DR908085
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_PSEAB (Glutaminyl-tRNA synthetase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=glnS PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 5.893e-34 Identity = 59/162 (36.42%), Postives = 84/162 (51.85%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPS------KKTKPKGVLHWV 472 T SI F + IG++R+ ++ + LE+ IR+ L+ TAPR M VL PLKVVITN G + +L+ R P + +PF ++I+ DF Y L PG V LR ++ I+ E I D I+ +R YDP + K KGV+HWV Sbjct: 304 TPESIRNFCEMIGVNRASGVVDIGMLEFSIRDHLDATAPRAMCVLKPLKVVITNYPEGQVENLELPRHP----KEDMGVRVLPFGRELFIDAGDFEEVPPAGYKRLIPGGEVRLRGSYVIRADEAI-KDADGNIVELRCSYDPDTLGKNPEGRKVKGVIHWV 460 HSP 2 Score: 68.5514 bits (166), Expect = 5.893e-34 Identity = 40/78 (51.28%), Postives = 50/78 (64.10%), Query Frame = 3 Query: 510 EVRLFEKLFNSENPAELDD---WLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731 EVRL+++LF S NP + ++ +L ++N DS V+ AEPSL A DRFQFER G F D KDS P K VFNRT Sbjct: 469 EVRLYDRLFRSANPEKAEEGGSFLDNINADSLQVLTGCRAEPSLGQANPEDRFQFEREGYFVADLKDSRPGKPVFNRT 546
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_PSEA8 (Glutaminyl-tRNA synthetase OS=Pseudomonas aeruginosa (strain LESB58) GN=glnS PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 5.893e-34 Identity = 59/162 (36.42%), Postives = 84/162 (51.85%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPS------KKTKPKGVLHWV 472 T SI F + IG++R+ ++ + LE+ IR+ L+ TAPR M VL PLKVVITN G + +L+ R P + +PF ++I+ DF Y L PG V LR ++ I+ E I D I+ +R YDP + K KGV+HWV Sbjct: 304 TPESIRNFCEMIGVNRASGVVDIGMLEFSIRDHLDATAPRAMCVLKPLKVVITNYPEGQVENLELPRHP----KEDMGVRVLPFGRELFIDAGDFEEVPPAGYKRLIPGGEVRLRGSYVIRADEAI-KDADGNIVELRCSYDPDTLGKNPEGRKVKGVIHWV 460 HSP 2 Score: 68.5514 bits (166), Expect = 5.893e-34 Identity = 40/78 (51.28%), Postives = 50/78 (64.10%), Query Frame = 3 Query: 510 EVRLFEKLFNSENPAELDD---WLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731 EVRL+++LF S NP + ++ +L ++N DS V+ AEPSL A DRFQFER G F D KDS P K VFNRT Sbjct: 469 EVRLYDRLFRSANPEKAEEGGSFLDNINADSLQVLTGCRAEPSLGQANPEDRFQFEREGYFVADLKDSRPGKPVFNRT 546
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_KLEP7 (Glutaminyl-tRNA synthetase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=glnS PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 5.893e-34 Identity = 60/164 (36.59%), Postives = 88/164 (53.66%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEY-------DPSKKTKPKGVLHWVA 475 T+ SI F + IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N G + P+ +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E + D + I I Y DP+ K KGV+HWV+ Sbjct: 303 TAESIREFCKRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYPQG---ESEMVVMPNHPNKPEMGSREVPFSAEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIK-AERVEKDAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS 462 HSP 2 Score: 72.4034 bits (176), Expect = 5.893e-34 Identity = 38/76 (50.00%), Postives = 53/76 (69.74%), Query Frame = 3 Query: 507 VEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731 VE+RL+++LF+ NP DD+L+ +NP+S +VI + YAEPSL A G +QFER G F +D + +T LVFNRT Sbjct: 469 VEIRLYDRLFSVPNPGAADDFLAVINPES-LVIKQGYAEPSLAQAEAGKAYQFEREGYFCLDSRYATATNLVFNRT 543
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_RALME (Glutaminyl-tRNA synthetase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=glnS PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.695e-33 Identity = 57/167 (34.13%), Postives = 83/167 (49.70%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPSKKT--------KPKGVLHWVAEP 481 T SI F +G+S++DS I + LE +R++L+ APR++ VL+PLK+++ N G A P F P S ++IE DF K Y+ L PG V LRY + I+CT V D ++ + A Y P K+ K KG +HWV+ P Sbjct: 331 TPESIQLFCDRVGVSKADSWIDMSTLEGAVRDDLDARAPRSVAVLDPLKLILDNYPEGQSEECSAPVHPKQPEMGRRVF---PLSRELWIEREDFNENPPKGYFRLFPGNKVRLRYGYVIECTGVD-KDADGNVIAVHANYLPETKSGTPGADSVKVKGNIHWVSAP 493 HSP 2 Score: 70.0922 bits (170), Expect = 1.695e-33 Identity = 42/76 (55.26%), Postives = 50/76 (65.79%), Query Frame = 3 Query: 510 EVRLFEKLFNSENP-AELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVDK-DSTPEKLVFNRT 731 EVRL+++LFN NP A ++L LNP+SK V+ AY EP L A DRFQFER G F D+ DS P K VFNRT Sbjct: 499 EVRLYDRLFNDPNPDAGGKNFLDALNPESKKVVT-AYLEPGLRDAKPEDRFQFERHGYFVADRVDSQPGKPVFNRT 573
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_YERPY (Glutaminyl-tRNA synthetase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=glnS PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.696e-33 Identity = 59/167 (35.33%), Postives = 91/167 (54.49%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRW---PDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEY-------DPSKKTKPKGVLHWVA 475 T+ SI F + IG+++ D+ + + LE IR++LN+ APR M VL+P+KVVI N +G + W P+ + +VPF + +YI+ +DFR + +K Y L GK V LR A+ IK E + D + + + Y DP+ K KGV+HWV+ Sbjct: 303 TAASIREFCRRIGVTKQDNNVEMMSLESCIRDDLNEHAPRAMAVLDPIKVVIENRAAG-------EEWLTMPNHPNNPEMGSRQVPFDSEIYIDRADFREEANKQYKRLVLGKEVRLRNAYVIK-AERVEKDAEGNVTTLYCSYDAETLNKDPADGRKVKGVIHWVS 461 HSP 2 Score: 68.9366 bits (167), Expect = 1.696e-33 Identity = 37/75 (49.33%), Postives = 50/75 (66.67%), Query Frame = 3 Query: 510 EVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731 E+RL+++LFN NPA +D+LS +NP+S +VI + + EPSL A +QFER G F D + S P LVFNRT Sbjct: 469 EIRLYDRLFNVPNPAAAEDFLSTINPES-LVIRQGFVEPSLADAVSDKTYQFEREGYFCADSRYSRPGALVFNRT 542
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_YERPS (Glutaminyl-tRNA synthetase OS=Yersinia pseudotuberculosis GN=glnS PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.696e-33 Identity = 59/167 (35.33%), Postives = 91/167 (54.49%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRW---PDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEY-------DPSKKTKPKGVLHWVA 475 T+ SI F + IG+++ D+ + + LE IR++LN+ APR M VL+P+KVVI N +G + W P+ + +VPF + +YI+ +DFR + +K Y L GK V LR A+ IK E + D + + + Y DP+ K KGV+HWV+ Sbjct: 303 TAASIREFCRRIGVTKQDNNVEMMSLESCIRDDLNEHAPRAMAVLDPIKVVIENRAAG-------EEWLTMPNHPNNPEMGSRQVPFDSEIYIDRADFREEANKQYKRLVLGKEVRLRNAYVIK-AERVEKDAEGNVTTLYCSYDAETLNKDPADGRKVKGVIHWVS 461 HSP 2 Score: 68.9366 bits (167), Expect = 1.696e-33 Identity = 37/75 (49.33%), Postives = 50/75 (66.67%), Query Frame = 3 Query: 510 EVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731 E+RL+++LFN NPA +D+LS +NP+S +VI + + EPSL A +QFER G F D + S P LVFNRT Sbjct: 469 EIRLYDRLFNVPNPAAAEDFLSTINPES-LVIRQGFVEPSLADAVSDKTYQFEREGYFCADSRYSRPGALVFNRT 542
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_YERPP (Glutaminyl-tRNA synthetase OS=Yersinia pestis (strain Pestoides F) GN=glnS PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.696e-33 Identity = 59/167 (35.33%), Postives = 91/167 (54.49%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRW---PDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEY-------DPSKKTKPKGVLHWVA 475 T+ SI F + IG+++ D+ + + LE IR++LN+ APR M VL+P+KVVI N +G + W P+ + +VPF + +YI+ +DFR + +K Y L GK V LR A+ IK E + D + + + Y DP+ K KGV+HWV+ Sbjct: 303 TAASIREFCRRIGVTKQDNNVEMMSLESCIRDDLNEHAPRAMAVLDPIKVVIENRAAG-------EEWLTMPNHPNNPEMGSRQVPFDSEIYIDRADFREEANKQYKRLVLGKEVRLRNAYVIK-AERVEKDAEGNVTTLYCSYDAETLNKDPADGRKVKGVIHWVS 461 HSP 2 Score: 68.9366 bits (167), Expect = 1.696e-33 Identity = 37/75 (49.33%), Postives = 50/75 (66.67%), Query Frame = 3 Query: 510 EVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731 E+RL+++LFN NPA +D+LS +NP+S +VI + + EPSL A +QFER G F D + S P LVFNRT Sbjct: 469 EIRLYDRLFNVPNPAAAEDFLSTINPES-LVIRQGFVEPSLADAVSDKTYQFEREGYFCADSRYSRPGALVFNRT 542
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_YERPN (Glutaminyl-tRNA synthetase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=glnS PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.696e-33 Identity = 59/167 (35.33%), Postives = 91/167 (54.49%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRW---PDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEY-------DPSKKTKPKGVLHWVA 475 T+ SI F + IG+++ D+ + + LE IR++LN+ APR M VL+P+KVVI N +G + W P+ + +VPF + +YI+ +DFR + +K Y L GK V LR A+ IK E + D + + + Y DP+ K KGV+HWV+ Sbjct: 303 TAASIREFCRRIGVTKQDNNVEMMSLESCIRDDLNEHAPRAMAVLDPIKVVIENRAAG-------EEWLTMPNHPNNPEMGSRQVPFDSEIYIDRADFREEANKQYKRLVLGKEVRLRNAYVIK-AERVEKDAEGNVTTLYCSYDAETLNKDPADGRKVKGVIHWVS 461 HSP 2 Score: 68.9366 bits (167), Expect = 1.696e-33 Identity = 37/75 (49.33%), Postives = 50/75 (66.67%), Query Frame = 3 Query: 510 EVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731 E+RL+++LFN NPA +D+LS +NP+S +VI + + EPSL A +QFER G F D + S P LVFNRT Sbjct: 469 EIRLYDRLFNVPNPAAAEDFLSTINPES-LVIRQGFVEPSLADAVSDKTYQFEREGYFCADSRYSRPGALVFNRT 542
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_YERPG (Glutaminyl-tRNA synthetase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=glnS PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.696e-33 Identity = 59/167 (35.33%), Postives = 91/167 (54.49%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRW---PDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEY-------DPSKKTKPKGVLHWVA 475 T+ SI F + IG+++ D+ + + LE IR++LN+ APR M VL+P+KVVI N +G + W P+ + +VPF + +YI+ +DFR + +K Y L GK V LR A+ IK E + D + + + Y DP+ K KGV+HWV+ Sbjct: 303 TAASIREFCRRIGVTKQDNNVEMMSLESCIRDDLNEHAPRAMAVLDPIKVVIENRAAG-------EEWLTMPNHPNNPEMGSRQVPFDSEIYIDRADFREEANKQYKRLVLGKEVRLRNAYVIK-AERVEKDAEGNVTTLYCSYDAETLNKDPADGRKVKGVIHWVS 461 HSP 2 Score: 68.9366 bits (167), Expect = 1.696e-33 Identity = 37/75 (49.33%), Postives = 50/75 (66.67%), Query Frame = 3 Query: 510 EVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731 E+RL+++LFN NPA +D+LS +NP+S +VI + + EPSL A +QFER G F D + S P LVFNRT Sbjct: 469 EIRLYDRLFNVPNPAAAEDFLSTINPES-LVIRQGFVEPSLADAVSDKTYQFEREGYFCADSRYSRPGALVFNRT 542
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_YERPE (Glutaminyl-tRNA synthetase OS=Yersinia pestis GN=glnS PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.696e-33 Identity = 59/167 (35.33%), Postives = 91/167 (54.49%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRW---PDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEY-------DPSKKTKPKGVLHWVA 475 T+ SI F + IG+++ D+ + + LE IR++LN+ APR M VL+P+KVVI N +G + W P+ + +VPF + +YI+ +DFR + +K Y L GK V LR A+ IK E + D + + + Y DP+ K KGV+HWV+ Sbjct: 303 TAASIREFCRRIGVTKQDNNVEMMSLESCIRDDLNEHAPRAMAVLDPIKVVIENRAAG-------EEWLTMPNHPNNPEMGSRQVPFDSEIYIDRADFREEANKQYKRLVLGKEVRLRNAYVIK-AERVEKDAEGNVTTLYCSYDAETLNKDPADGRKVKGVIHWVS 461 HSP 2 Score: 68.9366 bits (167), Expect = 1.696e-33 Identity = 37/75 (49.33%), Postives = 50/75 (66.67%), Query Frame = 3 Query: 510 EVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731 E+RL+++LFN NPA +D+LS +NP+S +VI + + EPSL A +QFER G F D + S P LVFNRT Sbjct: 469 EIRLYDRLFNVPNPAAAEDFLSTINPES-LVIRQGFVEPSLADAVSDKTYQFEREGYFCADSRYSRPGALVFNRT 542 The following BLAST results are available for this feature:
BLAST of DR908085 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 150
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908085 ID=DR908085; Name=DR908085; organism=Citrus sinensis; type=EST; length=731bpback to top |