DR908175

Overview
NameDR908175
Unique NameDR908175
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length703
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908175 vs. ExPASy Swiss-Prot
Match: 143G2_ONCMY (14-3-3 protein gamma-2 OS=Oncorhynchus mykiss PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.629e-36
Identity = 73/109 (66.97%), Postives = 88/109 (80.73%), Query Frame = 2
Query:    5 TGDERKDVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQK 331
            TG++R  V + S KAY  A   ++  + PTHPIRLGLALN+SVFYYEI N+PE+ACHLAK AFD+AI+ELDTL+E+SY+DSTLIMQLLRDNLTLWTSD  +D G E  K
Sbjct:  139 TGEKRATVIESSEKAYNEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYQDSTLIMQLLRDNLTLWTSDQQDDEGGEGNK 247          
BLAST of DR908175 vs. ExPASy Swiss-Prot
Match: 1433B_SOYBN (14-3-3-like protein B (Fragment) OS=Glycine max GN=GF14B PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.629e-36
Identity = 73/102 (71.57%), Postives = 86/102 (84.31%), Query Frame = 2
Query:    2 KTGDERKDVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPE 307
            K GDERK   + +M +Y+AA   A A+L PTHPIRLGLALNFSVFYYEI+N  ++AC +AKQAF+EAI+ELDTL EESYKDSTLIMQLLRDNLTLWTSD+ +
Sbjct:  141 KVGDERKTATEDTMLSYKAAQDIASADLPPTHPIRLGLALNFSVFYYEILNQSDKACAMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDVQD 242          
BLAST of DR908175 vs. ExPASy Swiss-Prot
Match: 1433_XENLA (14-3-3-like protein (Fragment) OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.434e-36
Identity = 75/111 (67.57%), Postives = 91/111 (81.98%), Query Frame = 2
Query:    5 TGDERKDVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQKMD 337
            +GD +++    S +AYQ A   +++E+ PTHPIRLGLALNFSVFYYEI+NSPE+AC LAK AFDEAI ELDTL+EESYKDSTLIMQLLRDNLTLWTS   E+ G+EA  ++
Sbjct:  125 SGDSKQETVASSQQAYQEAFEISKSEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKSAFDEAIRELDTLNEESYKDSTLIMQLLRDNLTLWTS---ENQGEEADNVE 232          
BLAST of DR908175 vs. ExPASy Swiss-Prot
Match: 1433B_RAT (14-3-3 protein beta/alpha OS=Rattus norvegicus GN=Ywhab PE=1 SV=3)

HSP 1 Score: 151.754 bits (382), Expect = 3.434e-36
Identity = 74/108 (68.52%), Postives = 87/108 (80.56%), Query Frame = 2
Query:    5 TGDERKDVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQ 328
            +GD ++     S +AYQ A   ++ E+ PTHPIRLGLALNFSVFYYEI+NSPE+AC LAK AFDEAI+ELDTL+EESYKDSTLIMQLLRDNLTLWTS+   D GD  +
Sbjct:  136 SGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGDAGE 243          
BLAST of DR908175 vs. ExPASy Swiss-Prot
Match: 1433B_PONAB (14-3-3 protein beta/alpha OS=Pongo abelii GN=YWHAB PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.434e-36
Identity = 74/108 (68.52%), Postives = 87/108 (80.56%), Query Frame = 2
Query:    5 TGDERKDVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQ 328
            +GD ++     S +AYQ A   ++ E+ PTHPIRLGLALNFSVFYYEI+NSPE+AC LAK AFDEAI+ELDTL+EESYKDSTLIMQLLRDNLTLWTS+   D GD  +
Sbjct:  136 SGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGDAGE 243          
BLAST of DR908175 vs. ExPASy Swiss-Prot
Match: 1433B_MACFA (14-3-3 protein beta/alpha OS=Macaca fascicularis GN=YWHAB PE=2 SV=3)

HSP 1 Score: 151.754 bits (382), Expect = 3.434e-36
Identity = 74/108 (68.52%), Postives = 87/108 (80.56%), Query Frame = 2
Query:    5 TGDERKDVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQ 328
            +GD ++     S +AYQ A   ++ E+ PTHPIRLGLALNFSVFYYEI+NSPE+AC LAK AFDEAI+ELDTL+EESYKDSTLIMQLLRDNLTLWTS+   D GD  +
Sbjct:  136 SGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGDAGE 243          
BLAST of DR908175 vs. ExPASy Swiss-Prot
Match: 1433B_HUMAN (14-3-3 protein beta/alpha OS=Homo sapiens GN=YWHAB PE=1 SV=3)

HSP 1 Score: 151.754 bits (382), Expect = 3.434e-36
Identity = 74/108 (68.52%), Postives = 87/108 (80.56%), Query Frame = 2
Query:    5 TGDERKDVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQ 328
            +GD ++     S +AYQ A   ++ E+ PTHPIRLGLALNFSVFYYEI+NSPE+AC LAK AFDEAI+ELDTL+EESYKDSTLIMQLLRDNLTLWTS+   D GD  +
Sbjct:  136 SGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGDAGE 243          
BLAST of DR908175 vs. ExPASy Swiss-Prot
Match: 1433B_CHICK (14-3-3 protein beta/alpha OS=Gallus gallus GN=YWHAB PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.434e-36
Identity = 74/108 (68.52%), Postives = 88/108 (81.48%), Query Frame = 2
Query:    5 TGDERKDVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQ 328
            +GD ++     S +AYQ A   ++ E+ PTHPIRLGLALNFSVFYYEI+NSPE+AC+LAK AFDEAI+ELDTL+EESYKDSTLIMQLLRDNLTLWTS+   D GD  +
Sbjct:  134 SGDNKQTTVANSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACNLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGDAGE 241          
BLAST of DR908175 vs. ExPASy Swiss-Prot
Match: 1433B_BOVIN (14-3-3 protein beta/alpha OS=Bos taurus GN=YWHAB PE=1 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 3.434e-36
Identity = 74/108 (68.52%), Postives = 87/108 (80.56%), Query Frame = 2
Query:    5 TGDERKDVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQ 328
            +GD ++     S +AYQ A   ++ E+ PTHPIRLGLALNFSVFYYEI+NSPE+AC LAK AFDEAI+ELDTL+EESYKDSTLIMQLLRDNLTLWTS+   D GD  +
Sbjct:  136 SGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGDAGE 243          
BLAST of DR908175 vs. ExPASy Swiss-Prot
Match: 143B1_ONCMY (14-3-3 protein beta/alpha-1 OS=Oncorhynchus mykiss PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.485e-36
Identity = 73/108 (67.59%), Postives = 88/108 (81.48%), Query Frame = 2
Query:    5 TGDERKDVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQ 328
            +GD +K   + S +AYQ A   ++ ++ PTHPIRLGLALNFSVFYYEI+NSPE+AC LAK AFDEAI+ELDTL+E+SYKDSTLIMQLLRDNLTLWTS+   D GD  +
Sbjct:  134 SGDSKKTTVENSQQAYQEAFDISKKDMQPTHPIRLGLALNFSVFYYEILNSPEQACSLAKAAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSENQGDEGDAGE 241          
The following BLAST results are available for this feature:
BLAST of DR908175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
143G2_ONCMY2.629e-3666.9714-3-3 protein gamma-2 OS=Oncorhynchus mykiss PE=2... [more]
1433B_SOYBN2.629e-3671.5714-3-3-like protein B (Fragment) OS=Glycine max GN... [more]
1433_XENLA3.434e-3667.5714-3-3-like protein (Fragment) OS=Xenopus laevis P... [more]
1433B_RAT3.434e-3668.5214-3-3 protein beta/alpha OS=Rattus norvegicus GN=... [more]
1433B_PONAB3.434e-3668.5214-3-3 protein beta/alpha OS=Pongo abelii GN=YWHAB... [more]
1433B_MACFA3.434e-3668.5214-3-3 protein beta/alpha OS=Macaca fascicularis G... [more]
1433B_HUMAN3.434e-3668.5214-3-3 protein beta/alpha OS=Homo sapiens GN=YWHAB... [more]
1433B_CHICK3.434e-3668.5214-3-3 protein beta/alpha OS=Gallus gallus GN=YWHA... [more]
1433B_BOVIN3.434e-3668.5214-3-3 protein beta/alpha OS=Bos taurus GN=YWHAB P... [more]
143B1_ONCMY4.485e-3667.5914-3-3 protein beta/alpha-1 OS=Oncorhynchus mykiss... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_16303 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-32_D08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908175 ID=DR908175; Name=DR908175; organism=Citrus sinensis; type=EST; length=703bp
TAAGACTGGTGATGAGAGGAAAGATGTTGCTGATCTGTCAATGAAAGCCT
ATCAGGCAGCTTCTACTACCGCAGAAGCTGAATTGTCTCCTACCCACCCC
ATCCGACTTGGTTTGGCCTTGAACTTCTCAGTTTTTTACTATGAGATTAT
GAACTCTCCTGAAAGGGCATGCCACCTTGCAAAGCAGGCCTTTGATGAAG
CCATCTCAGAATTGGATACATTAAGTGAGGAATCTTACAAAGACAGCACG
TTGATAATGCAGCTATTGAGGGACAACCTCACTCTTTGGACTTCTGACAT
ACCAGAGGATGGAGGTGATGAAGCCCAGAAAATGGACATCTCTGCTAAAG
ATGGTGAAGGTGAAGATTGAAGAAGCAGAGGTGGGTTTGTTTTCCTATTT
TGGAGCACAGTTGCAATCTTTGTTGTTTTCTGTCCTCAGTGAACCAGCCA
GGAGCTTGGGAGCTCTAGCATATGATAGCAAGGAAGCTGCAATACCTTTA
TGACTCCCGGTGTTTTTCTTAGTTTACAAGAGACACTCAAGTACTGTTAT
TGTGCTGTTCCTATAATGTGGGTGTTATCTTCACTGTCAAGAGTTTCATG
ATTGGACTGCTTGTATCATTTGCATCCCAGAATCTTTTATATCTGCTGCC
GCTGATCAATTTGGACTTGGTGTTAAGACCACTTTGCACTTTAAAAAAAA
AAA
back to top