DR908085
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_SALEP (Glutaminyl-tRNA synthetase OS=Salmonella enteritidis PT4 (strain P125109) GN=glnS PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.457e-35 Identity = 60/164 (36.59%), Postives = 88/164 (53.66%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEY-------DPSKKTKPKGVLHWVA 475 T+ SI F + IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N G + P+ +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E + D + I I Y DP+ K KGV+HWV+ Sbjct: 303 TAASIREFCKRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYPQG---ESEMVTMPNHPNKPEMGSREVPFSGEIWIDRADFREEANKQYKRLVMGKEVRLRNAYVIK-AERVEKDAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS 462 HSP 2 Score: 75.485 bits (184), Expect = 1.457e-35 Identity = 38/76 (50.00%), Postives = 55/76 (72.37%), Query Frame = 3 Query: 507 VEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731 +E+RL+++LF+ NP +D+LS +NP+S +VI + Y EPSL +A G FQFER G F +D + +T +KLVFNRT Sbjct: 469 IEIRLYDRLFSVPNPGAAEDFLSVINPES-LVIKQGYGEPSLKAAVAGKAFQFEREGYFCLDSRYATADKLVFNRT 543
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_SALDC (Glutaminyl-tRNA synthetase OS=Salmonella dublin (strain CT_02021853) GN=glnS PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.457e-35 Identity = 60/164 (36.59%), Postives = 88/164 (53.66%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEY-------DPSKKTKPKGVLHWVA 475 T+ SI F + IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N G + P+ +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E + D + I I Y DP+ K KGV+HWV+ Sbjct: 303 TAASIREFCKRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYPQG---ESEMVTMPNHPNKPEMGSREVPFSGEIWIDRADFREEANKQYKRLVMGKEVRLRNAYVIK-AERVEKDAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS 462 HSP 2 Score: 75.485 bits (184), Expect = 1.457e-35 Identity = 38/76 (50.00%), Postives = 55/76 (72.37%), Query Frame = 3 Query: 507 VEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731 +E+RL+++LF+ NP +D+LS +NP+S +VI + Y EPSL +A G FQFER G F +D + +T +KLVFNRT Sbjct: 469 IEIRLYDRLFSVPNPGAAEDFLSVINPES-LVIKQGYGEPSLKAAVAGKAFQFEREGYFCLDSRYATADKLVFNRT 543
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_SALA4 (Glutaminyl-tRNA synthetase OS=Salmonella agona (strain SL483) GN=glnS PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.457e-35 Identity = 60/164 (36.59%), Postives = 88/164 (53.66%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEY-------DPSKKTKPKGVLHWVA 475 T+ SI F + IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N G + P+ +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E + D + I I Y DP+ K KGV+HWV+ Sbjct: 303 TAASIREFCKRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYPQG---ESEMVTMPNHPNKPEMGSREVPFSGEIWIDRADFREEANKQYKRLVMGKEVRLRNAYVIK-AERVEKDAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS 462 HSP 2 Score: 75.485 bits (184), Expect = 1.457e-35 Identity = 38/76 (50.00%), Postives = 55/76 (72.37%), Query Frame = 3 Query: 507 VEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731 +E+RL+++LF+ NP +D+LS +NP+S +VI + Y EPSL +A G FQFER G F +D + +T +KLVFNRT Sbjct: 469 IEIRLYDRLFSVPNPGAAEDFLSVINPES-LVIKQGYGEPSLKAAVAGKAFQFEREGYFCLDSRYATADKLVFNRT 543
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_ALISL (Glutaminyl-tRNA synthetase OS=Aliivibrio salmonicida (strain LFI1238) GN=glnS PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.457e-35 Identity = 62/164 (37.80%), Postives = 88/164 (53.66%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYD-------PSKKTKPKGVLHWVA 475 T+ SI F + IG+++ +++I LE IR++LN+ APR M VL P+KVVI N E G + L+ P+ +VPF+ +YIE DFR + +K Y L GK V LR A+ I+ I D+ I I YD P+ K KGV+HWV+ Sbjct: 303 TAGSIREFCKRIGVTKQENMIEFGSLESCIRDDLNENAPRAMAVLEPVKVVIENYEEGKVETLNVANHPN---KPEMGTREVPFTREIYIEQDDFREEANKKYKRLVLGKEVRLRGAYVIQANR-IEKDEAGNITTIFCSYDTETLGKNPADGRKVKGVIHWVS 462 HSP 2 Score: 70.8626 bits (172), Expect = 1.457e-35 Identity = 36/75 (48.00%), Postives = 51/75 (68.00%), Query Frame = 3 Query: 510 EVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731 E+RL+++LF N A L+D+ +NP+S ++ + + EPSL +A +QFER G F +D KDSTPE LVFNRT Sbjct: 470 EIRLYDRLFTVPNSAALEDFSESINPES-LITKQGFVEPSLVTAEAEAGYQFERTGYFCIDNKDSTPEALVFNRT 543
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_VIBHB (Glutaminyl-tRNA synthetase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=glnS PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 1.898e-35 Identity = 64/164 (39.02%), Postives = 89/164 (54.27%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYD-------PSKKTKPKGVLHWVA 475 TS SI F + IG+++ +++I LE IR++LN+ APR M VL+P+K+VI N E G + L P+ +VPF+ V+IE DFR + +K Y L GK V LR A+ IK E I D + I I YD P+ K KGV+HWV+ Sbjct: 303 TSASIREFCKRIGVTKQENMIEFGSLESCIRDDLNENAPRAMAVLDPVKIVIENFEEGAVETLTVANHPN---KPEMGEREVPFTREVWIEREDFREEANKKYKRLVLGKEVRLRGAYVIK-AERIEKDAEGNITTIFCTYDAETLGKNPADGRKVKGVIHWVS 462 HSP 2 Score: 69.3218 bits (168), Expect = 1.898e-35 Identity = 34/75 (45.33%), Postives = 51/75 (68.00%), Query Frame = 3 Query: 510 EVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731 E+RL+++LF NPA DD+ + +NP+S V++ + EPSL ++ +QFER+G F D KDS+ + LVFNRT Sbjct: 470 EIRLYDRLFTVPNPAAADDFAATINPESLVIL-NGFVEPSLAASEAEKGYQFERMGYFCADSKDSSADNLVFNRT 543
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_PSEMY (Glutaminyl-tRNA synthetase OS=Pseudomonas mendocina (strain ymp) GN=glnS PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.898e-35 Identity = 60/162 (37.04%), Postives = 84/162 (51.85%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPS------KKTKPKGVLHWV 472 T SI AF IG++R+ ++ + LE+ IRE+L+ A R M VL PLKVVITN G + +L+ R P +PFS +YI+ SDF + L PG V LR ++ I+ E I D I+ +R YD + + K KGV+HWV Sbjct: 304 TPASIRAFCDMIGVNRAGGVVDIGMLEFAIREDLDANAARAMCVLKPLKVVITNYPEGKVENLELPRHPKQD----MGVRVLPFSREIYIDASDFEETPPDGFKRLIPGGEVRLRGSYVIRADEAI-KDAAGNIVELRCSYDENTLGKNPEGRKVKGVIHWV 460 HSP 2 Score: 74.3294 bits (181), Expect = 1.898e-35 Identity = 42/78 (53.85%), Postives = 53/78 (67.95%), Query Frame = 3 Query: 510 EVRLFEKLFNSENPAELDD---WLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731 EVRL+++LF S NP + ++ +L ++NPDS VV+ AEPSL AA +RFQFER G F D KDS P K VFNRT Sbjct: 469 EVRLYDRLFRSANPEKSEEGGSFLDNINPDSLVVLTGCRAEPSLAQAAPEERFQFEREGYFVADLKDSQPGKPVFNRT 546
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_SALPB (Glutaminyl-tRNA synthetase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=glnS PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.898e-35 Identity = 60/164 (36.59%), Postives = 89/164 (54.27%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEY-------DPSKKTKPKGVLHWVA 475 T+ SI F + IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N G + P+ + +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E + D + I I Y DP+ K KGV+HWV+ Sbjct: 303 TAASIREFCKRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYPQGESEMVTMPNHPNKLEMGSR---EVPFSGEIWIDRADFREEANKQYKRLVMGKEVRLRNAYVIK-AERVEKDAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS 462 HSP 2 Score: 75.485 bits (184), Expect = 1.898e-35 Identity = 38/76 (50.00%), Postives = 55/76 (72.37%), Query Frame = 3 Query: 507 VEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731 +E+RL+++LF+ NP +D+LS +NP+S +VI + Y EPSL +A G FQFER G F +D + +T +KLVFNRT Sbjct: 469 IEIRLYDRLFSVPNPGAAEDFLSVINPES-LVIKQGYGEPSLKAAVAGKAFQFEREGYFCLDSRYATADKLVFNRT 543
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_SHISS (Glutaminyl-tRNA synthetase OS=Shigella sonnei (strain Ss046) GN=glnS PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.898e-35 Identity = 60/164 (36.59%), Postives = 88/164 (53.66%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEY-------DPSKKTKPKGVLHWVA 475 T+ SI F + IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N + M P+ +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E + D + I I Y DP+ K KGV+HWV+ Sbjct: 303 TAASIREFCKRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEM----VTMPNHPNKPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIK-AERVEKDAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS 461 HSP 2 Score: 77.411 bits (189), Expect = 1.898e-35 Identity = 41/76 (53.95%), Postives = 54/76 (71.05%), Query Frame = 3 Query: 507 VEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731 VE+RL+++LF+ NP DD+LS +NP+S +VI + +AEPSL A G FQFER G F +D + ST EK VFNRT Sbjct: 468 VEIRLYDRLFSVPNPGAADDFLSVINPES-LVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPVFNRT 542
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_SHIFL (Glutaminyl-tRNA synthetase OS=Shigella flexneri GN=glnS PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.898e-35 Identity = 60/164 (36.59%), Postives = 88/164 (53.66%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEY-------DPSKKTKPKGVLHWVA 475 T+ SI F + IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N + M P+ +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E + D + I I Y DP+ K KGV+HWV+ Sbjct: 303 TAASIREFCKRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEM----VTMPNHPNKPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIK-AERVEKDAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS 461 HSP 2 Score: 77.411 bits (189), Expect = 1.898e-35 Identity = 41/76 (53.95%), Postives = 54/76 (71.05%), Query Frame = 3 Query: 507 VEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731 VE+RL+++LF+ NP DD+LS +NP+S +VI + +AEPSL A G FQFER G F +D + ST EK VFNRT Sbjct: 468 VEIRLYDRLFSVPNPGAADDFLSVINPES-LVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPVFNRT 542
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_SHIF8 (Glutaminyl-tRNA synthetase OS=Shigella flexneri serotype 5b (strain 8401) GN=glnS PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.898e-35 Identity = 60/164 (36.59%), Postives = 88/164 (53.66%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEY-------DPSKKTKPKGVLHWVA 475 T+ SI F + IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N + M P+ +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E + D + I I Y DP+ K KGV+HWV+ Sbjct: 303 TAASIREFCKRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEM----VTMPNHPNKPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIK-AERVEKDAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS 461 HSP 2 Score: 77.411 bits (189), Expect = 1.898e-35 Identity = 41/76 (53.95%), Postives = 54/76 (71.05%), Query Frame = 3 Query: 507 VEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731 VE+RL+++LF+ NP DD+LS +NP+S +VI + +AEPSL A G FQFER G F +D + ST EK VFNRT Sbjct: 468 VEIRLYDRLFSVPNPGAADDFLSVINPES-LVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPVFNRT 542 The following BLAST results are available for this feature:
BLAST of DR908085 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 150
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908085 ID=DR908085; Name=DR908085; organism=Citrus sinensis; type=EST; length=731bpback to top |