DR908085

Overview
NameDR908085
Unique NameDR908085
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length731
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_NOSCE (Probable glutaminyl-tRNA synthetase OS=Nosema ceranae (strain BRL01) GN=NCER_100619 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.463e-24
Identity = 51/155 (32.90%), Postives = 78/155 (50.32%), Query Frame = 2
Query:   14 SINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMK-DSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPSKKTKPKGVLHWVA 475
            +IN FV+ +GI+ ++++I   + E  IR+ELNKT  R M V++PLK+ I N +   I   ++ +             K+ F   +YIE SDF+M+ D KD+    P +SV L     IK    I  D+   I  +  E        PK  +HWV+
Sbjct:  482 AINNFVKSLGITYAETIIDNKKFESFIRDELNKTTQRVMCVMDPLKIYIRNAKEQEISIPNSNQ-------------KIIFKPYIYIEKSDFKMEDDDKDFLRFTPNQSVGLYMFGAIK---FIKFDNDMIIAELTNE-------TPKKFIHWVS 613          

HSP 2 Score: 63.1586 bits (152), Expect = 1.463e-24
Identity = 34/75 (45.33%), Postives = 49/75 (65.33%), Query Frame = 3
Query:  507 VEVRLFEKLFNSENPAELDDWLSDLNPDS-KVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVDKDSTPEKLVFNR 728
            V +RL++ LF S NP E  ++L ++N DS K V+   Y +  +    V D+FQF+R+G F VD D+TPE +VFNR
Sbjct:  619 VTIRLYDPLFRSFNPEE-GNYLDNINLDSLKTVV--GYCDDRIKGCEVEDKFQFQRVGYFCVDPDTTPENIVFNR 690          
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_BUCAT (Glutaminyl-tRNA synthetase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain Tuc7) GN=glnS PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.468e-24
Identity = 56/164 (34.15%), Postives = 91/164 (55.49%), Query Frame = 2
Query:    5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYD------PSKKTKPKGVLHWVAE 478
            T +SI  F Q IG+++ ++LI    LE+ IR+ELN+TA RTM +L+P+K+ + N++S    + +    P+   +     +K+ F+N +YI+ SDF+ K  K Y  L  G+ + LRY++ I   E I  D+   I +I    D        K  K   V+HW++E
Sbjct:  304 TPSSIKNFCQKIGVTKQNNLIEFSMLEHCIRKELNQTAIRTMAILDPIKIFLYNLDSN---YKEEFIVPNHPNNPEMGTHKIIFTNTIYIDRSDFKEKYDKKYKRLKLGEKIRLRYSYIIH-AEKIEKDEYGNISNIICYCDLNTLGRKPKDNKNPAVIHWISE 463          

HSP 2 Score: 42.3578 bits (98), Expect = 1.468e-24
Identity = 28/82 (34.15%), Postives = 46/82 (56.10%), Query Frame = 3
Query:  510 EVRLFEKLFNSENPAELDDWLSDLNPDSKV----VIPEAYAE---PSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731
            E +L+++LFN +NP + +++L  +N  S +     I +   E     + +  +   FQFER+G F +D  DS   +LVFNRT
Sbjct:  470 EFKLYDQLFNIKNPEQQENFLLYINSKSLIKKFGFIEKKIGEEIQKKISNNNIEIFFQFERIGYFCIDFIDSKKNQLVFNRT 551          
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_BUCAI (Glutaminyl-tRNA synthetase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=glnS PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.468e-24
Identity = 56/164 (34.15%), Postives = 91/164 (55.49%), Query Frame = 2
Query:    5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYD------PSKKTKPKGVLHWVAE 478
            T +SI  F Q IG+++ ++LI    LE+ IR+ELN+TA RTM +L+P+K+ + N++S    + +    P+   +     +K+ F+N +YI+ SDF+ K  K Y  L  G+ + LRY++ I   E I  D+   I +I    D        K  K   V+HW++E
Sbjct:  304 TPSSIKNFCQKIGVTKQNNLIEFSMLEHCIRKELNQTAIRTMAILDPIKIFLYNLDSN---YKEEFIVPNHPNNPEMGTHKIIFTNTIYIDRSDFKEKYDKKYKRLKLGEKIRLRYSYIIH-AEKIEKDEYGNISNIICYCDLNTLGRKPKDNKNPAVIHWISE 463          

HSP 2 Score: 42.3578 bits (98), Expect = 1.468e-24
Identity = 28/82 (34.15%), Postives = 46/82 (56.10%), Query Frame = 3
Query:  510 EVRLFEKLFNSENPAELDDWLSDLNPDSKV----VIPEAYAE---PSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731
            E +L+++LFN +NP + +++L  +N  S +     I +   E     + +  +   FQFER+G F +D  DS   +LVFNRT
Sbjct:  470 EFKLYDQLFNIKNPEQQENFLLYINSKSLIKKFGFIEKKIGEEIQKKISNNNIEIFFQFERIGYFCIDFIDSKKNQLVFNRT 551          
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_BUCA5 (Glutaminyl-tRNA synthetase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A) GN=glnS PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.468e-24
Identity = 56/164 (34.15%), Postives = 91/164 (55.49%), Query Frame = 2
Query:    5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYD------PSKKTKPKGVLHWVAE 478
            T +SI  F Q IG+++ ++LI    LE+ IR+ELN+TA RTM +L+P+K+ + N++S    + +    P+   +     +K+ F+N +YI+ SDF+ K  K Y  L  G+ + LRY++ I   E I  D+   I +I    D        K  K   V+HW++E
Sbjct:  304 TPSSIKNFCQKIGVTKQNNLIEFSMLEHCIRKELNQTAIRTMAILDPIKIFLYNLDSN---YKEEFIVPNHPNNPEMGTHKIIFTNTIYIDRSDFKEKYDKKYKRLKLGEKIRLRYSYIIH-AEKIEKDEYGNISNIICYCDLNTLGRKPKDNKNPAVIHWISE 463          

HSP 2 Score: 42.3578 bits (98), Expect = 1.468e-24
Identity = 28/82 (34.15%), Postives = 46/82 (56.10%), Query Frame = 3
Query:  510 EVRLFEKLFNSENPAELDDWLSDLNPDSKV----VIPEAYAE---PSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731
            E +L+++LFN +NP + +++L  +N  S +     I +   E     + +  +   FQFER+G F +D  DS   +LVFNRT
Sbjct:  470 EFKLYDQLFNIKNPEQQENFLLYINSKSLIKKFGFIEKKIGEEIQKKISNNNIEIFFQFERIGYFCIDFIDSKKNQLVFNRT 551          
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_ENCCU (Probable glutaminyl-tRNA synthetase OS=Encephalitozoon cuniculi GN=ECU10_1460 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 7.596e-23
Identity = 51/157 (32.48%), Postives = 79/157 (50.32%), Query Frame = 2
Query:   14 SINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPSKKTKPKGVLHWVAEPS 484
            +IN F + +G + +++ + + +LE  +R+ LN+T+ R M V  PLKV I N    +I   D           +S    VPF+ V+YIE SDF  K  KD+  L P + V L   +PI+  +V      + I+  R +  P K       +HWV+E S
Sbjct:  477 AINQFCRSLGFTFAETTVDVKKLENFVRDNLNRTSRRIMCVKEPLKVTIMNSTPCSISIPD--------LPGSSVVRDVPFTPVIYIEKSDFMEKGDKDFLRLTPEQPVGLYMLYPIRVVKV----TPDGIVAERWDGVPRK------FIHWVSEDS 615          

HSP 2 Score: 54.6842 bits (130), Expect = 7.596e-23
Identity = 29/75 (38.67%), Postives = 45/75 (60.00%), Query Frame = 3
Query:  507 VEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVDKDSTPEKLVFNRT 731
            VE+R++  L+ S +P +   +L ++N DS  V      +  +  A + DRFQF+R+G F VDKD+T E +V N T
Sbjct:  618 VEMRMYSSLWTSFSPKDAT-YLEEMNKDSLKVF-HGLCDKRISDARIEDRFQFQRIGYFCVDKDTTKENIVVNLT 690          
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_SCHPO (Probable glutaminyl-tRNA synthetase OS=Schizosaccharomyces pombe GN=SPBC342.02 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.674e-22
Identity = 52/165 (31.52%), Postives = 85/165 (51.52%), Query Frame = 2
Query:   14 SINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWP-DAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSV-LLRYAFPIKCTEVILSDDKETILHIRAEYDPSKKTKPKGVLHWVAEPSPGVNPL 502
            +I  FV  +G++ + S I + R E  +R+ L  + PR M + +P+KV + N++      ++    P D      SAF     +  +YI+ SDFR + S D++ L  G+ V L R + P+    V+ +D+ E I  I AEYD S   KPK  + WV+      +P+
Sbjct:  540 AILEFVSEVGVTTAVSNIEVARFENCVRKFLENSVPRLMFLPDPIKVTLENLDDSYREQIEIPFNPKDPSMGSRSAF----LTKHIYIDRSDFREEASSDFFRLTLGQPVGLFRASHPVVAKRVVKNDEGEPI-EIIAEYDASSSKKPKTFIQWVSRDKESNSPV 699          

HSP 2 Score: 46.595 bits (109), Expect = 3.674e-22
Identity = 34/96 (35.42%), Postives = 47/96 (48.96%), Query Frame = 3
Query:  510 EVRLFEKLFNSENPAEL--DDWLSDLNPDSKVVIPEAYAEPSLH-------------SAAVGD-------RFQFERLGTFAVDKDS-TPEKLVFNR 728
            E RLF  LF  +NPA L   +  + LNP+S+VV+  +  EP ++             SA V         RFQ  R+G F +D+D+  P  LV NR
Sbjct:  703 ETRLFNNLFKCDNPAALKEQELAAQLNPESEVVLKNSIIEPGIYDLIKSAPWPKTDSSAGVDKAENPESVRFQAMRVGYFCLDEDTKKPNHLVLNR 798          
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_YEAST (Glutaminyl-tRNA synthetase OS=Saccharomyces cerevisiae GN=GLN4 PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 1.122e-20
Identity = 52/170 (30.59%), Postives = 81/170 (47.65%), Query Frame = 2
Query:   14 SINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMK-DSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYD-----PSKKTKPKGVLHWVAEPSPGVNPLR 505
            +I +F+  +G++ S + I++ R E  +R+ L  T PR M VL+P++VV+ N+      + +    P            VPF+N  YIE SDF    D K+++ L P + V L         + +  D+   I+ I   YD      SK  KPK  + WV   S   +PLR
Sbjct:  533 AILSFINTLGVTTSTTNIQVVRFESAVRKYLEDTTPRLMFVLDPVEVVVDNLSDD---YEELATIPYRPGTPEFGERTVPFTNKFYIERSDFSENVDDKEFFRLTPNQPVGLIKVSHTVSFKSLEKDEAGKIIRIHVNYDNKVEEGSKPKKPKTYIQWVPISSKYNSPLR 699          

HSP 2 Score: 48.1358 bits (113), Expect = 1.122e-20
Identity = 33/98 (33.67%), Postives = 50/98 (51.02%), Query Frame = 3
Query:  510 EVRLFEKLFNSENPAELDD-WLSDLNPDSKVVIPEAYAEPSL-----HSAAVGD-------------------RFQFERLGTFAVDKDSTPEKLVFNR 728
            E R++ +LF SENP+   + +L D+NP+S+VV  E+  E +      +S  V D                   RFQ  R+G F +DK+ST  K++ NR
Sbjct:  702 ETRVYNQLFKSENPSSHPEGFLKDINPESEVVYKESVMEHNFGDVVKNSPWVVDSVKNSEFYVEEDKDSKEVCRFQAMRVGYFTLDKESTTSKVILNR 799          
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_BUCBP (Glutaminyl-tRNA synthetase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=glnS PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.208e-16
Identity = 56/164 (34.15%), Postives = 85/164 (51.83%), Query Frame = 2
Query:    5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPS------KKTKPKGVLHWVAE 478
            T +SI  F + IGI++ ++ I+L  LE  IR +LN  APR M V++P+K+ I N+      + +    P+         +K  FSN +YI+ +DF    S+    LA GK + LRY++ IK  + I  D    I  I   YD +      K  K  GV+HW++E
Sbjct:  303 TPSSIKLFCKKIGITKQENTIQLSFLESCIRSDLNPIAPRYMAVIHPIKIQICNLSDN---YEEILNIPNHPTKPNMGCHKSIFSNTLYIDQNDFYENKSELLKKLAIGKEIRLRYSYVIKAHK-IKKDQNNNIKTIFCTYDKNTLGKNPKNRKILGVIHWISE 462          
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_ENTBH (Probable glutaminyl-tRNA synthetase OS=Enterocytozoon bieneusi (strain H348) GN=EBI_22570 PE=3 SV=1)

HSP 1 Score: 52.373 bits (124), Expect = 9.485e-15
Identity = 40/155 (25.81%), Postives = 72/155 (46.45%), Query Frame = 2
Query:    8 STSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPSKKTKPKGVLHWV 472
            +++IN FVQ +GI+ S+++I +  LE  + +EL + A +   ++NPLKV I    +G I +                   V  +N++YI+  DF   ++ D+  L   + V L     +K     + D+ +    IR E     + KP   + W+
Sbjct:  470 ASAINKFVQSVGITFSETIIDVKILESFVLKELMQIAKKATCIINPLKVYINKCTTGIISN-----------------EPVDVNNIIYIDKDDFDETNNSDFLRLTKIQPVGLINLGVLK----YIKDESD---GIRCELLTVDECKPNKFIQWL 600          

HSP 2 Score: 48.521 bits (114), Expect = 9.485e-15
Identity = 27/79 (34.18%), Postives = 49/79 (62.03%), Query Frame = 3
Query:  507 VEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVDKDS----TPEKLVFNRT 731
            VE+R+++ LF S +P E+  +++D++  + + I + Y + ++ +  + D+FQF R+G F  D DS      +KLVFN T
Sbjct:  607 VELRMYKPLFKSFDPDEIG-YMNDIDLTNSLEIIDGYVDNTVLNTHIEDKFQFIRIGFFCCDFDSIINDNQKKLVFNLT 684          
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_DEIRA (Glutaminyl-tRNA synthetase OS=Deinococcus radiodurans GN=glnS PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.032e-14
Identity = 55/174 (31.61%), Postives = 84/174 (48.28%), Query Frame = 2
Query:    2 VTSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDA----------------SAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPSKKTKPKGVLHWVA 475
            VT  ++ AF   IG+SR++  + +   E  +R++LN  APR M VL+P+KV +TN++    + L    WP     D+                 A   VP +  +YIE  DF     K +  L PG +V LR A  I+  +   +D+   + HIRA     +  K  GV+HWV+
Sbjct:  342 VTPEAVRAFAAQIGVSRTNRTVDIAVYENAVRDDLNHRAPRVMAVLDPVKVTLTNLDGEKTLSL--PYWPHDVVRDSPDGLVGMPGGGRVAPEEAVRDVPLTRELYIERDDFSPAPPKGFKRLTPGGTVRLRGAGIIRADD-FGTDEAGQVTHIRATL-LGEDAKAAGVIHWVS 511          
The following BLAST results are available for this feature:
BLAST of DR908085 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 150
Match NameE-valueIdentityDescription
SYQ_NOSCE1.463e-2432.90Probable glutaminyl-tRNA synthetase OS=Nosema cera... [more]
SYQ_BUCAT1.468e-2434.15Glutaminyl-tRNA synthetase OS=Buchnera aphidicola ... [more]
SYQ_BUCAI1.468e-2434.15Glutaminyl-tRNA synthetase OS=Buchnera aphidicola ... [more]
SYQ_BUCA51.468e-2434.15Glutaminyl-tRNA synthetase OS=Buchnera aphidicola ... [more]
SYQ_ENCCU7.596e-2332.48Probable glutaminyl-tRNA synthetase OS=Encephalito... [more]
SYQ_SCHPO3.674e-2231.52Probable glutaminyl-tRNA synthetase OS=Schizosacch... [more]
SYQ_YEAST1.122e-2030.59Glutaminyl-tRNA synthetase OS=Saccharomyces cerevi... [more]
SYQ_BUCBP3.208e-1634.15Glutaminyl-tRNA synthetase OS=Buchnera aphidicola ... [more]
SYQ_ENTBH9.485e-1525.81Probable glutaminyl-tRNA synthetase OS=Enterocytoz... [more]
SYQ_DEIRA1.032e-1431.61Glutaminyl-tRNA synthetase OS=Deinococcus radiodur... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16213 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-25_B12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908085 ID=DR908085; Name=DR908085; organism=Citrus sinensis; type=EST; length=731bp
TGTGACTTCAACTTCTATTAATGCTTTTGTTCAAGGGATTGGAATCTCAC
GAAGTGATAGTCTAATTCGTTTGGATCGCCTGGAGTATCATATAAGAGAG
GAACTAAACAAAACAGCACCTCGCACAATGGTTGTGTTGAATCCTCTCAA
GGTGGTTATTACTAACATGGAATCTGGCACAATTATGCATCTTGACGCCA
AAAGATGGCCTGATGCTCAAGCAGATGATGCATCAGCTTTCTACAAGGTT
CCCTTTTCAAACGTTGTGTACATTGAGCATTCTGATTTTCGAATGAAAGA
TTCAAAAGATTATTATGGCCTTGCTCCTGGTAAATCTGTCCTACTCAGAT
ATGCATTCCCTATAAAGTGCACGGAAGTGATTTTATCTGATGATAAAGAA
ACCATTCTTCACATCCGGGCTGAATATGATCCTTCCAAAAAGACAAAACC
AAAGGGAGTTCTTCACTGGGTTGCTGAGCCTTCCCCTGGTGTCAATCCAC
TAAGGGGTGGAAGTCAGATTGTTTGAAAAATTGTTCAACTCTGAGAATCC
TGCAGAACTTGATGATTGGCTTTCTGATTTGAATCCGGATTCCAAAGTGG
TGATTCCTGAAGCATATGCAGAACCATCACTTCACAGTGCTGCTGTCGGG
GACAGATTCCAATTTGAAAGGCTAGGGACTTTTGCAGTTGATAAGGATTC
CACTCCGGAGAAACTTGTTTTCAACCGGACA
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