DR908085
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_XANAC (Glutaminyl-tRNA synthetase OS=Xanthomonas axonopodis pv. citri GN=glnS PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.551e-27 Identity = 58/164 (35.37%), Postives = 89/164 (54.27%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPSKK-------TKPKGVLHWVA 475 T ++ FV +GIS+ +SLI LE +RE+L+ APR M V++PLK+V+TN+ G H + ++ + DD+ +VPF+ ++IE DF K + L PG + LR A + EVI + D E I+ +R DP + K KG +HWV+ Sbjct: 327 TPAAMRLFVDRVGISKQNSLIDFSVLEGCLREDLDAAAPRRMAVIDPLKLVLTNLPEG---HTETLQFSNHPKDDSFGTREVPFARELWIEREDFAEVPPKGWKRLVPGGEIRLRGAGIARVDEVIKNADGE-IVELRGWLDPESRPGMEGANRKVKGTIHWVS 486 HSP 2 Score: 49.6766 bits (117), Expect = 1.551e-27 Identity = 32/78 (41.03%), Postives = 44/78 (56.41%), Query Frame = 3 Query: 510 EVRLFEKLFNSENP---AELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731 E+RL+++LF+ E P +E + LNP+SK + Y EPS AA FQFER G F D +D + VFNR+ Sbjct: 494 EIRLYDRLFSVEKPDDESEGKTYRDYLNPESKRNV-RGYVEPSAAMAAPEQAFQFERTGYFVADRRDHSEATPVFNRS 570
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_RALPJ (Glutaminyl-tRNA synthetase OS=Ralstonia pickettii (strain 12J) GN=glnS PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.551e-27 Identity = 53/165 (32.12%), Postives = 81/165 (49.09%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPSKKT--------KPKGVLHWVA 475 T SI F + +G+S++DS I + LE +R++L+ APR++ VL+P+K+V+ N+ + A P F P + ++IE DF K Y+ L PG V LRY + I+CT D I + A P K+ K KG +HWV+ Sbjct: 325 TPESIQLFCERVGVSKADSWIDMSILEGAVRDDLDARAPRSVAVLDPVKLVLDNVPADFNEPCSAPVHPKQPELGRREF---PLTRELWIEREDFTETPPKGYFRLFPGNKVRLRYGYVIECTGCD-KDAAGNITAVHANIIPDTKSGTPGADSVKVKGNIHWVS 485 HSP 2 Score: 64.3142 bits (155), Expect = 1.551e-27 Identity = 37/75 (49.33%), Postives = 51/75 (68.00%), Query Frame = 3 Query: 510 EVRLFEKLFNSENPAELD-DWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVDK-DSTPEKLVFNR 728 EVRL+++LF+ P D ++L LNP+SK ++ +A+ EP+L +A DRFQFER G F D+ DS P K VFNR Sbjct: 493 EVRLYDRLFSDPQPDSGDKNFLDALNPNSKKIV-KAFLEPTLATAKAEDRFQFERHGYFVADRIDSQPGKPVFNR 566
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_ACTSZ (Glutaminyl-tRNA synthetase OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=glnS PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 3.422e-27 Identity = 56/164 (34.15%), Postives = 87/164 (53.05%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYD-------PSKKTKPKGVLHWVA 475 T S+ F + IG+++ D+++ LE IR++LN APR M V+NPLKV+I N E+ + + P+ + +V + +YI+ +DFR + +K Y L GK V LR A+ IK E + D + I+ + YD PS K KGV+ WV+ Sbjct: 314 TPASLREFCRRIGVTKQDNVVEFSALESCIRDDLNINAPRAMAVINPLKVIIENFETPETLTM-----PNHPNREEMGTRQVQLTKELYIDQADFREEANKQYKRLVLGKEVRLRNAYIIK-AERVEKDAEGNIVCVYCSYDPETLGKNPSDGRKVKGVIQWVS 471 HSP 2 Score: 52.7582 bits (125), Expect = 3.422e-27 Identity = 29/75 (38.67%), Postives = 44/75 (58.67%), Query Frame = 3 Query: 510 EVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731 E R + +LF NP +D ++ +NP S +V+ + + E S+ +A +QFER G + D KDS P+ LVFN T Sbjct: 479 EFRQYSRLFTMPNPGSEEDIIAAINPQS-LVVRQGFVERSVANALSEKAYQFEREGYYCADSKDSRPDHLVFNLT 552
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_XANC5 (Glutaminyl-tRNA synthetase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=glnS PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 5.795e-27 Identity = 57/164 (34.76%), Postives = 89/164 (54.27%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPSKK-------TKPKGVLHWVA 475 T ++ FV +GIS+ +SLI LE +RE+L+ APR M V++PLK+V+TN+ G H + ++ + D++ +VPF+ ++IE DF K + L PG + LR A + EVI + D E I+ +R DP + K KG +HWV+ Sbjct: 327 TPAAMRLFVDRVGISKQNSLIDFSVLEGCLREDLDAAAPRRMAVIDPLKLVLTNLPEG---HTETLQFSNHPKDESFGTREVPFARELWIEREDFAEVPPKGWKRLVPGGEIRLRGAGIARVDEVIKNADGE-IVELRGWLDPESRPGMEGANRKVKGTIHWVS 486 HSP 2 Score: 49.2914 bits (116), Expect = 5.795e-27 Identity = 32/78 (41.03%), Postives = 44/78 (56.41%), Query Frame = 3 Query: 510 EVRLFEKLFNSENP---AELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731 E+RL+++LF+ E P +E + LNP+SK + Y EPS AA FQFER G F D +D + VFNR+ Sbjct: 494 EIRLYDRLFSVEKPDDESEGKTYRDYLNPESKRNV-RGYVEPSAAMAAPEQAFQFERSGYFVADRRDHSAATPVFNRS 570
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_POLSQ (Glutaminyl-tRNA synthetase OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=glnS PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.817e-27 Identity = 53/171 (30.99%), Postives = 82/171 (47.95%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYY------GLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPSKKT--------KPKGVLHWVA 475 T SI F + IG+S++DS I + L+ +R++L APR VL PLK+V+ N ++ A R P F F+ ++IE DF + K ++ G PG V LR+ F ++CT+ +D K I + Y P K+ K KG +HW++ Sbjct: 334 TPESIRLFCERIGVSKADSWIDMSTLDQALRDDLEARAPRATAVLKPLKLVVENFDAAHSEACSAPRHPHHPEWGNREF---NFTKELWIEADDFMQEPVKGFFRLYPPIGDQPGSRVRLRHGFVVECTD-FETDAKGNITQVNVNYFPDSKSGTPGSNNYKVKGNIHWIS 500 HSP 2 Score: 60.8474 bits (146), Expect = 9.817e-27 Identity = 37/76 (48.68%), Postives = 46/76 (60.53%), Query Frame = 3 Query: 510 EVRLFEKLFNSENPAELD-DWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVDK-DSTPEKLVFNRT 731 EVRL++ LF +P D ++L +NP SK I +AY EP + DRFQFER G F D+ DS P K VFNRT Sbjct: 508 EVRLYDHLFTDPHPDSGDKNFLDTINPHSKETI-KAYLEPCMKDVKPEDRFQFERHGYFVADQNDSAPGKPVFNRT 582
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_BORA1 (Glutaminyl-tRNA synthetase OS=Bordetella avium (strain 197N) GN=glnS PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 9.818e-27 Identity = 56/165 (33.94%), Postives = 85/165 (51.52%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPSKKT--------KPKGVLHWVA 475 T+++I F +S+SDS I LE +R++L+ R++ VL+PLK+VITN A R P D + + PFS ++IE DFR + K Y+ L PG V L+Y + ++CT D+ I ++AEY P K+ K KG + WV+ Sbjct: 336 TASAIRLFCDRTAVSKSDSRIDYSLLEQAVRDDLDPGTTRSVAVLDPLKLVITNYPKDQTEVCKAPRNPH---DPEAGQREFPFSRELWIERDDFREEAPKKYFRLFPGNLVRLKYGYVVRCTG-FTKDEAGNITEVQAEYLPDTKSGTPGADSVKVKGNITWVS 496 HSP 2 Score: 53.1434 bits (126), Expect = 9.818e-27 Identity = 36/75 (48.00%), Postives = 48/75 (64.00%), Query Frame = 3 Query: 510 EVRLFEKLFNSENPAELD-DWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNR 728 EVRL+++LF +P D D+L+ LNP+S + +A+ EP A G +QFERLG F VD KDS+PE V NR Sbjct: 504 EVRLYDRLFADPHPDGGDKDFLACLNPNSIQTV-QAWLEPGTR-AEPGATWQFERLGYFTVDSKDSSPEAPVLNR 576
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_HAEDU (Glutaminyl-tRNA synthetase OS=Haemophilus ducreyi GN=glnS PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 9.826e-27 Identity = 58/164 (35.37%), Postives = 87/164 (53.05%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYD-------PSKKTKPKGVLHWVA 475 T S+ F + IG+++ D+++ LE IRE+LN+ APR M V+NP++VVI N+ I+ + P+ +PF+ +YI+ +DFR + +K Y L GK V LR A+ IK E + D I I YD P+ K KGV+HWV+ Sbjct: 309 TPASLREFCRRIGVTKQDNVVEYAALEACIREDLNENAPRAMAVINPVRVVIENVAEPEIL-----KAPNHPNRPELGERDLPFTREIYIDEADFREEANKQYKRLVLGKEVRLRNAYVIK-AERVEKDASGKITTIFCSYDPETLGKNPADGRKVKGVIHWVS 466 HSP 2 Score: 48.9062 bits (115), Expect = 9.826e-27 Identity = 25/75 (33.33%), Postives = 45/75 (60.00%), Query Frame = 3 Query: 510 EVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731 E R++ +LFN NP + +D + +NP S +++ + E +L +A +QFER G + +D K+ + + L+FN T Sbjct: 474 EFRIYNRLFNVANPGDEEDINAVINP-SSLIVKHGFVEVNLANAQKEQGYQFEREGYYCLDSKEGSADNLIFNLT 547
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_XANOR (Glutaminyl-tRNA synthetase OS=Xanthomonas oryzae pv. oryzae GN=glnS PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.664e-26 Identity = 56/164 (34.15%), Postives = 90/164 (54.88%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPSKK-------TKPKGVLHWVA 475 T ++ FV+ +GIS+ +SLI LE +RE+L+ A R M V++PLK+V+TN+ G H + ++ + D++ +VPF+ V++IE DF K + L PG + LR A + EVI + D + I+ +R DP + K KG +HWV+ Sbjct: 327 TPAAMRLFVERVGISKQNSLIDFSVLEGCLREDLDAAAARRMAVIDPLKLVLTNLPEG---HTETLQFSNHPKDESFGTREVPFARVLWIEREDFAEVPPKGWKRLVPGGEIRLRGAGIARVDEVIKNADGD-IVALRGWLDPESRPGMEGANRKVKGTIHWVS 486 HSP 2 Score: 49.6766 bits (117), Expect = 1.664e-26 Identity = 32/78 (41.03%), Postives = 44/78 (56.41%), Query Frame = 3 Query: 510 EVRLFEKLFNSENP---AELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731 E+RL+++LF+ E P +E + LNP+SK + Y EPS AA FQFER G F D +D + VFNR+ Sbjct: 494 EIRLYDRLFSVEKPDDESEGKTYRDYLNPESKRNV-RGYVEPSAALAAPEQAFQFERTGYFVADSRDHSASTPVFNRS 570
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_XANOM (Glutaminyl-tRNA synthetase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=glnS PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.664e-26 Identity = 56/164 (34.15%), Postives = 90/164 (54.88%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPSKK-------TKPKGVLHWVA 475 T ++ FV+ +GIS+ +SLI LE +RE+L+ A R M V++PLK+V+TN+ G H + ++ + D++ +VPF+ V++IE DF K + L PG + LR A + EVI + D + I+ +R DP + K KG +HWV+ Sbjct: 327 TPAAMRLFVERVGISKQNSLIDFSVLEGCLREDLDAAAARRMAVIDPLKLVLTNLPEG---HTETLQFSNHPKDESFGTREVPFARVLWIEREDFAEVPPKGWKRLVPGGEIRLRGAGIARVDEVIKNADGD-IVALRGWLDPESRPGMEGANRKVKGTIHWVS 486 HSP 2 Score: 49.6766 bits (117), Expect = 1.664e-26 Identity = 32/78 (41.03%), Postives = 44/78 (56.41%), Query Frame = 3 Query: 510 EVRLFEKLFNSENP---AELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731 E+RL+++LF+ E P +E + LNP+SK + Y EPS AA FQFER G F D +D + VFNR+ Sbjct: 494 EIRLYDRLFSVEKPDDESEGKTYRDYLNPESKRNV-RGYVEPSAALAAPEQAFQFERTGYFVADSRDHSASTPVFNRS 570
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_XYLFM (Glutaminyl-tRNA synthetase OS=Xylella fastidiosa (strain M12) GN=glnS PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 6.215e-26 Identity = 55/166 (33.13%), Postives = 84/166 (50.60%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPSKK-------TKPKGVLHWVAEP 481 T ++ FV+ IGIS+ +S+I LE +RE L+ APR M + P+K+V+TN+ H + +P+ DD VPFS ++IE DF K + L PG V LR A + EV+ + + I+ + DP+ + K KG +HWV+ P Sbjct: 327 TPAAMRLFVERIGISKQNSIIDFSVLENCLRENLDTIAPRRMATIAPMKLVLTNLPED---HEEQLIFPNHPKDDTQGTRTVPFSRELWIERDDFSEVPPKGWKRLVPGGEVRLRGAGIARIDEVVKNAEGH-IIALHGWLDPTSRPGMEGAHRKVKGTIHWVSAP 488 HSP 2 Score: 52.7582 bits (125), Expect = 6.215e-26 Identity = 33/78 (42.31%), Postives = 44/78 (56.41%), Query Frame = 3 Query: 510 EVRLFEKLFNSENPAELDD---WLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVDK-DSTPEKLVFNRT 731 E+RL+++LF+ E P + D + LNPDSK V+ Y EP+ A FQFERLG F D+ D VFNR+ Sbjct: 494 EIRLYDRLFSIEKPDDNTDGKTYRDFLNPDSKRVV-HGYIEPAAAQTAPEHAFQFERLGYFVTDRHDHDATHPVFNRS 570 The following BLAST results are available for this feature:
BLAST of DR908085 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 150
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908085 ID=DR908085; Name=DR908085; organism=Citrus sinensis; type=EST; length=731bpback to top |