DR908085
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_PROMH (Glutaminyl-tRNA synthetase OS=Proteus mirabilis (strain HI4320) GN=glnS PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.119e-35 Identity = 61/166 (36.75%), Postives = 92/166 (55.42%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPSKKTKP-------KGVLHWVAEP 481 T+ SI F Q IG+++ D+ + + LE IR++LN+ APR M V++P+++VI NM G + L A P+ +VPFS +YI+ +DF+ + ++ Y L GK V LR A+ IK E + D++ I I YDP K KGV+HWV+ P Sbjct: 303 TAESIREFCQRIGVTKQDNNVEMASLEACIRDDLNENAPRAMAVIDPVRLVIENMPEGEEI-LTAPNHPN---KPEMGTREVPFSREIYIDRADFKEEANRQYKRLVLGKEVRLRNAYVIK-AERVEKDEQGEITTIYCTYDPQTLNKDPADGRKVKGVIHWVSIP 463 HSP 2 Score: 73.559 bits (179), Expect = 1.119e-35 Identity = 37/74 (50.00%), Postives = 52/74 (70.27%), Query Frame = 3 Query: 510 EVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVDKDSTPEKLVFNRT 731 E+RL+++LF+ NP +D+LS +NP+S +VI + + E SL AA+ +QFER G F DK ST +KLVFNRT Sbjct: 469 EIRLYDRLFSVPNPGAEEDFLSTINPES-LVIRQGFVEASLKDAAIEKAYQFEREGYFCADKLSTADKLVFNRT 541
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_PHOPR (Glutaminyl-tRNA synthetase OS=Photobacterium profundum GN=glnS PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.457e-35 Identity = 63/164 (38.41%), Postives = 89/164 (54.27%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYD-------PSKKTKPKGVLHWVA 475 TS SI F + IG+++ ++ I + LE IR++LN+ APR M VL+P+K+VI N T + L P+ + +VPF+ ++IE DFR + +K Y L GK V LR A+ IK E I D + I I YD PS K KGV+HWV+ Sbjct: 304 TSASIREFCKRIGVTKQENTIEMSSLESCIRDDLNENAPRAMAVLDPVKIVIENFTGDTEV-LTVSNHPN---NSEMGTREVPFTREIWIEREDFREEANKKYKRLVLGKEVRLRGAYVIK-AERIEKDAEGNITTIFCSYDNETLGVNPSDGRKVKGVIHWVS 462 HSP 2 Score: 74.7146 bits (182), Expect = 1.457e-35 Identity = 39/75 (52.00%), Postives = 52/75 (69.33%), Query Frame = 3 Query: 510 EVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731 E+RL+++LF NPA DD+++ +NP+S V+ + EPSL A FQFER+G F VD KDS+ EKLVFNRT Sbjct: 470 EIRLYDRLFTVANPAAADDFVTVINPESLTVL-NGFVEPSLKVAEAEKAFQFERIGYFCVDSKDSSAEKLVFNRT 543
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_SALTY (Glutaminyl-tRNA synthetase OS=Salmonella typhimurium GN=glnS PE=3 SV=3) HSP 1 Score: 95.5153 bits (236), Expect = 1.457e-35 Identity = 60/164 (36.59%), Postives = 88/164 (53.66%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEY-------DPSKKTKPKGVLHWVA 475 T+ SI F + IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N G + P+ +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E + D + I I Y DP+ K KGV+HWV+ Sbjct: 303 TAASIREFCKRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYPQG---ESEMVTMPNHPNKPEMGSREVPFSGEIWIDRADFREEANKQYKRLVMGKEVRLRNAYVIK-AERVEKDAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS 462 HSP 2 Score: 75.485 bits (184), Expect = 1.457e-35 Identity = 38/76 (50.00%), Postives = 55/76 (72.37%), Query Frame = 3 Query: 507 VEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731 +E+RL+++LF+ NP +D+LS +NP+S +VI + Y EPSL +A G FQFER G F +D + +T +KLVFNRT Sbjct: 469 IEIRLYDRLFSVPNPGAAEDFLSVINPES-LVIKQGYGEPSLKAAVAGKAFQFEREGYFCLDSRYATADKLVFNRT 543
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_SALTI (Glutaminyl-tRNA synthetase OS=Salmonella typhi GN=glnS PE=3 SV=3) HSP 1 Score: 95.5153 bits (236), Expect = 1.457e-35 Identity = 60/164 (36.59%), Postives = 88/164 (53.66%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEY-------DPSKKTKPKGVLHWVA 475 T+ SI F + IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N G + P+ +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E + D + I I Y DP+ K KGV+HWV+ Sbjct: 303 TAASIREFCKRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYPQG---ESEMVTMPNHPNKPEMGSREVPFSGEIWIDRADFREEANKQYKRLVMGKEVRLRNAYVIK-AERVEKDAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS 462 HSP 2 Score: 75.485 bits (184), Expect = 1.457e-35 Identity = 38/76 (50.00%), Postives = 55/76 (72.37%), Query Frame = 3 Query: 507 VEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731 +E+RL+++LF+ NP +D+LS +NP+S +VI + Y EPSL +A G FQFER G F +D + +T +KLVFNRT Sbjct: 469 IEIRLYDRLFSVPNPGAAEDFLSVINPES-LVIKQGYGEPSLKAAVAGKAFQFEREGYFCLDSRYATADKLVFNRT 543
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_SALSV (Glutaminyl-tRNA synthetase OS=Salmonella schwarzengrund (strain CVM19633) GN=glnS PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.457e-35 Identity = 60/164 (36.59%), Postives = 88/164 (53.66%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEY-------DPSKKTKPKGVLHWVA 475 T+ SI F + IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N G + P+ +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E + D + I I Y DP+ K KGV+HWV+ Sbjct: 303 TAASIREFCKRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYPQG---ESEMVTMPNHPNKPEMGSREVPFSGEIWIDRADFREEANKQYKRLVMGKEVRLRNAYVIK-AERVEKDAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS 462 HSP 2 Score: 75.485 bits (184), Expect = 1.457e-35 Identity = 38/76 (50.00%), Postives = 55/76 (72.37%), Query Frame = 3 Query: 507 VEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731 +E+RL+++LF+ NP +D+LS +NP+S +VI + Y EPSL +A G FQFER G F +D + +T +KLVFNRT Sbjct: 469 IEIRLYDRLFSVPNPGAAEDFLSVINPES-LVIKQGYGEPSLKAAVAGKAFQFEREGYFCLDSRYATADKLVFNRT 543
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_SALPK (Glutaminyl-tRNA synthetase OS=Salmonella paratyphi A (strain AKU_12601) GN=glnS PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.457e-35 Identity = 60/164 (36.59%), Postives = 88/164 (53.66%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEY-------DPSKKTKPKGVLHWVA 475 T+ SI F + IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N G + P+ +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E + D + I I Y DP+ K KGV+HWV+ Sbjct: 303 TAASIREFCKRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYPQG---ESEMVTMPNHPNKPEMGSREVPFSGEIWIDRADFREEANKQYKRLVMGKEVRLRNAYVIK-AERVEKDAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS 462 HSP 2 Score: 75.485 bits (184), Expect = 1.457e-35 Identity = 38/76 (50.00%), Postives = 55/76 (72.37%), Query Frame = 3 Query: 507 VEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731 +E+RL+++LF+ NP +D+LS +NP+S +VI + Y EPSL +A G FQFER G F +D + +T +KLVFNRT Sbjct: 469 IEIRLYDRLFSVPNPGAAEDFLSVINPES-LVIKQGYGEPSLKAAVAGKAFQFEREGYFCLDSRYATADKLVFNRT 543
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_SALPC (Glutaminyl-tRNA synthetase OS=Salmonella paratyphi C (strain RKS4594) GN=glnS PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.457e-35 Identity = 60/164 (36.59%), Postives = 88/164 (53.66%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEY-------DPSKKTKPKGVLHWVA 475 T+ SI F + IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N G + P+ +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E + D + I I Y DP+ K KGV+HWV+ Sbjct: 303 TAASIREFCKRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYPQG---ESEMVTMPNHPNKPEMGSREVPFSGEIWIDRADFREEANKQYKRLVMGKEVRLRNAYVIK-AERVEKDAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS 462 HSP 2 Score: 75.485 bits (184), Expect = 1.457e-35 Identity = 38/76 (50.00%), Postives = 55/76 (72.37%), Query Frame = 3 Query: 507 VEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731 +E+RL+++LF+ NP +D+LS +NP+S +VI + Y EPSL +A G FQFER G F +D + +T +KLVFNRT Sbjct: 469 IEIRLYDRLFSVPNPGAAEDFLSVINPES-LVIKQGYGEPSLKAAVAGKAFQFEREGYFCLDSRYATADKLVFNRT 543
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_SALPA (Glutaminyl-tRNA synthetase OS=Salmonella paratyphi A GN=glnS PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.457e-35 Identity = 60/164 (36.59%), Postives = 88/164 (53.66%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEY-------DPSKKTKPKGVLHWVA 475 T+ SI F + IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N G + P+ +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E + D + I I Y DP+ K KGV+HWV+ Sbjct: 303 TAASIREFCKRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYPQG---ESEMVTMPNHPNKPEMGSREVPFSGEIWIDRADFREEANKQYKRLVMGKEVRLRNAYVIK-AERVEKDAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS 462 HSP 2 Score: 75.485 bits (184), Expect = 1.457e-35 Identity = 38/76 (50.00%), Postives = 55/76 (72.37%), Query Frame = 3 Query: 507 VEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731 +E+RL+++LF+ NP +D+LS +NP+S +VI + Y EPSL +A G FQFER G F +D + +T +KLVFNRT Sbjct: 469 IEIRLYDRLFSVPNPGAAEDFLSVINPES-LVIKQGYGEPSLKAAVAGKAFQFEREGYFCLDSRYATADKLVFNRT 543
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_SALHS (Glutaminyl-tRNA synthetase OS=Salmonella heidelberg (strain SL476) GN=glnS PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.457e-35 Identity = 60/164 (36.59%), Postives = 88/164 (53.66%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEY-------DPSKKTKPKGVLHWVA 475 T+ SI F + IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N G + P+ +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E + D + I I Y DP+ K KGV+HWV+ Sbjct: 303 TAASIREFCKRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYPQG---ESEMVTMPNHPNKPEMGSREVPFSGEIWIDRADFREEANKQYKRLVMGKEVRLRNAYVIK-AERVEKDAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS 462 HSP 2 Score: 75.485 bits (184), Expect = 1.457e-35 Identity = 38/76 (50.00%), Postives = 55/76 (72.37%), Query Frame = 3 Query: 507 VEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731 +E+RL+++LF+ NP +D+LS +NP+S +VI + Y EPSL +A G FQFER G F +D + +T +KLVFNRT Sbjct: 469 IEIRLYDRLFSVPNPGAAEDFLSVINPES-LVIKQGYGEPSLKAAVAGKAFQFEREGYFCLDSRYATADKLVFNRT 543
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_SALG2 (Glutaminyl-tRNA synthetase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=glnS PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.457e-35 Identity = 60/164 (36.59%), Postives = 88/164 (53.66%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEY-------DPSKKTKPKGVLHWVA 475 T+ SI F + IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N G + P+ +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E + D + I I Y DP+ K KGV+HWV+ Sbjct: 303 TAASIREFCKRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYPQG---ESEMVTMPNHPNKPEMGSREVPFSGEIWIDRADFREEANKQYKRLVMGKEVRLRNAYVIK-AERVEKDAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS 462 HSP 2 Score: 75.485 bits (184), Expect = 1.457e-35 Identity = 38/76 (50.00%), Postives = 55/76 (72.37%), Query Frame = 3 Query: 507 VEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731 +E+RL+++LF+ NP +D+LS +NP+S +VI + Y EPSL +A G FQFER G F +D + +T +KLVFNRT Sbjct: 469 IEIRLYDRLFSVPNPGAAEDFLSVINPES-LVIKQGYGEPSLKAAVAGKAFQFEREGYFCLDSRYATADKLVFNRT 543 The following BLAST results are available for this feature:
BLAST of DR908085 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 150
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908085 ID=DR908085; Name=DR908085; organism=Citrus sinensis; type=EST; length=731bpback to top |