DR908085
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_XYLFT (Glutaminyl-tRNA synthetase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=glnS PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 8.089e-26 Identity = 54/166 (32.53%), Postives = 84/166 (50.60%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPSKK-------TKPKGVLHWVAEP 481 T ++ FV+ IGIS+ +S+I LE +RE L+ APR M + P+K+V+TN+ H + +P+ DD VPFS ++IE DF K + L PG V LR A + EV+ + + ++ + DP+ + K KG +HWV+ P Sbjct: 327 TPAAMRLFVERIGISKQNSIIDFSVLENCLRENLDTIAPRRMATIAPMKLVLTNLAED---HEEQLIFPNHPKDDTQGTRTVPFSRELWIERDDFSEAPPKGWKRLIPGGEVRLRGAGIARIDEVVKNAEGH-VIALHGWLDPTSRPGMEGAHRKVKGTIHWVSAP 488 HSP 2 Score: 52.7582 bits (125), Expect = 8.089e-26 Identity = 33/78 (42.31%), Postives = 44/78 (56.41%), Query Frame = 3 Query: 510 EVRLFEKLFNSENPAELDD---WLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVDK-DSTPEKLVFNRT 731 E+RL+++LF+ E P + D + LNPDSK V+ Y EP+ A FQFERLG F D+ D VFNR+ Sbjct: 494 EIRLYDRLFSIEKPDDNTDGKTYRDFLNPDSKRVV-HGYIEPAAAQTAPEHAFQFERLGYFVTDRHDHDATHPVFNRS 570
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_CHRVO (Glutaminyl-tRNA synthetase OS=Chromobacterium violaceum GN=glnS PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.371e-25 Identity = 53/159 (33.33%), Postives = 79/159 (49.69%), Query Frame = 2 Query: 17 INAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPS------KKTKPKGVLHWVA 475 I F Q IG+S+S+++I + LE +RE L +PR M V+NPLKV +TN ++ A P VP + ++IE DF + L G V LRY++ IKC EV+ D + I+ ++ D + K KGV+HWV+ Sbjct: 309 IKLFAQRIGVSKSENIIDMAILEGAVRETLENDSPRVMAVVNPLKVTLTNYDAAVTASRSAPFHPH---HPEFGERDVPIAREIWIERDDFAETPPPKWQRLTAGGEVRLRYSYVIKCDEVV-KDAADEIVELKCSIDHDTLGKNPEGRKVKGVIHWVS 463 HSP 2 Score: 52.7582 bits (125), Expect = 1.371e-25 Identity = 34/83 (40.96%), Postives = 45/83 (54.22%), Query Frame = 3 Query: 510 EVRLFEKLFNSENP-------AELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVDK--DSTPEKLVFNRT 731 +VR +E+LF + P E D+ LNP+S ++P AY E S+ A RFQFERLG F D+ +K VFNRT Sbjct: 471 DVRWYERLFTEQRPDAVRGEDGEYVDFRQFLNPESLKLVP-AYVEASVLQAEPESRFQFERLGYFVTDRYEHRKGDKAVFNRT 552
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_XYLFA (Glutaminyl-tRNA synthetase OS=Xylella fastidiosa GN=glnS PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.784e-25 Identity = 55/166 (33.13%), Postives = 83/166 (50.00%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPSKK-------TKPKGVLHWVAEP 481 T ++ FV+ IGIS+ +S+I LE +RE L+ APR M + PLK+V+TN+ H + +P+ DD +PFS ++IE DF K + L PG V LR A + EV+ + I+ + DP+ + K KG +HWV+ P Sbjct: 327 TPAAMRLFVERIGISKQNSIIDFSVLENCLRENLDTIAPRRMATIAPLKLVLTNLPED---HEEQLIFPNHPKDDTQGTRTMPFSRELWIERDDFSEIPPKGWKRLVPGGEVRLRGAGIARVDEVV-KNAAGDIIALHGWLDPTSRPGMEGAHRKVKGTIHWVSAP 488 HSP 2 Score: 52.7582 bits (125), Expect = 1.784e-25 Identity = 33/78 (42.31%), Postives = 44/78 (56.41%), Query Frame = 3 Query: 510 EVRLFEKLFNSENPAELDD---WLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVDK-DSTPEKLVFNRT 731 E+RL+++LF+ E P + D + LNPDSK V+ Y EP+ A FQFERLG F D+ D VFNR+ Sbjct: 494 EIRLYDRLFSVEKPDDNTDGKTYRDVLNPDSKRVV-HGYIEPAAAQTAPEHAFQFERLGYFVTDRHDHDAAHPVFNRS 570
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_BUCAP (Glutaminyl-tRNA synthetase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=glnS PE=3 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 3.023e-25 Identity = 60/164 (36.59%), Postives = 88/164 (53.66%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYD-------PSKKTKPKGVLHWVA 475 T++SI F IGI++ ++LI LEY IR+ELNK A RTM VL P+K+ + N+++ H + P+ +++ F+N +YIE DF+ K K Y L G+ V LRYA+ IK E I D+ I+ I D P + P V+HW+A Sbjct: 304 TASSIRDFCHRIGITKQNNLIEFSMLEYCIRKELNKKAIRTMAVLEPIKIFLYNIDND---HEEKLIVPNHPKHLHLGTHEIIFTNTIYIEREDFKEKYDKKYKRLKIGEEVRLRYAYIIK-AEKIEKDESGNIIKIICFCDINSLGKKPINRKNP-AVIHWIA 462 HSP 2 Score: 45.4394 bits (106), Expect = 3.023e-25 Identity = 29/81 (35.80%), Postives = 44/81 (54.32%), Query Frame = 3 Query: 516 RLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDR--------FQFERLGTFAVDK-DSTPEKLVFNRT 731 +L+ +LF +NP + ++LS LN +S +++ + E + + FQFER G F VD+ DS KLVFNRT Sbjct: 472 KLYNQLFKIKNPDQEKNFLSYLNSNS-LIVKNGFVEKKIAQKIIKKMSNNFIKLFFQFERTGYFCVDEVDSKENKLVFNRT 551
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_POLNS (Glutaminyl-tRNA synthetase OS=Polynucleobacter necessarius (strain STIR1) GN=glnS PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 3.931e-25 Identity = 51/171 (29.82%), Postives = 83/171 (48.54%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGL------APGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPSKKT--------KPKGVLHWVA 475 T SI F + IG+S++DS I + L+ +R++L APR VL PLK+V+ N ++ T A R P+ F F+ ++IE DF + K ++ L PG V LR+ F ++CT +D + + + + P K+ K KG +HW++ Sbjct: 334 TPESIRLFCERIGVSKADSWIDMSTLDQALRDDLEVRAPRATAVLKPLKLVVENFDAPTKEACSAPRHPNYPEWGNREF---NFTRELWIEADDFMQEPIKGFFRLYPPIDDQPGSRVRLRHGFVVECTG-FETDAQGNVTQVNVTHFPDSKSGTPGSNNYKVKGNIHWIS 500 HSP 2 Score: 59.3066 bits (142), Expect = 3.931e-25 Identity = 36/75 (48.00%), Postives = 45/75 (60.00%), Query Frame = 3 Query: 510 EVRLFEKLFNSENPAELD-DWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVDK-DSTPEKLVFNR 728 EVRL++ LF P D ++L +NP+SK I AY EP + A DRFQFER G F D+ DS P K +FNR Sbjct: 508 EVRLYDHLFTDPYPDSGDKNFLDAINPNSKQTI-SAYLEPCMKDAKAEDRFQFERHGYFVADQSDSKPGKPIFNR 581
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_CLOPS (Glutaminyl-tRNA synthetase OS=Clostridium perfringens (strain SM101 / Type A) GN=glnS PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.450e-25 Identity = 65/163 (39.88%), Postives = 90/163 (55.21%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPSKKT-------KPKGVLHWV 472 T SI F + IG++++DS + LE+ IRE+L +TAPR M V+NPLK+VITN G L+ + P D+++ V FS +YIE DF K Y+ L PG V L+ A+ +KC EVI D+ + I YDP K+ K KG +HWV Sbjct: 301 TPKSIRNFCKAIGVAKADSTVDYQMLEHFIREDLQETAPRAMAVINPLKLVITNYPEGKSEILEIENNP---KDESAGKRAVTFSREIYIEREDFMENPPKKYFRLFPGNEVRLKGAYFVKCNEVI-KDENGEVTEIHCTYDPETKSGTGFTGRKVKGTIHWV 459
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_CLOPE (Glutaminyl-tRNA synthetase OS=Clostridium perfringens GN=glnS PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.450e-25 Identity = 66/163 (40.49%), Postives = 90/163 (55.21%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPSKKT-------KPKGVLHWV 472 T SI F + IG++++DS + LE+ IRE+L +TAPR M V+NPLK+VITN G L+ + P D+++ V FS VYIE DF K Y+ L PG V L+ A+ +KC EVI D+ + I YDP K+ K KG +HWV Sbjct: 301 TPKSIRNFCKAIGVAKADSTVDSQMLEHFIREDLQETAPRAMAVINPLKLVITNYPEGESEILEIENNP---KDESAGKRAVTFSREVYIEREDFMENPPKKYFRLFPGNEVRLKGAYFVKCNEVI-KDENGEVTEIHCTYDPETKSGTGFTGRKVKGTIHWV 459
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_CLOP1 (Glutaminyl-tRNA synthetase OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=glnS PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.450e-25 Identity = 66/163 (40.49%), Postives = 90/163 (55.21%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPSKKT-------KPKGVLHWV 472 T SI F + IG++++DS + LE+ IRE+L +TAPR M V+NPLK+VITN G L+ + P D+++ V FS VYIE DF K Y+ L PG V L+ A+ +KC EVI D+ + I YDP K+ K KG +HWV Sbjct: 301 TPKSIRNFCKAIGVAKADSTVDSQMLEHFIREDLQETAPRAMAVINPLKLVITNYPEGESEILEIENNP---KDESAGKRAVTFSREVYIEREDFMENPPKKYFRLFPGNEVRLKGAYFVKCNEVI-KDENGEVTEIHCTYDPETKSGTGFTGRKVKGTIHWV 459
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_XANCP (Glutaminyl-tRNA synthetase OS=Xanthomonas campestris pv. campestris GN=glnS PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 6.659e-25 Identity = 54/164 (32.93%), Postives = 86/164 (52.44%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPSKK-------TKPKGVLHWVA 475 T ++ FV +GIS+ +S+I LE +RE+L+ A R M V++PLK+V+TN+ G H + ++ + D++ +VPF+ ++IE DF K + L PG + LR A + EVI D I+ +R DP + K KG +HWV+ Sbjct: 327 TPAAMRLFVDRVGISKQNSVIDFSVLEGCLREDLDAAAARRMAVIDPLKLVLTNLPEG---HTETLQFSNHPKDESFGTREVPFARELWIEREDFAEVPPKGWKRLVPGGEIRLRGAGIARVDEVI-KDAAGEIVELRGWLDPESRPGMIGSNRKVKGTIHWVS 486 HSP 2 Score: 48.9062 bits (115), Expect = 6.659e-25 Identity = 31/78 (39.74%), Postives = 43/78 (55.13%), Query Frame = 3 Query: 510 EVRLFEKLFNSENP---AELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731 E+RL+++LF+ E P +E + LNP+SK + Y EPS AA FQFER G F D +D + FNR+ Sbjct: 494 EIRLYDRLFSVEKPDDESEGKTYRDYLNPESKRSV-RGYVEPSAAQAAPEQAFQFERTGYFVADRRDHSAATPAFNRS 570
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_XANC8 (Glutaminyl-tRNA synthetase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=glnS PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 6.659e-25 Identity = 54/164 (32.93%), Postives = 86/164 (52.44%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPSKK-------TKPKGVLHWVA 475 T ++ FV +GIS+ +S+I LE +RE+L+ A R M V++PLK+V+TN+ G H + ++ + D++ +VPF+ ++IE DF K + L PG + LR A + EVI D I+ +R DP + K KG +HWV+ Sbjct: 327 TPAAMRLFVDRVGISKQNSVIDFSVLEGCLREDLDAAAARRMAVIDPLKLVLTNLPEG---HTETLQFSNHPKDESFGTREVPFARELWIEREDFAEVPPKGWKRLVPGGEIRLRGAGIARVDEVI-KDAAGEIVELRGWLDPESRPGMIGSNRKVKGTIHWVS 486 HSP 2 Score: 48.9062 bits (115), Expect = 6.659e-25 Identity = 31/78 (39.74%), Postives = 43/78 (55.13%), Query Frame = 3 Query: 510 EVRLFEKLFNSENP---AELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731 E+RL+++LF+ E P +E + LNP+SK + Y EPS AA FQFER G F D +D + FNR+ Sbjct: 494 EIRLYDRLFSVEKPDDESEGKTYRDYLNPESKRSV-RGYVEPSAAQAAPEQAFQFERTGYFVADRRDHSAATPAFNRS 570 The following BLAST results are available for this feature:
BLAST of DR908085 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 150
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908085 ID=DR908085; Name=DR908085; organism=Citrus sinensis; type=EST; length=731bpback to top |