Query Frame = 3
Query:    3 QHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 560
            QH   VT+ +I AD+ EHVIKP+IPE  LD+ T  ++NP+GRFVIGGP GD+GLTGRKII+DTY             KDPTKVDRS  Y  R  AK+IVA GLA++C VQ+SYAIGV  PLS+ VD++GTGKI D++I +IVK  FD RP  +  +LDL+R     + K AAYGHFGR+D D  WE
Sbjct:  199 QHSPEVTHAQIEADVIEHVIKPIIPEGMLDKNTKIYINPTGRFVIGGPQGDSGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSATYAARYVAKNIVAAGLAKKCEVQLSYAIGVARPLSIRVDTFGTGKIDDEKIAEIVKRVFDLRPAAIIRDLDLRR---PIYKKVAAYGHFGREDLDLPWE 381          
BLAST of DR908188 vs. ExPASy Swiss-Prot
Match: METK_LEIIN (S-adenosylmethionine synthetase OS=Leishmania infantum GN=METK PE=2 SV=2)

HSP 1 Score: 208.764 bits (530), Expect = 2.347e-53
Identity = 111/195 (56.92%), Postives = 135/195 (69.23%), Query Frame = 3
Query:    3 QHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDP----DFTWEVVKPL 575
            QHDE VTND+I+ DL E VIK VIP   LD +T + LNPSGRFV GGPHGDAGLTGRKII+DTY             KDP+KVDRS AY  R  AKSIVA GLARRC+VQ++YAIGV EPLS+ V++YGTGK  D ++L+IVK++F  RP  +   L+L+R     +  T+ +GHFGR D      FTWEV K +
Sbjct:  199 QHDEHVTNDKISVDLMEKVIKAVIPANMLDAETKYWLNPSGRFVRGGPHGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDPSKVDRSAAYAARWIAKSIVAGGLARRCLVQLAYAIGVAEPLSMHVETYGTGKYDDAKLLEIVKQNFKLRPYDIIQELNLRR---PIYYDTSRFGHFGRKDELGTGGFTWEVPKKM 390          
BLAST of DR908188 vs. ExPASy Swiss-Prot
Match: METK_CLOD6 (S-adenosylmethionine synthetase OS=Clostridium difficile (strain 630) GN=metK PE=3 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 3.066e-53
Identity = 101/186 (54.30%), Postives = 133/186 (71.51%), Query Frame = 3
Query:    3 QHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 560
            QH ETV+ND+I  DL  HVIK VIP + LDE+T  ++NP+GRFVIGGP GD GLTGRKIIIDTY             KDPTKVDRS AY  R  AK+IVA GLA +C ++++YAIG+  PLS+F+D++GTGK+ +++++++V + FD RPG +  +LDL++     + K AAYGHFGR D D  WE
Sbjct:  200 QHCETVSNDKIREDLINHVIKEVIPAELLDEETKIYINPTGRFVIGGPQGDTGLTGRKIIIDTYGGYSRHGGGAFSGKDPTKVDRSAAYAARYVAKNIVAAGLADKCEIELAYAIGIARPLSIFIDTFGTGKVSEEKLVELVNKHFDLRPGAIIRDLDLRK---PLYKKVAAYGHFGRTDIDLPWE 382          
BLAST of DR908188 vs. ExPASy Swiss-Prot
Match: METK_ANATD (S-adenosylmethionine synthetase OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=metK PE=3 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 4.004e-53
Identity = 106/186 (56.99%), Postives = 131/186 (70.43%), Query Frame = 3
Query:    3 QHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 560
            QH   VT+ +I AD+ EHVIKPVIPE  LD+ T   +NP+GRFVIGGP GD+GLTGRKII+DTY             KDPTKVDRS  Y  R  AK+IVA+GLA++C VQVSYAIGV  PLS+ VD++GTGKI D++I +IVK  FD RP  +  +L+L+R     + + AAYGHFGR+D D  WE
Sbjct:  199 QHSPEVTHAQIEADVIEHVIKPVIPEGMLDKNTKIFINPTGRFVIGGPQGDSGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSATYAARYVAKNIVASGLAKKCEVQVSYAIGVARPLSIRVDTFGTGKISDEKIAEIVKRVFDLRPAAIIRDLNLRR---PIYKQVAAYGHFGREDLDLPWE 381          
BLAST of DR908188 vs. ExPASy Swiss-Prot
Match: METK_CLOPS (S-adenosylmethionine synthetase OS=Clostridium perfringens (strain SM101 / Type A) GN=metK PE=3 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 6.830e-53
Identity = 104/186 (55.91%), Postives = 132/186 (70.97%), Query Frame = 3
Query:    3 QHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 560
            QH   V+ ++I ADL EHVIK VIP + LDE T +++NP+GRFVIGGP GDAGLTGRKII+DTY             KDPTKVDRS AY  R  AK++VA G+A +  VQV+YAIGV +P+S+ VD++GTGKI D+EI+ I+ + FD RPG +  +LDL+R     + +TAAYGHFGR D D  WE
Sbjct:  197 QHGPEVSQEQIQADLMEHVIKAVIPAELLDENTKYYINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYGRHGGGAFSGKDPTKVDRSAAYAARWVAKNLVAAGIADKLEVQVAYAIGVAKPVSIIVDTFGTGKISDEEIVNIINKVFDLRPGAIIRDLDLRR---PIYRQTAAYGHFGRTDLDLPWE 379          
BLAST of DR908188 vs. ExPASy Swiss-Prot
Match: METK_CLOP1 (S-adenosylmethionine synthetase OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=metK PE=3 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 6.830e-53
Identity = 104/186 (55.91%), Postives = 132/186 (70.97%), Query Frame = 3
Query:    3 QHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 560
            QH   V+ ++I ADL EHVIK VIP + LDE T +++NP+GRFVIGGP GDAGLTGRKII+DTY             KDPTKVDRS AY  R  AK++VA G+A +  VQV+YAIGV +P+S+ VD++GTGKI D+EI+ I+ + FD RPG +  +LDL+R     + +TAAYGHFGR D D  WE
Sbjct:  197 QHGPEVSQEQIQADLMEHVIKAVIPAELLDENTKYYINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYGRHGGGAFSGKDPTKVDRSAAYAARWVAKNLVAAGIADKLEVQVAYAIGVAKPVSIIVDTFGTGKISDEEIVNIINKVFDLRPGAIIRDLDLRR---PIYRQTAAYGHFGRTDLDLPWE 379          
BLAST of DR908188 vs. ExPASy Swiss-Prot
Match: METK_CLOCE (S-adenosylmethionine synthetase OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=metK PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.165e-52
Identity = 101/186 (54.30%), Postives = 133/186 (71.51%), Query Frame = 3
Query:    3 QHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 560
            QH   V++D I  D+ EHVI PVIP + LDE T + +NP+GRFV+GGP GD+GLTGRKII+DTY             KDPTKVDRS AY  R  AK+IVA+G+AR+C VQ++YAIGV +P+SV VD++GT  IP+++I ++V + FD RP  +   L+L+R     + KTAAYGHFGRDD +F+WE
Sbjct:  200 QHGADVSHDTIEKDIMEHVIIPVIPRELLDEGTKYFINPTGRFVVGGPQGDSGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARYVAKNIVASGIARKCEVQLAYAIGVAKPVSVLVDTFGTAVIPEEKISELVNKHFDLRPAAIINKLNLRR---PIYRKTAAYGHFGRDDAEFSWE 382          
BLAST of DR908188 vs. ExPASy Swiss-Prot
Match: METK_STACT (S-adenosylmethionine synthetase OS=Staphylococcus carnosus (strain TM300) GN=metK PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.522e-52
Identity = 101/188 (53.72%), Postives = 133/188 (70.74%), Query Frame = 3
Query:    3 QHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVV 566
            QH E VT D+I  D+++HVI P++P   LD++T F +NP+GRFVIGGP GDAGLTGRKII+DTY             KDPTKVDRS AY  R  AK+IVA GLA +C VQ++YAIGV EP+S+ +D++GTGK+P+ ++++ V+++FD RP  +   LDLKR     + +TAAYGHFGR D    WE V
Sbjct:  202 QHAEDVTLDQIQEDIRKHVIDPIVPASLLDDETKFFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGFARHGGGCFSGKDPTKVDRSAAYAARYVAKNIVAAGLADKCEVQLAYAIGVAEPVSISIDTFGTGKVPESKLVEAVRDNFDLRPAGIIKMLDLKR---PIYKQTAAYGHFGRTDVALPWERV 386          
BLAST of DR908188 vs. ExPASy Swiss-Prot
Match: METK_GEOSW (S-adenosylmethionine synthetase OS=Geobacillus sp. (strain WCH70) GN=metK PE=3 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 2.595e-52
Identity = 100/198 (50.51%), Postives = 135/198 (68.18%), Query Frame = 3
Query:    3 QHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 596
            QH   +T ++I  D+KEHVIKP++P + +DE T + +NP+GRFVIGGP GDAGLTGRKII+DTY             KDPTKVDRS AY  R  AK+IVA+GLA +C VQ++YAIGV  P+S+ +D++GTGK+ +  ++++V+ +FD RP  +   LDL+R     + +TAAYGHFGR D D  WE     +  K QA
Sbjct:  203 QHHPEITQEQIERDIKEHVIKPIVPAELIDENTKYFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARYVAKNIVASGLADKCEVQLAYAIGVARPVSISIDTFGTGKVSEDILIEVVRNNFDLRPAGIIKMLDLRR---PIYKQTAAYGHFGRTDIDLPWERTDKAETLKEQA 397          
BLAST of DR908188 vs. ExPASy Swiss-Prot
Match: METK_GEOTN (S-adenosylmethionine synthetase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=metK PE=3 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 5.782e-52
Identity = 98/186 (52.69%), Postives = 130/186 (69.89%), Query Frame = 3
Query:    3 QHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 560
            QH   + +D+I  D+KEHVIKP++P + LDE T + +NP+GRFVIGGP GDAGLTGRKII+DTY             KDPTKVDRS AY  R  AK+IVA GLA +C VQ++YAIGV  P+S+ +D++GTGK+ +  ++++V+ +FD RP  +   LDL+R     + +TAAYGHFGR D D  WE
Sbjct:  203 QHHPEIEHDQIERDMKEHVIKPIVPAELLDENTKYFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARYVAKNIVAAGLADKCEVQLAYAIGVARPVSISIDTFGTGKVSEDVLIEVVRNNFDLRPAGIIKMLDLRR---PIYKQTAAYGHFGRTDVDLPWE 385          
The following BLAST results are available for this feature:
BLAST of DR908188 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_CALS81.054e-5356.99S-adenosylmethionine synthetase OS=Caldicellulosir... [more]
METK_LEIIN2.347e-5356.92S-adenosylmethionine synthetase OS=Leishmania infa... [more]
METK_CLOD63.066e-5354.30S-adenosylmethionine synthetase OS=Clostridium dif... [more]
METK_ANATD4.004e-5356.99S-adenosylmethionine synthetase OS=Anaerocellum th... [more]
METK_CLOPS6.830e-5355.91S-adenosylmethionine synthetase OS=Clostridium per... [more]
METK_CLOP16.830e-5355.91S-adenosylmethionine synthetase OS=Clostridium per... [more]
METK_CLOCE1.165e-5254.30S-adenosylmethionine synthetase OS=Clostridium cel... [more]
METK_STACT1.522e-5253.72S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_GEOSW2.595e-5250.51S-adenosylmethionine synthetase OS=Geobacillus sp.... [more]
METK_GEOTN5.782e-5252.69S-adenosylmethionine synthetase OS=Geobacillus the... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16316 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-35_B02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908188 ID=DR908188; Name=DR908188; organism=Citrus sinensis; type=EST; length=701bp
CCCAGCATGATGAGACTGTCACAAATGATGAAATTGCTGCTGACCTTAAG
GAGCACGTCATTAAGCCTGTCATCCCCGAGAAGTACCTTGATGAGAAGAC
CATCTTCCACCTTAATCCATCAGGTCGTTTTGTCATTGGTGGGCCTCATG
GTGATGCTGGTCTCACTGGACGTAAGATCATCATCGACACTTATGGTGGC
TGGGGAGCCCATGGTGGCGGTGCTTTCTCTGGAAAAGACCCTACTAAGGT
GGATAGGAGTGGTGCATACATTGTTAGGCAGGCTGCTAAGAGCATTGTTG
CAAACGGGCTTGCTCGCAGGTGCATTGTCCAAGTCTCCTATGCCATTGGT
GTGCCTGAGCCATTGTCTGTTTTTGTGGACTCATATGGAACCGGCAAGAT
TCCTGACAAGGAGATCCTCAAAATTGTGAAGGAAAGCTTTGATTTCAGGC
CAGGAATGATGACCATCAATTTGGATCTCAAAAGGGGCGGTAATGGCAGG
TTCTTGAAGACTGCTGCCTATGGACACTTTGGCAGGGATGACCCAGACTT
CACTTGGGAAGTTGTGAAGCCCCTCAAGTGGGAAAAGCCTCAAGCTTAAA
TTTGAGTTGAAAAGTGAAAACTATCCCTGCTGTTCAAGTTTGCTTCTATT
GGTAGTGGATGAATAATTTGAATATTATCTTGCTGCTGCTTTGTAATACT
A
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