DR908175

Overview
NameDR908175
Unique NameDR908175
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length703
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908175 vs. ExPASy Swiss-Prot
Match: 1433G_SHEEP (14-3-3 protein gamma (Fragments) OS=Ovis aries GN=YWHAG PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.970e-27
Identity = 63/104 (60.58%), Postives = 75/104 (72.12%), Query Frame = 2
Query:    5 TGDERKDVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGG 316
            TG++R  V + S KAY  A   ++  + PTHPIRLGLALN+SVFYYEI             AFD+AI+ELDTL+E+SYKDSTLIMQLLRDNLTLWTSD  +D G
Sbjct:   66 TGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIT------------AFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDDDG 157          
BLAST of DR908175 vs. ExPASy Swiss-Prot
Match: 1433X_MAIZE (14-3-3-like protein (Fragment) OS=Zea mays PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.161e-22
Identity = 51/59 (86.44%), Postives = 55/59 (93.22%), Query Frame = 2
Query:  146 IMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDE 322
            I+NSP+RAC+LAKQAFDEAISELD+L EESYKDSTLIMQLL DNLTLWTSD  EDGGDE
Sbjct:    1 ILNSPDRACNLAKQAFDEAISELDSLGEESYKDSTLIMQLLXDNLTLWTSDTNEDGGDE 59          
BLAST of DR908175 vs. ExPASy Swiss-Prot
Match: 14338_ORYSJ (Putative 14-3-3-like protein GF14-H OS=Oryza sativa subsp. japonica GN=GF14H PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.658e-14
Identity = 49/112 (43.75%), Postives = 66/112 (58.93%), Query Frame = 2
Query:    5 TGDERKDVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQKMDI 340
            TG E+K   D S+ AYQA                   A  FS+   EIMNSPERA  +AKQA DEA +E+++   E YKDS L+MQLL++NL LWTS++   GG+ ++  D+
Sbjct:  135 TGTEKKAATDQSLMAYQAWPC----------------AQLFSLL--EIMNSPERASQVAKQALDEATAEINSAGVEGYKDSMLMMQLLKENLALWTSEL--TGGETSKDDDV 226          
The following BLAST results are available for this feature:
BLAST of DR908175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
1433G_SHEEP4.970e-2760.5814-3-3 protein gamma (Fragments) OS=Ovis aries GN=... [more]
1433X_MAIZE2.161e-2286.4414-3-3-like protein (Fragment) OS=Zea mays PE=3 SV... [more]
14338_ORYSJ1.658e-1443.75Putative 14-3-3-like protein GF14-H OS=Oryza sativ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16303 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-32_D08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908175 ID=DR908175; Name=DR908175; organism=Citrus sinensis; type=EST; length=703bp
TAAGACTGGTGATGAGAGGAAAGATGTTGCTGATCTGTCAATGAAAGCCT
ATCAGGCAGCTTCTACTACCGCAGAAGCTGAATTGTCTCCTACCCACCCC
ATCCGACTTGGTTTGGCCTTGAACTTCTCAGTTTTTTACTATGAGATTAT
GAACTCTCCTGAAAGGGCATGCCACCTTGCAAAGCAGGCCTTTGATGAAG
CCATCTCAGAATTGGATACATTAAGTGAGGAATCTTACAAAGACAGCACG
TTGATAATGCAGCTATTGAGGGACAACCTCACTCTTTGGACTTCTGACAT
ACCAGAGGATGGAGGTGATGAAGCCCAGAAAATGGACATCTCTGCTAAAG
ATGGTGAAGGTGAAGATTGAAGAAGCAGAGGTGGGTTTGTTTTCCTATTT
TGGAGCACAGTTGCAATCTTTGTTGTTTTCTGTCCTCAGTGAACCAGCCA
GGAGCTTGGGAGCTCTAGCATATGATAGCAAGGAAGCTGCAATACCTTTA
TGACTCCCGGTGTTTTTCTTAGTTTACAAGAGACACTCAAGTACTGTTAT
TGTGCTGTTCCTATAATGTGGGTGTTATCTTCACTGTCAAGAGTTTCATG
ATTGGACTGCTTGTATCATTTGCATCCCAGAATCTTTTATATCTGCTGCC
GCTGATCAATTTGGACTTGGTGTTAAGACCACTTTGCACTTTAAAAAAAA
AAA
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