DR908085
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_ECOL5 (Glutaminyl-tRNA synthetase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=glnS PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.898e-35 Identity = 60/164 (36.59%), Postives = 88/164 (53.66%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEY-------DPSKKTKPKGVLHWVA 475 T+ SI F + IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N + M P+ +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E + D + I I Y DP+ K KGV+HWV+ Sbjct: 303 TAASIREFCKRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEM----VTMPNHPNKPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIK-AERVEKDAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS 461 HSP 2 Score: 77.411 bits (189), Expect = 1.898e-35 Identity = 41/76 (53.95%), Postives = 54/76 (71.05%), Query Frame = 3 Query: 507 VEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731 VE+RL+++LF+ NP DD+LS +NP+S +VI + +AEPSL A G FQFER G F +D + ST EK VFNRT Sbjct: 468 VEIRLYDRLFSVPNPGAADDFLSVINPES-LVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPVFNRT 542
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_ECOK1 (Glutaminyl-tRNA synthetase OS=Escherichia coli O1:K1 / APEC GN=glnS PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.898e-35 Identity = 60/164 (36.59%), Postives = 88/164 (53.66%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEY-------DPSKKTKPKGVLHWVA 475 T+ SI F + IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N + M P+ +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E + D + I I Y DP+ K KGV+HWV+ Sbjct: 303 TAASIREFCKRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEM----VTMPNHPNKPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIK-AERVEKDAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS 461 HSP 2 Score: 77.411 bits (189), Expect = 1.898e-35 Identity = 41/76 (53.95%), Postives = 54/76 (71.05%), Query Frame = 3 Query: 507 VEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731 VE+RL+++LF+ NP DD+LS +NP+S +VI + +AEPSL A G FQFER G F +D + ST EK VFNRT Sbjct: 468 VEIRLYDRLFSVPNPGAADDFLSVINPES-LVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPVFNRT 542
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_ECOHS (Glutaminyl-tRNA synthetase OS=Escherichia coli O9:H4 (strain HS) GN=glnS PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.898e-35 Identity = 60/164 (36.59%), Postives = 88/164 (53.66%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEY-------DPSKKTKPKGVLHWVA 475 T+ SI F + IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N + M P+ +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E + D + I I Y DP+ K KGV+HWV+ Sbjct: 303 TAASIREFCKRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEM----VTMPNHPNKPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIK-AERVEKDAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS 461 HSP 2 Score: 77.411 bits (189), Expect = 1.898e-35 Identity = 41/76 (53.95%), Postives = 54/76 (71.05%), Query Frame = 3 Query: 507 VEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731 VE+RL+++LF+ NP DD+LS +NP+S +VI + +AEPSL A G FQFER G F +D + ST EK VFNRT Sbjct: 468 VEIRLYDRLFSVPNPGAADDFLSVINPES-LVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPVFNRT 542
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_ECODH (Glutaminyl-tRNA synthetase OS=Escherichia coli (strain K12 / DH10B) GN=glnS PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.898e-35 Identity = 60/164 (36.59%), Postives = 88/164 (53.66%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEY-------DPSKKTKPKGVLHWVA 475 T+ SI F + IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N + M P+ +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E + D + I I Y DP+ K KGV+HWV+ Sbjct: 303 TAASIREFCKRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEM----VTMPNHPNKPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIK-AERVEKDAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS 461 HSP 2 Score: 77.411 bits (189), Expect = 1.898e-35 Identity = 41/76 (53.95%), Postives = 54/76 (71.05%), Query Frame = 3 Query: 507 VEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731 VE+RL+++LF+ NP DD+LS +NP+S +VI + +AEPSL A G FQFER G F +D + ST EK VFNRT Sbjct: 468 VEIRLYDRLFSVPNPGAADDFLSVINPES-LVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPVFNRT 542
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_ECOBW (Glutaminyl-tRNA synthetase OS=Escherichia coli (strain K12 / BW2952) GN=glnS PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.898e-35 Identity = 60/164 (36.59%), Postives = 88/164 (53.66%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEY-------DPSKKTKPKGVLHWVA 475 T+ SI F + IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N + M P+ +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E + D + I I Y DP+ K KGV+HWV+ Sbjct: 303 TAASIREFCKRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEM----VTMPNHPNKPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIK-AERVEKDAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS 461 HSP 2 Score: 77.411 bits (189), Expect = 1.898e-35 Identity = 41/76 (53.95%), Postives = 54/76 (71.05%), Query Frame = 3 Query: 507 VEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731 VE+RL+++LF+ NP DD+LS +NP+S +VI + +AEPSL A G FQFER G F +D + ST EK VFNRT Sbjct: 468 VEIRLYDRLFSVPNPGAADDFLSVINPES-LVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPVFNRT 542
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_ECO8A (Glutaminyl-tRNA synthetase OS=Escherichia coli O8 (strain IAI1) GN=glnS PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.898e-35 Identity = 60/164 (36.59%), Postives = 88/164 (53.66%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEY-------DPSKKTKPKGVLHWVA 475 T+ SI F + IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N + M P+ +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E + D + I I Y DP+ K KGV+HWV+ Sbjct: 303 TAASIREFCKRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEM----VTMPNHPNKPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIK-AERVEKDAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS 461 HSP 2 Score: 77.411 bits (189), Expect = 1.898e-35 Identity = 41/76 (53.95%), Postives = 54/76 (71.05%), Query Frame = 3 Query: 507 VEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731 VE+RL+++LF+ NP DD+LS +NP+S +VI + +AEPSL A G FQFER G F +D + ST EK VFNRT Sbjct: 468 VEIRLYDRLFSVPNPGAADDFLSVINPES-LVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPVFNRT 542
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_ECO81 (Glutaminyl-tRNA synthetase OS=Escherichia coli O81 (strain ED1a) GN=glnS PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.898e-35 Identity = 60/164 (36.59%), Postives = 88/164 (53.66%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEY-------DPSKKTKPKGVLHWVA 475 T+ SI F + IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N + M P+ +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E + D + I I Y DP+ K KGV+HWV+ Sbjct: 303 TAASIREFCKRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEM----VTMPNHPNKPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIK-AERVEKDAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS 461 HSP 2 Score: 77.411 bits (189), Expect = 1.898e-35 Identity = 41/76 (53.95%), Postives = 54/76 (71.05%), Query Frame = 3 Query: 507 VEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731 VE+RL+++LF+ NP DD+LS +NP+S +VI + +AEPSL A G FQFER G F +D + ST EK VFNRT Sbjct: 468 VEIRLYDRLFSVPNPGAADDFLSVINPES-LVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPVFNRT 542
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_ECO55 (Glutaminyl-tRNA synthetase OS=Escherichia coli (strain 55989 / EAEC) GN=glnS PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.898e-35 Identity = 60/164 (36.59%), Postives = 88/164 (53.66%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEY-------DPSKKTKPKGVLHWVA 475 T+ SI F + IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N + M P+ +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E + D + I I Y DP+ K KGV+HWV+ Sbjct: 303 TAASIREFCKRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEM----VTMPNHPNKPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIK-AERVEKDAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS 461 HSP 2 Score: 77.411 bits (189), Expect = 1.898e-35 Identity = 41/76 (53.95%), Postives = 54/76 (71.05%), Query Frame = 3 Query: 507 VEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731 VE+RL+++LF+ NP DD+LS +NP+S +VI + +AEPSL A G FQFER G F +D + ST EK VFNRT Sbjct: 468 VEIRLYDRLFSVPNPGAADDFLSVINPES-LVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPVFNRT 542
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_ECO45 (Glutaminyl-tRNA synthetase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=glnS PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.898e-35 Identity = 60/164 (36.59%), Postives = 88/164 (53.66%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEY-------DPSKKTKPKGVLHWVA 475 T+ SI F + IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N + M P+ +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E + D + I I Y DP+ K KGV+HWV+ Sbjct: 303 TAASIREFCKRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEM----VTMPNHPNKPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIK-AERVEKDAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS 461 HSP 2 Score: 77.411 bits (189), Expect = 1.898e-35 Identity = 41/76 (53.95%), Postives = 54/76 (71.05%), Query Frame = 3 Query: 507 VEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731 VE+RL+++LF+ NP DD+LS +NP+S +VI + +AEPSL A G FQFER G F +D + ST EK VFNRT Sbjct: 468 VEIRLYDRLFSVPNPGAADDFLSVINPES-LVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPVFNRT 542
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_ECO27 (Glutaminyl-tRNA synthetase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=glnS PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.898e-35 Identity = 60/164 (36.59%), Postives = 88/164 (53.66%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEY-------DPSKKTKPKGVLHWVA 475 T+ SI F + IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N + M P+ +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E + D + I I Y DP+ K KGV+HWV+ Sbjct: 303 TAASIREFCKRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEM----VTMPNHPNKPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIK-AERVEKDAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS 461 HSP 2 Score: 77.411 bits (189), Expect = 1.898e-35 Identity = 41/76 (53.95%), Postives = 54/76 (71.05%), Query Frame = 3 Query: 507 VEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731 VE+RL+++LF+ NP DD+LS +NP+S +VI + +AEPSL A G FQFER G F +D + ST EK VFNRT Sbjct: 468 VEIRLYDRLFSVPNPGAADDFLSVINPES-LVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPVFNRT 542 The following BLAST results are available for this feature:
BLAST of DR908085 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 150
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908085 ID=DR908085; Name=DR908085; organism=Citrus sinensis; type=EST; length=731bpback to top |