DR908085
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_ECO24 (Glutaminyl-tRNA synthetase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=glnS PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.898e-35 Identity = 60/164 (36.59%), Postives = 88/164 (53.66%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEY-------DPSKKTKPKGVLHWVA 475 T+ SI F + IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N + M P+ +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E + D + I I Y DP+ K KGV+HWV+ Sbjct: 303 TAASIREFCKRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEM----VTMPNHPNKPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIK-AERVEKDAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS 461 HSP 2 Score: 77.411 bits (189), Expect = 1.898e-35 Identity = 41/76 (53.95%), Postives = 54/76 (71.05%), Query Frame = 3 Query: 507 VEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731 VE+RL+++LF+ NP DD+LS +NP+S +VI + +AEPSL A G FQFER G F +D + ST EK VFNRT Sbjct: 468 VEIRLYDRLFSVPNPGAADDFLSVINPES-LVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPVFNRT 542
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_ENT38 (Glutaminyl-tRNA synthetase OS=Enterobacter sp. (strain 638) GN=glnS PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 2.472e-35 Identity = 59/164 (35.98%), Postives = 91/164 (55.49%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEY-------DPSKKTKPKGVLHWVA 475 +++SI F++ IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N G + P+ + +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E + D + I I Y DP+ K KGV+HWV+ Sbjct: 303 SASSIREFIKRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYPQG---ESELVTMPNHPSKPEMGSREVPFSAEIWIDRADFREEANKQYKRLVMGKEVRLRNAYVIK-AERVEKDTEGNITTIFCSYDAETLSKDPADGRKVKGVIHWVS 462 HSP 2 Score: 73.1738 bits (178), Expect = 2.472e-35 Identity = 37/76 (48.68%), Postives = 55/76 (72.37%), Query Frame = 3 Query: 507 VEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731 VE+RL+++LF+ NP +D+L+ +NP+S ++I + YAEPSL +A G +QFER G F +D + +T KLVFNRT Sbjct: 469 VEIRLYDRLFSVPNPGAAEDFLATINPES-LLIKQGYAEPSLKNAETGKAYQFEREGYFCLDSRYATATKLVFNRT 543
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_SALNS (Glutaminyl-tRNA synthetase OS=Salmonella newport (strain SL254) GN=glnS PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.472e-35 Identity = 60/164 (36.59%), Postives = 88/164 (53.66%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEY-------DPSKKTKPKGVLHWVA 475 T+ SI F + IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N G + P+ +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E + D + I I Y DP+ K KGV+HWV+ Sbjct: 303 TAASIREFCKRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYPQG---ESEMVTMPNHPNKPEMGSREVPFSGEIWIDRADFREEANKQYKRLVMGKEVRLRNAYVIK-AERVEKDAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS 462 HSP 2 Score: 74.7146 bits (182), Expect = 2.472e-35 Identity = 38/76 (50.00%), Postives = 54/76 (71.05%), Query Frame = 3 Query: 507 VEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731 +E+RL+++LF+ NP +D+LS +NP+S +VI Y EPSL +A G FQFER G F +D + +T +KLVFNRT Sbjct: 469 IEIRLYDRLFSVPNPGAAEDFLSVINPES-LVIKRGYGEPSLKAAVAGKAFQFEREGYFCLDSRYATADKLVFNRT 543
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_SALCH (Glutaminyl-tRNA synthetase OS=Salmonella choleraesuis GN=glnS PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.472e-35 Identity = 60/164 (36.59%), Postives = 88/164 (53.66%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEY-------DPSKKTKPKGVLHWVA 475 T+ SI F + IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N G + P+ +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E + D + I I Y DP+ K KGV+HWV+ Sbjct: 303 TAASIREFCKRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYPQG---ESEMVTMPNHPNKPEMGSREVPFSGEIWIDRADFREEANKQYKRLVMGKEVRLRNAYVIK-AERVEKDAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS 462 HSP 2 Score: 74.7146 bits (182), Expect = 2.472e-35 Identity = 38/76 (50.00%), Postives = 54/76 (71.05%), Query Frame = 3 Query: 507 VEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVDK-DSTPEKLVFNRT 731 +E+RL+++LF+ NP +D+LS +NP+S +VI + Y EPSL +A G FQFER G F +D +T +KLVFNRT Sbjct: 469 IEIRLYDRLFSVPNPGTAEDFLSVINPES-LVIKQGYGEPSLKAAVAGKAFQFEREGYFCLDSCYATADKLVFNRT 543
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_ECO7I (Glutaminyl-tRNA synthetase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=glnS PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.472e-35 Identity = 60/164 (36.59%), Postives = 88/164 (53.66%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEY-------DPSKKTKPKGVLHWVA 475 T+ SI F + IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N + M P+ +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E + D + I I Y DP+ K KGV+HWV+ Sbjct: 303 TAASIREFCKRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEM----VTMPNHPNKPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIK-AERVEKDAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS 461 HSP 2 Score: 77.0258 bits (188), Expect = 2.472e-35 Identity = 40/76 (52.63%), Postives = 54/76 (71.05%), Query Frame = 3 Query: 507 VEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731 +E+RL+++LF+ NP DD+LS +NP+S +VI + +AEPSL A G FQFER G F +D + ST EK VFNRT Sbjct: 468 IEIRLYDRLFSVPNPGAADDFLSVINPES-LVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPVFNRT 542
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_VIBSL (Glutaminyl-tRNA synthetase OS=Vibrio splendidus (strain LGP32) GN=glnS PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 3.220e-35 Identity = 64/164 (39.02%), Postives = 91/164 (55.49%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYD-------PSKKTKPKGVLHWVA 475 TS+SI F + IG+++ +++I LE IR++LN+ APR M VL+P+KVVI N ++ T+ L P+ +VPF+ V+IE DFR + +K Y L GK V LR A+ IK E I D + I I YD P+ K KGV+HWV+ Sbjct: 303 TSSSIREFCKRIGVTKQENMIEFGSLESCIRDDLNENAPRAMAVLDPIKVVIENYDADTVETLTVANHPN---KPEMGTREVPFTREVWIERDDFREEANKKYKRLVLGKEVRLRGAYVIK-AERIEKDAEGNITTIFCSYDNETLGKNPADGRKVKGVIHWVS 462 HSP 2 Score: 68.5514 bits (166), Expect = 3.220e-35 Identity = 36/75 (48.00%), Postives = 47/75 (62.67%), Query Frame = 3 Query: 510 EVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731 E+RL+++LF NPA DD+ + LNP+S V + + EPSL +QFER G F VD KDS + LVFNRT Sbjct: 470 EIRLYDRLFTVPNPAAADDFAATLNPESLVTL-NGFVEPSLAEGVAEQAYQFERTGYFCVDSKDSKADALVFNRT 543
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_CITK8 (Glutaminyl-tRNA synthetase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=glnS PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.194e-35 Identity = 59/164 (35.98%), Postives = 88/164 (53.66%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEY-------DPSKKTKPKGVLHWVA 475 T+ SI F + IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N G + P+ +VPFS ++I+ +DFR + +K Y L GK V LR A+ +K E + D + I I Y DP+ K KGV+HWV+ Sbjct: 303 TAASIREFCKRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYPQG---ESEMVTMPNHPNKPEMGSREVPFSGEIWIDRADFREEANKQYKRLVMGKEVRLRNAYVVK-AERVEKDAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS 462 HSP 2 Score: 74.3294 bits (181), Expect = 4.194e-35 Identity = 38/76 (50.00%), Postives = 55/76 (72.37%), Query Frame = 3 Query: 507 VEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731 VE+RL+++LF+ NP +D+LS +NP+S +VI + YAEPSL +A G +QFER G F +D + +T +K VFNRT Sbjct: 469 VEIRLYDRLFSVPNPGAAEDFLSVINPES-LVIKQGYAEPSLQNAVAGKAYQFEREGYFCLDSRYTTADKRVFNRT 543
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_SERP5 (Glutaminyl-tRNA synthetase OS=Serratia proteamaculans (strain 568) GN=glnS PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 4.195e-35 Identity = 65/164 (39.63%), Postives = 92/164 (56.10%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPSKKTKP-------KGVLHWVA 475 T+ SI F Q IG+++ D+ + + LE IREELN+ APR M VL+P+KVVI N+ +G ++ P+ + +VPFS +YI+ +DFR + +K Y L GK V LR A+ IK E I D + I I YDP +K KGV+HWV+ Sbjct: 303 TAASIREFCQRIGVTKQDNNVEMMALEACIREELNENAPRAMAVLDPVKVVIENLTTG----VEMVTMPNHPSKPEMGSREVPFSRDIYIDRADFREEANKQYKRLVLGKEVRLRNAYVIK-AERIEKDAEGEITTIFCSYDPDTLSKDPADGRKVKGVIHWVS 461 HSP 2 Score: 65.0846 bits (157), Expect = 4.195e-35 Identity = 34/75 (45.33%), Postives = 51/75 (68.00%), Query Frame = 3 Query: 510 EVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731 E+R++++LF+ NPA +D+L+ +NP+S +VI + EPSL +A +QFER G F D + S+ E LVFNRT Sbjct: 469 EIRVYDRLFSVPNPAAAEDFLTTINPES-LVIKHGFVEPSLAAAQPEKAYQFEREGYFCADNRHSSAEHLVFNRT 542
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_PSEA6 (Glutaminyl-tRNA synthetase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=glnS PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 5.463e-35 Identity = 60/164 (36.59%), Postives = 90/164 (54.88%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEY-------DPSKKTKPKGVLHWVA 475 T+ SI F + IG+++ D+++ + LE +R+ELN+ APR M VL P+K+VI N + L A P+ + +VPF+ +YIE DFR + +K + L GK V LR A+ IK V D++ + I EY DP+ K KGV+HWV+ Sbjct: 303 TAASIREFCKRIGVTKMDNMVEMSMLEAPLRDELNENAPRAMAVLEPVKIVIENYPQDGVELLAAPNHPNRPELGSR---EVPFAREIYIEAEDFREEANKKFKRLVLGKEVRLRNAYVIKAQRV-EKDEQGNVTTIFCEYDGDTLGKDPADGRKVKGVIHWVS 462 HSP 2 Score: 69.707 bits (169), Expect = 5.463e-35 Identity = 36/78 (46.15%), Postives = 50/78 (64.10%), Query Frame = 3 Query: 510 EVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDR----FQFERLGTFAVDKDSTPEKLVFNRT 731 E+RL++ LF NPA DD+++ +NP+S + + + + EPSL + + FQFER G F DKDST KLVFNRT Sbjct: 470 EIRLYDSLFTVPNPAAEDDFVACINPES-LTVKQGWVEPSLAKVDIDEANIQAFQFERTGYFCFDKDSTTSKLVFNRT 546
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_ENTS8 (Glutaminyl-tRNA synthetase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=glnS PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 5.463e-35 Identity = 61/164 (37.20%), Postives = 88/164 (53.66%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEY-------DPSKKTKPKGVLHWVA 475 T+ SI F + IG+++ D+ + + LE IRE+LN+ APR M V++P+K+VI N G H + P+ VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E + DD I I Y DP+ K KGV+HWV+ Sbjct: 303 TAASIREFCKRIGVTKQDNTVEMAALEACIREDLNENAPRAMAVIDPVKLVIENYPQG---HSEMVSMPNHPNKPEMGNRDVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIK-AERVEKDDAGEITTIYCTYDAETLSKDPADGRKVKGVIHWVS 462 HSP 2 Score: 70.0922 bits (170), Expect = 5.463e-35 Identity = 36/76 (47.37%), Postives = 53/76 (69.74%), Query Frame = 3 Query: 507 VEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731 VE+RL+++LF+ NP +D+L+ +N DS +VI + YAEP L +A G +QFER G F +D + + +KLVFNRT Sbjct: 469 VEIRLYDRLFSVPNPGAAEDFLTTINKDS-LVIKQGYAEPGLKNAEAGKAWQFEREGYFCLDSRHANGDKLVFNRT 543 The following BLAST results are available for this feature:
BLAST of DR908085 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 150
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908085 ID=DR908085; Name=DR908085; organism=Citrus sinensis; type=EST; length=731bpback to top |