DR908085
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_VIBVY (Glutaminyl-tRNA synthetase OS=Vibrio vulnificus (strain YJ016) GN=glnS PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 9.268e-35 Identity = 60/164 (36.59%), Postives = 89/164 (54.27%), Query Frame = 2
Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYD-------PSKKTKPKGVLHWVA 475
T SI F + IG+++ +++I LE IR++LN+ APR M VL+P+K+VI N +G + +L P+ +VPFS ++IE DFR + +K Y L G V LR A+ IK E + DD+ I I YD P+ K +GV+HWV+
Sbjct: 303 TPASIREFCKRIGVTKQENMIEFSSLESCIRDDLNENAPRAMAVLDPVKLVIENFPAGEVENLTVANHPN---KPEMGEREVPFSREIWIEREDFREEANKKYKRLVLGSEVRLRGAYVIK-AERVEKDDEGNITTIFCTYDSETLGVNPADGRKVRGVIHWVS 462 HSP 2 Score: 70.0922 bits (170), Expect = 9.268e-35 Identity = 37/75 (49.33%), Postives = 49/75 (65.33%), Query Frame = 3
Query: 510 EVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731
E+RL+++LF NPA DD+ S +NP+S V+ + EPSL A +QFER+G F D KDS+ E LVFNRT
Sbjct: 470 EIRLYDRLFTVPNPAAADDFASTINPESLTVM-NGFVEPSLVEAEAEKGYQFERMGYFCADSKDSSKEHLVFNRT 543
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_VIBFM (Glutaminyl-tRNA synthetase OS=Vibrio fischeri (strain MJ11) GN=glnS PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 9.269e-35 Identity = 63/164 (38.41%), Postives = 89/164 (54.27%), Query Frame = 2
Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYD-------PSKKTKPKGVLHWVA 475
TS SI F + IG+++ +++I LE IR++LN++APR M VL P+K+VI N E G + L+ P+ +VPF+ VYIE DFR + +K Y L GK V LR A+ I+ I D+ I I YD P+ K KGV+HWV+
Sbjct: 303 TSASIREFCKRIGVTKQENMIEFSSLESCIRDDLNESAPRAMAVLEPVKLVIENYEEGKVETLNIANHPN---KPEMGTREVPFTREVYIEQDDFREEANKKYKRLVLGKEVRLRGAYVIQANR-IEKDEAGNITTIFCSYDEDTLGKNPADGRKVKGVIHWVS 462 HSP 2 Score: 66.6254 bits (161), Expect = 9.269e-35 Identity = 34/75 (45.33%), Postives = 49/75 (65.33%), Query Frame = 3
Query: 510 EVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731
E+RL+++LF NP DD+ + +NP+S +V+ + EPSL +A +QFER G F D KDS+ + LVFNRT
Sbjct: 470 EIRLYDRLFTVPNPGAADDFAATINPES-LVVKNGFVEPSLATAEAEVGYQFERTGYFCADNKDSSADALVFNRT 543
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_VIBF1 (Glutaminyl-tRNA synthetase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=glnS PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 9.269e-35 Identity = 63/164 (38.41%), Postives = 89/164 (54.27%), Query Frame = 2
Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYD-------PSKKTKPKGVLHWVA 475
TS SI F + IG+++ +++I LE IR++LN++APR M VL P+K+VI N E G + L+ P+ +VPF+ VYIE DFR + +K Y L GK V LR A+ I+ I D+ I I YD P+ K KGV+HWV+
Sbjct: 303 TSASIREFCKRIGVTKQENMIEFSSLESCIRDDLNESAPRAMAVLEPVKLVIENYEEGKVETLNIANHPN---KPEMGTREVPFTREVYIEQDDFREEANKKYKRLVLGKEVRLRGAYVIQANR-IEKDEAGNITTIFCSYDEDTLGKNPADGRKVKGVIHWVS 462 HSP 2 Score: 66.6254 bits (161), Expect = 9.269e-35 Identity = 34/75 (45.33%), Postives = 49/75 (65.33%), Query Frame = 3
Query: 510 EVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731
E+RL+++LF NP DD+ + +NP+S +V+ + EPSL +A +QFER G F D KDS+ + LVFNRT
Sbjct: 470 EIRLYDRLFTVPNPGAADDFAATINPES-LVVKNGFVEPSLATAEAEVGYQFERTGYFCADNKDSSADALVFNRT 543
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_SALAR (Glutaminyl-tRNA synthetase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=glnS PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.572e-34 Identity = 60/164 (36.59%), Postives = 89/164 (54.27%), Query Frame = 2
Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEY-------DPSKKTKPKGVLHWVA 475
T+ SI F + IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N G + P+ + +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E + D + I I Y DP+ K KGV+HWV+
Sbjct: 303 TAASIREFCKRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYPQGESEMVTMPNHPNKLEMGSR---EVPFSGEIWIDRADFREEANKQYKRLVMGKEVRLRNAYVIK-AERVEKDAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS 462 HSP 2 Score: 72.4034 bits (176), Expect = 1.572e-34 Identity = 37/76 (48.68%), Postives = 54/76 (71.05%), Query Frame = 3
Query: 507 VEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731
+E+RL+++LF+ NP +D+LS +N +S +VI + Y EPSL +A G FQFER G F +D + +T +KLVFNRT
Sbjct: 469 IEIRLYDRLFSVPNPGAAEDFLSVINTES-LVIKQGYGEPSLKAAVAGKAFQFEREGYFCLDSRYATADKLVFNRT 543
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_NITWN (Glutaminyl-tRNA synthetase OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=glnS PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 2.667e-34 Identity = 59/164 (35.98%), Postives = 91/164 (55.49%), Query Frame = 2
Query: 2 VTSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPSKK-------TKPKGVLHWV 472
V + ++ FV+ IG+++++S + + L++ IRE LN++A R M VL PLKVVI N G L+A PD D + ++ F +YIE DF K ++ L+PG+ V LRYA+ I C EV+ + +L +R YDP+ + K K +HWV
Sbjct: 304 VPAEALREFVKRIGVAKANSTVDVGMLDFAIREALNRSASRRMAVLRPLKVVIENYPEGQSEELEAVNHPD---DPSQGTRRIRFGREIYIEQEDFMENPPKKFFRLSPGREVRLRYAYFITCREVV-KNPAGDVLELRCTYDPATRGGNAPDGRKVKATMHWV 463 HSP 2 Score: 60.077 bits (144), Expect = 2.667e-34 Identity = 33/74 (44.59%), Postives = 44/74 (59.46%), Query Frame = 3
Query: 510 EVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVDKDSTPEKLVFNRT 731
EVRL+ LF +E P + ++ S+LNP S ++ EP+L G QFER G F D+DS P +LVFNRT
Sbjct: 472 EVRLYGHLFETEQP-DAANFASELNPQSVQILSGCMVEPALARDDAGAAVQFERQGYFYRDRDSAPGRLVFNRT 544
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_CLOK5 (Glutaminyl-tRNA synthetase OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=glnS PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 4.525e-34 Identity = 67/163 (41.10%), Postives = 91/163 (55.83%), Query Frame = 2
Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPSKK-------TKPKGVLHWV 472
T SI F + IG+S++ S++ L+Y +R++L K APRTM +LNPLKVVITN G + PD D ++ +VPFS +YIE DF K YY L PG V L+ A+ IKCTE I D ++ +R YDP+ K K +G LHW+
Sbjct: 301 TPESIRNFCRAIGVSKASSIVDSQMLDYFLRDDLEKEAPRTMAILNPLKVVITNYPEGKTETFKIENNPD---DASAGVREVPFSREIYIEQEDFMENPPKKYYRLFPGNEVRLKSAYFIKCTEAI-KDKDGNVIELRCTYDPASKGGNSPDGRKVRGTLHWI 459 HSP 2 Score: 43.5134 bits (101), Expect = 4.525e-34 Identity = 29/76 (38.16%), Postives = 42/76 (55.26%), Query Frame = 3
Query: 510 EVRLFEKLF--NSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNR 728
E+RL+E L E E D +L +NP+S V+ + + EP + ++FQF R G F +D K S +LVFNR
Sbjct: 468 EIRLYEPLILEQQEKEGEEDLFLDHVNPNSLKVV-KGFVEPDMKHVKSDEKFQFFRHGYFVLDGKCSKNGELVFNR 542
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_VIBCM (Glutaminyl-tRNA synthetase OS=Vibrio cholerae serotype O1 (strain M66-2) GN=glnS PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 5.893e-34 Identity = 61/164 (37.20%), Postives = 91/164 (55.49%), Query Frame = 2
Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYD-------PSKKTKPKGVLHWVA 475
T ++I F + IG+++ +++I LE IR++LN+ APR M VL+P+K+VI N +GT+ L P+ +VPF+ ++IE DFR + +K Y L GK V LR A+ IK E I D++ I I YD P+ K KGV+HWV+
Sbjct: 303 TPSAIREFCKRIGVTKQENMIEYSALESCIRDDLNENAPRAMAVLDPVKLVIENFAAGTVETLTLANHPN---KPEMGDREVPFTRELWIEREDFREEANKKYKRLVLGKEVRLRGAYVIK-AERIEKDEQGNITTIFCSYDPETLGKNPADGRKVKGVIHWVS 462 HSP 2 Score: 67.3958 bits (163), Expect = 5.893e-34 Identity = 36/75 (48.00%), Postives = 48/75 (64.00%), Query Frame = 3
Query: 510 EVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731
E RL+E+LF NP D++ +NP+S V + + Y EPSL A +QFER+G F D KDS+P+ LVFNRT
Sbjct: 470 EFRLYERLFTVPNPGAADNFAETINPESLVKV-QGYVEPSLVEAKPEFGYQFERMGYFCADNKDSSPQALVFNRT 543
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_VIBCH (Glutaminyl-tRNA synthetase OS=Vibrio cholerae GN=glnS PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 5.893e-34 Identity = 61/164 (37.20%), Postives = 91/164 (55.49%), Query Frame = 2
Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYD-------PSKKTKPKGVLHWVA 475
T ++I F + IG+++ +++I LE IR++LN+ APR M VL+P+K+VI N +GT+ L P+ +VPF+ ++IE DFR + +K Y L GK V LR A+ IK E I D++ I I YD P+ K KGV+HWV+
Sbjct: 303 TPSAIREFCKRIGVTKQENMIEYSALESCIRDDLNENAPRAMAVLDPVKLVIENFAAGTVETLTLANHPN---KPEMGDREVPFTRELWIEREDFREEANKKYKRLVLGKEVRLRGAYVIK-AERIEKDEQGNITTIFCSYDPETLGKNPADGRKVKGVIHWVS 462 HSP 2 Score: 67.3958 bits (163), Expect = 5.893e-34 Identity = 36/75 (48.00%), Postives = 48/75 (64.00%), Query Frame = 3
Query: 510 EVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731
E RL+E+LF NP D++ +NP+S V + + Y EPSL A +QFER+G F D KDS+P+ LVFNRT
Sbjct: 470 EFRLYERLFTVPNPGAADNFAETINPESLVKV-QGYVEPSLVEAKPEFGYQFERMGYFCADNKDSSPQALVFNRT 543
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_VIBC3 (Glutaminyl-tRNA synthetase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=glnS PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 5.893e-34 Identity = 61/164 (37.20%), Postives = 91/164 (55.49%), Query Frame = 2
Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYD-------PSKKTKPKGVLHWVA 475
T ++I F + IG+++ +++I LE IR++LN+ APR M VL+P+K+VI N +GT+ L P+ +VPF+ ++IE DFR + +K Y L GK V LR A+ IK E I D++ I I YD P+ K KGV+HWV+
Sbjct: 303 TPSAIREFCKRIGVTKQENMIEYSALESCIRDDLNENAPRAMAVLDPVKLVIENFAAGTVETLTLANHPN---KPEMGDREVPFTRELWIEREDFREEANKKYKRLVLGKEVRLRGAYVIK-AERIEKDEQGNITTIFCSYDPETLGKNPADGRKVKGVIHWVS 462 HSP 2 Score: 67.3958 bits (163), Expect = 5.893e-34 Identity = 36/75 (48.00%), Postives = 48/75 (64.00%), Query Frame = 3
Query: 510 EVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731
E RL+E+LF NP D++ +NP+S V + + Y EPSL A +QFER+G F D KDS+P+ LVFNRT
Sbjct: 470 EFRLYERLFTVPNPGAADNFAETINPESLVKV-QGYVEPSLVEAKPEFGYQFERMGYFCADNKDSSPQALVFNRT 543
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_PSEAE (Glutaminyl-tRNA synthetase OS=Pseudomonas aeruginosa GN=glnS PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 5.893e-34 Identity = 59/162 (36.42%), Postives = 84/162 (51.85%), Query Frame = 2
Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPS------KKTKPKGVLHWV 472
T SI F + IG++R+ ++ + LE+ IR+ L+ TAPR M VL PLKVVITN G + +L+ R P + +PF ++I+ DF Y L PG V LR ++ I+ E I D I+ +R YDP + K KGV+HWV
Sbjct: 304 TPESIRNFCEMIGVNRASGVVDIGMLEFSIRDHLDATAPRAMCVLKPLKVVITNYPEGQVENLELPRHP----KEDMGVRVLPFGRELFIDAGDFEEVPPAGYKRLIPGGEVRLRGSYVIRADEAI-KDADGNIVELRCSYDPDTLGKNPEGRKVKGVIHWV 460 HSP 2 Score: 68.5514 bits (166), Expect = 5.893e-34 Identity = 40/78 (51.28%), Postives = 50/78 (64.10%), Query Frame = 3
Query: 510 EVRLFEKLFNSENPAELDD---WLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731
EVRL+++LF S NP + ++ +L ++N DS V+ AEPSL A DRFQFER G F D KDS P K VFNRT
Sbjct: 469 EVRLYDRLFRSANPEKAEEGGSFLDNINADSLQVLAGCRAEPSLGQANPEDRFQFEREGYFVADLKDSRPGKPVFNRT 546 The following BLAST results are available for this feature:
BLAST of DR908085 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 150
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DR908085 ID=DR908085; Name=DR908085; organism=Citrus sinensis; type=EST; length=731bpback to top |