DR908105
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908105 vs. ExPASy Swiss-Prot
Match: SODM_THEAQ (Superoxide dismutase [Mn] OS=Thermus aquaticus GN=sodA PE=3 SV=2) HSP 1 Score: 175.637 bits (444), Expect = 2.303e-43 Identity = 92/199 (46.23%), Postives = 121/199 (60.80%), Query Frame = 1 Query: 1 LPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQL-------FQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 576 L Y Y ALEP I M++HHQKHH AYVTN N A+E+ + L + T+ +Q A++ NGGGH+NHS+FW+ L P GG + P L AID FG AL +K++ GSGW WL D F +L V +TANQD V P++GIDVWEHAYYL+Y+N + DYL+ IWNV+NW A ++Y+ Sbjct: 10 LGYPYEALEPHIDARTMEIHHQKHHGAYVTNLNAALEKYPYLQGAEVETLLRHLTALPADIQAAVRNNGGGHLNHSLFWRLLTP---GGAKEPVGELKKAIDEQFGGFAALKEKLTQAAMGRFGSGWAWLVKDP-FGKLHVISTANQDNPVMGG--FAPIVGIDVWEHAYYLKYQNRRADYLQAIWNVLNWDVAEEIYK 202
BLAST of DR908105 vs. ExPASy Swiss-Prot
Match: SODM_THET8 (Superoxide dismutase [Mn] OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=sodA PE=1 SV=2) HSP 1 Score: 174.866 bits (442), Expect = 3.928e-43 Identity = 92/201 (45.77%), Postives = 127/201 (63.18%), Query Frame = 1 Query: 1 LPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQ--------LQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 579 L Y Y ALEP I + M++HHQKHH AYVTN N A+E+ + L+ V+ +++ +Q A++ NGGGH+NHS+FW+ L P GG + P L AID FG +AL +K++ GSGW WL D F +L V +T NQD V + T P++GIDVWEHAYYL+Y+N + DYL+ IWNV+NW A + ++K Sbjct: 10 LGYPYEALEPHIDAKTMEIHHQKHHGAYVTNLNAALEK-YPYLHGVEVEVLLRHLAALPQDIQTAVRNNGGGHLNHSLFWRLLTP---GGAKEPVGELKKAIDEQFGGFQALKEKLTQAAMGRFGSGWAWLVKDP-FGKLHVLSTPNQDNPVMEGFT--PIVGIDVWEHAYYLKYQNRRADYLQAIWNVLNWDVAEEFFKK 203
BLAST of DR908105 vs. ExPASy Swiss-Prot
Match: SODM_THET2 (Superoxide dismutase [Mn] OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=sodA PE=3 SV=2) HSP 1 Score: 174.866 bits (442), Expect = 3.928e-43 Identity = 92/201 (45.77%), Postives = 127/201 (63.18%), Query Frame = 1 Query: 1 LPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQ--------LQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 579 L Y Y ALEP I + M++HHQKHH AYVTN N A+E+ + L+ V+ +++ +Q A++ NGGGH+NHS+FW+ L P GG + P L AID FG +AL +K++ GSGW WL D F +L V +T NQD V + T P++GIDVWEHAYYL+Y+N + DYL+ IWNV+NW A + ++K Sbjct: 10 LGYPYEALEPHIDAKTMEIHHQKHHGAYVTNLNAALEK-YPYLHGVEVEVLLRHLAALPQDIQTAVRNNGGGHLNHSLFWRLLTP---GGAKEPVGELKKAIDEQFGGFQALKEKLTQAAMGRFGSGWAWLVKDP-FGKLHVLSTPNQDNPVMEGFT--PIVGIDVWEHAYYLKYQNRRADYLQAIWNVLNWDVAEEFFKK 203
BLAST of DR908105 vs. ExPASy Swiss-Prot
Match: SODM_CORDI (Superoxide dismutase [Mn] OS=Corynebacterium diphtheriae GN=sodA PE=3 SV=2) HSP 1 Score: 174.866 bits (442), Expect = 3.928e-43 Identity = 95/185 (51.35%), Postives = 113/185 (61.08%), Query Frame = 1 Query: 1 LPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQ-LQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNW 552 L Y Y ALEP I+ EIM+LHH KHH YV N A+E+L +A + VV L + FN GGH NHSIFWKNL+P GGGEP +L AI FGS E SA LQGSGW LG D RLV+E +Q ++ L PLL +D+WEHA+YLQYKNVK DY+K +WNV NW Sbjct: 8 LDYAYDALEPHIAAEIMELHHSKHHANYVNGANAALEKLQKARENGEIGAVVTALSKDLAFNLGGHTNHSIFWKNLSP--NGGGEPT-GALAEAIAKEFGSFEKFKDHFSAAALGLQGSGWAVLGYDHIGGRLVIEQLTDQQGNISA--NLTPLLMLDMWEHAFYLQYKNVKADYVKAVWNVFNW 187
BLAST of DR908105 vs. ExPASy Swiss-Prot
Match: SODM_MYCFO (Superoxide dismutase [Mn] OS=Mycobacterium fortuitum GN=sodA PE=3 SV=2) HSP 1 Score: 174.481 bits (441), Expect = 5.130e-43 Identity = 90/191 (47.12%), Postives = 117/191 (61.26%), Query Frame = 1 Query: 1 LPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 573 L YDY ALEP ISG+I +LHH KHH AYV N AV +L +A D + + + + F+ GGHVNHSI+WKNL+P GG+ P L AID FGS + + +A LQGSGW LG D+ RL+ +Q V ++PLL +D+WEHA+YLQYKNVK DY+K WNV+NW+ + Y Sbjct: 9 LDYDYGALEPHISGQINELHHSKHHAAYVKGVNDAVAKLDEARANGDHAAIFLNEKNLAFHLGGHVNHSIWWKNLSP---NGGDKPTGDLAAAIDDQFGSFDKFQAQFTAAANGLQGSGWAVLGYDSLGDRLLTFQLYDQQANVPLG--IIPLLQVDMWEHAFYLQYKNVKADYVKAFWNVVNWEDVQNRY 194
BLAST of DR908105 vs. ExPASy Swiss-Prot
Match: SODM_MYCLE (Superoxide dismutase [Mn] OS=Mycobacterium leprae GN=sodA PE=3 SV=3) HSP 1 Score: 173.711 bits (439), Expect = 8.750e-43 Identity = 89/184 (48.37%), Postives = 116/184 (63.04%), Query Frame = 1 Query: 1 LPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNW 552 L +DY+ALEP ISGEI ++HH KHH AYV N A+ +L +A K D S + + + F+ GGHVNHSI+WKNL+P GG+ P L ID FGS + + SA LQGSGW LG DT +L+ +Q V+ ++PLL +D+WEHA+YLQYKNVK DY+K WNV+NW Sbjct: 9 LDWDYAALEPHISGEINEIHHTKHHAAYVKGVNDALAKLDEARAKDDHSAIFLNEKNLAFHLGGHVNHSIWWKNLSP---NGGDKPTGGLATDIDETFGSFDKFRAQFSAAANGLQGSGWAVLGYDTLGNKLLTFQLYDQQANVSLG--IIPLLQVDMWEHAFYLQYKNVKADYVKAFWNVVNW 187
BLAST of DR908105 vs. ExPASy Swiss-Prot
Match: SODM1_PLEBO (Superoxide dismutase [Mn] 1 OS=Plectonema boryanum GN=sodA1 PE=2 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 3.325e-42 Identity = 91/202 (45.05%), Postives = 124/202 (61.39%), Query Frame = 1 Query: 1 LPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNK-----------AVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 573 LPYDY+ALEP I + M+LHH KHH YV N N+ +V+ L Q LN+V + ++ I+ NGGGHVNH++FW+ +AP + GG P ++ AID FGS +A Q+ + GA GSGW WL D + K L + +TANQD + P P+LG DVWEHAYYL+Y+N + +YL N WNV+NW+ + Y Sbjct: 49 LPYDYAALEPYIDAQTMRLHHDKHHATYVNNINETLKAYPDLQKQSVDSLIQNLNQVPEA----IRTKIRNNGGGHVNHTMFWQIMAP--KAGGTPT-GAVAKAIDQTFGSFDAFKQQFNKAGADRFGSGWAWLVSDRQGK-LSITSTANQDNPLMSNPNAYPILGNDVWEHAYYLKYQNRRAEYLTNWWNVVNWQAVNQRY 242
BLAST of DR908105 vs. ExPASy Swiss-Prot
Match: SODM_MYCSM (Superoxide dismutase [Mn] OS=Mycobacterium smegmatis GN=sodA PE=1 SV=4) HSP 1 Score: 170.629 bits (431), Expect = 7.407e-42 Identity = 86/184 (46.74%), Postives = 113/184 (61.41%), Query Frame = 1 Query: 1 LPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNW 552 L YDY ALEP ISG+I +LHH KHH YV N A+ +L +A D + + + + F+ GGH+NHSI+WKNL+P GG+ P L AID FGS + + +A LQGSGW LG D+ RL+ +Q V ++PLL +D+WEHA+YLQYKNVK DY+K WNV+NW Sbjct: 9 LDYDYGALEPHISGQINELHHSKHHATYVKGVNDAIAKLEEARANGDHAAIFLNEKNLAFHLGGHINHSIWWKNLSP---NGGDKPTGELAAAIDDQFGSFDKFQAQFTAAANGLQGSGWAVLGYDSLGGRLLTFQLYDQQANVPLG--IIPLLQVDMWEHAFYLQYKNVKADYVKAFWNVVNW 187
BLAST of DR908105 vs. ExPASy Swiss-Prot
Match: SODM_MYCS2 (Superoxide dismutase [Mn] OS=Mycobacterium smegmatis GN=sodA PE=1 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 7.407e-42 Identity = 86/184 (46.74%), Postives = 113/184 (61.41%), Query Frame = 1 Query: 1 LPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNW 552 L YDY ALEP ISG+I +LHH KHH YV N A+ +L +A D + + + + F+ GGH+NHSI+WKNL+P GG+ P L AID FGS + + +A LQGSGW LG D+ RL+ +Q V ++PLL +D+WEHA+YLQYKNVK DY+K WNV+NW Sbjct: 9 LDYDYGALEPHISGQINELHHSKHHATYVKGVNDAIAKLEEARANGDHAAIFLNEKNLAFHLGGHINHSIWWKNLSP---NGGDKPTGELAAAIDDQFGSFDKFQAQFTAAANGLQGSGWAVLGYDSLGGRLLTFQLYDQQANVPLG--IIPLLQVDMWEHAFYLQYKNVKADYVKAFWNVVNW 187
BLAST of DR908105 vs. ExPASy Swiss-Prot
Match: SODM_MYCPA (Superoxide dismutase [Mn] OS=Mycobacterium paratuberculosis GN=sodA PE=1 SV=3) HSP 1 Score: 170.629 bits (431), Expect = 7.407e-42 Identity = 87/184 (47.28%), Postives = 114/184 (61.96%), Query Frame = 1 Query: 1 LPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNW 552 L +DY+ALEP ISG+I ++HH KHH YV N A+ +L +A D + + + + F+ GGHVNHSI+WKNL+P GG+ P L AID FGS + + SA LQGSGW LG DT RL+ +Q V ++PLL +D+WEHA+YLQYKNVK DY+K WNV+NW Sbjct: 9 LDWDYAALEPHISGQINEIHHTKHHATYVKGVNDALAKLEEARANEDHAAIFLNEKNLAFHLGGHVNHSIWWKNLSP---DGGDKPTGELAAAIDDAFGSFDKFRAQFSAAANGLQGSGWAVLGYDTVGSRLLTFQLYDQQANVPLG--IIPLLQVDMWEHAFYLQYKNVKADYVKAFWNVVNW 187 The following BLAST results are available for this feature:
BLAST of DR908105 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 225
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908105 ID=DR908105; Name=DR908105; organism=Citrus sinensis; type=EST; length=722bpback to top |