DR908085
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_YERPB (Glutaminyl-tRNA synthetase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=glnS PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.696e-33 Identity = 59/167 (35.33%), Postives = 91/167 (54.49%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRW---PDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEY-------DPSKKTKPKGVLHWVA 475 T+ SI F + IG+++ D+ + + LE IR++LN+ APR M VL+P+KVVI N +G + W P+ + +VPF + +YI+ +DFR + +K Y L GK V LR A+ IK E + D + + + Y DP+ K KGV+HWV+ Sbjct: 303 TAASIREFCRRIGVTKQDNNVEMMSLESCIRDDLNEHAPRAMAVLDPIKVVIENRAAG-------EEWLTMPNHPNNPEMGSRQVPFDSEIYIDRADFREEANKQYKRLVLGKEVRLRNAYVIK-AERVEKDAEGNVTTLYCSYDAETLNKDPADGRKVKGVIHWVS 461 HSP 2 Score: 68.9366 bits (167), Expect = 1.696e-33 Identity = 37/75 (49.33%), Postives = 50/75 (66.67%), Query Frame = 3 Query: 510 EVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731 E+RL+++LFN NPA +D+LS +NP+S +VI + + EPSL A +QFER G F D + S P LVFNRT Sbjct: 469 EIRLYDRLFNVPNPAAAEDFLSTINPES-LVIRQGFVEPSLADAVSDKTYQFEREGYFCADSRYSRPGALVFNRT 542
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_YERPA (Glutaminyl-tRNA synthetase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=glnS PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.696e-33 Identity = 59/167 (35.33%), Postives = 91/167 (54.49%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRW---PDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEY-------DPSKKTKPKGVLHWVA 475 T+ SI F + IG+++ D+ + + LE IR++LN+ APR M VL+P+KVVI N +G + W P+ + +VPF + +YI+ +DFR + +K Y L GK V LR A+ IK E + D + + + Y DP+ K KGV+HWV+ Sbjct: 303 TAASIREFCRRIGVTKQDNNVEMMSLESCIRDDLNEHAPRAMAVLDPIKVVIENRAAG-------EEWLTMPNHPNNPEMGSRQVPFDSEIYIDRADFREEANKQYKRLVLGKEVRLRNAYVIK-AERVEKDAEGNVTTLYCSYDAETLNKDPADGRKVKGVIHWVS 461 HSP 2 Score: 68.9366 bits (167), Expect = 1.696e-33 Identity = 37/75 (49.33%), Postives = 50/75 (66.67%), Query Frame = 3 Query: 510 EVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731 E+RL+++LFN NPA +D+LS +NP+S +VI + + EPSL A +QFER G F D + S P LVFNRT Sbjct: 469 EIRLYDRLFNVPNPAAAEDFLSTINPES-LVIRQGFVEPSLADAVSDKTYQFEREGYFCADSRYSRPGALVFNRT 542
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_YERP3 (Glutaminyl-tRNA synthetase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=glnS PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.696e-33 Identity = 59/167 (35.33%), Postives = 91/167 (54.49%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRW---PDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEY-------DPSKKTKPKGVLHWVA 475 T+ SI F + IG+++ D+ + + LE IR++LN+ APR M VL+P+KVVI N +G + W P+ + +VPF + +YI+ +DFR + +K Y L GK V LR A+ IK E + D + + + Y DP+ K KGV+HWV+ Sbjct: 303 TAASIREFCRRIGVTKQDNNVEMMSLESCIRDDLNEHAPRAMAVLDPIKVVIENRAAG-------EEWLTMPNHPNNPEMGSRQVPFDSEIYIDRADFREEANKQYKRLVLGKEVRLRNAYVIK-AERVEKDAEGNVTTLYCSYDAETLNKDPADGRKVKGVIHWVS 461 HSP 2 Score: 68.9366 bits (167), Expect = 1.696e-33 Identity = 37/75 (49.33%), Postives = 50/75 (66.67%), Query Frame = 3 Query: 510 EVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731 E+RL+++LFN NPA +D+LS +NP+S +VI + + EPSL A +QFER G F D + S P LVFNRT Sbjct: 469 EIRLYDRLFNVPNPAAAEDFLSTINPES-LVIRQGFVEPSLADAVSDKTYQFEREGYFCADSRYSRPGALVFNRT 542
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_KLEP3 (Glutaminyl-tRNA synthetase OS=Klebsiella pneumoniae (strain 342) GN=glnS PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.696e-33 Identity = 60/164 (36.59%), Postives = 88/164 (53.66%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEY-------DPSKKTKPKGVLHWVA 475 T+ SI F + IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N G + P+ +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E + D + I I Y DP+ K KGV+HWV+ Sbjct: 303 TAESIREFCKRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYPQG---ESEMVAMPNHPNKPEMGSREVPFSAEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIK-AERVEKDAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS 462 HSP 2 Score: 70.0922 bits (170), Expect = 1.696e-33 Identity = 37/76 (48.68%), Postives = 52/76 (68.42%), Query Frame = 3 Query: 507 VEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731 VE+RL+++LF+ NP +D+L+ +NPDS +VI + YAEPSL A G +QFER G F +D + + LVFNRT Sbjct: 469 VEIRLYDRLFSVPNPGAEEDFLAVINPDS-LVIKQGYAEPSLAQAEAGKAYQFEREGYFCLDSRYANASSLVFNRT 543
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_ERWCT (Glutaminyl-tRNA synthetase OS=Erwinia carotovora subsp. atroseptica GN=glnS PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.696e-33 Identity = 62/164 (37.80%), Postives = 92/164 (56.10%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEY-------DPSKKTKPKGVLHWVA 475 +++SI F IG+++ D+ + + LE IR++LN+ APR M VL+P+KVVI N+ +G H + P+ +V FS VYI+ +DFR + +K Y L GK V LR A+ IK + I D++ TI I Y DP+ K KGV+HWV+ Sbjct: 303 SASSIREFCVRIGVTKQDNNVEMAALESCIRDDLNENAPRAMAVLDPVKVVIENLPAG---HEEFVAMPNHPNKPEMGSRQVAFSREVYIDRADFREEANKQYKRLVLGKEVRLRNAYVIK-ADRIEKDEQGTITTIYCSYDAETLSKDPADGRKVKGVIHWVS 462 HSP 2 Score: 65.0846 bits (157), Expect = 1.696e-33 Identity = 37/75 (49.33%), Postives = 49/75 (65.33%), Query Frame = 3 Query: 510 EVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVDK-DSTPEKLVFNRT 731 E RL+++LF+ NPA DD+LS +NPDS + I + + E SL A V +QFER G F D+ S+ E LVFNRT Sbjct: 470 EFRLYDRLFSVANPAAADDFLSTINPDS-LKITQGFVEASLVQAEVEKAYQFEREGYFCADRVYSSAEHLVFNRT 543
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_YERE8 (Glutaminyl-tRNA synthetase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=glnS PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.208e-33 Identity = 60/170 (35.29%), Postives = 91/170 (53.53%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRW---PDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEY----------DPSKKTKPKGVLHWVA 475 T+ SI F + IG+++ D+ + + LE IR++LN+ APR M VL+P+KVVI N +G + W P+ + +VPF + +YI+ +DFR + +K Y L GK V LR A+ IK V +K+ H+ Y DP+ K KGV+HWV+ Sbjct: 303 TAASIREFCRRIGVTKQDNNVEMMALESCIRDDLNENAPRAMAVLDPIKVVIENRAAG-------EEWLTMPNHPNNPDMGTRQVPFDSEIYIDRADFREEANKQYKRLVLGKEVRLRNAYVIKAERV----EKDAEGHVTTLYCSYDAETLNKDPADGRKVKGVIHWVS 461 HSP 2 Score: 67.781 bits (164), Expect = 2.208e-33 Identity = 35/75 (46.67%), Postives = 50/75 (66.67%), Query Frame = 3 Query: 510 EVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVDKD-STPEKLVFNRT 731 E+RL+++LF+ NPA +D+LS +NP+S ++I + + EPSL A +QFER G F D S P+ LVFNRT Sbjct: 469 EIRLYDRLFSVPNPAAAEDFLSTINPES-LIIRQGFVEPSLADAVPEKTYQFEREGYFCADSHYSRPDALVFNRT 542
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_PSEU5 (Glutaminyl-tRNA synthetase OS=Pseudomonas stutzeri (strain A1501) GN=glnS PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.876e-33 Identity = 57/162 (35.19%), Postives = 83/162 (51.23%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPS------KKTKPKGVLHWV 472 T SI F IG++R+ ++ + LE+ IRE+L+ A R M VL PLKVVITN + +L+ R P +PFS +YI+ DF + L PG V LR ++ I+ E + DD+ I+ +R YD + + K KGV+HWV Sbjct: 304 TPASIRNFCDMIGVNRAGGVVDIGMLEFAIREDLDANAARAMCVLKPLKVVITNYPQDQVENLELPRHPKQD----MGVRVLPFSREIYIDAGDFEEVPPAGFKRLVPGGEVRLRGSYVIRADEAV-KDDQGNIVELRCSYDENTLGKNPEGRKVKGVIHWV 460 HSP 2 Score: 70.0922 bits (170), Expect = 2.876e-33 Identity = 40/78 (51.28%), Postives = 53/78 (67.95%), Query Frame = 3 Query: 510 EVRLFEKLFNSENPAELDD---WLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731 EVRL+++LF S NP + ++ +L ++NP+S VV+ AEPSL +AA +RFQFER G F D KDS P VFNRT Sbjct: 469 EVRLYDRLFRSANPEKDEEGGSFLDNINPESLVVLKGCRAEPSLANAAPEERFQFEREGYFCADMKDSKPGAPVFNRT 546
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_TOLAT (Glutaminyl-tRNA synthetase OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=glnS PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 2.876e-33 Identity = 58/165 (35.15%), Postives = 89/165 (53.94%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVIL-SDDKETILHIRAEYD-----PSKKTKPKGVLHWVAEP 481 T ++ F IG+++ D+ + + LE IRE+LN+ APR M VL+PL+VV+ N + L+ P+ + VPFS +YI+ +DFR + +K Y L GK V LR+A+ IK V ++ T L+ + D P+ K KGV+HWV+ P Sbjct: 303 TPEAVREFCNRIGVTKQDNTVEMSALESCIREDLNERAPRAMAVLDPLRVVLENYPEDLVEELNIPNHPNI---PEAGERLVPFSREIYIDRADFREEANKQYKRLVMGKEVRLRHAYIIKAERVEKDAEGNITTLYCSCDRDTLGTNPADGRKVKGVIHWVSAP 464 HSP 2 Score: 65.855 bits (159), Expect = 2.876e-33 Identity = 36/75 (48.00%), Postives = 47/75 (62.67%), Query Frame = 3 Query: 510 EVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731 EVRL+++LF+ NP +D+LS +NP S ++P A EPSL A +QFER G F D K S+ EK VFN T Sbjct: 470 EVRLYDRLFSVANPGAAEDFLSTINPQSLRIVPHAKLEPSLRDAKPEFAYQFEREGYFCADSKLSSAEKPVFNLT 544
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_PSEHT (Glutaminyl-tRNA synthetase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=glnS PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 8.275e-33 Identity = 57/164 (34.76%), Postives = 85/164 (51.83%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYD-------PSKKTKPKGVLHWVA 475 T SI F IG+++ ++++ + LE IRE+LN+ APR M VL+P+K+VI N ++ + L P+ + VPF+ +YIE DF+ + + + L K V LR A+ IK V D+ I I YD PS K KGV+HWV+ Sbjct: 303 TPASIREFCLRIGVTKQENMVEMGMLEACIREDLNENAPRAMAVLDPVKIVIENYDADKVETLSVANHPN---KEEMGRRDVPFTREIYIEREDFKEEANNKFKRLVLDKEVRLRGAYVIKAQRV-EKDENGEITTIYCTYDPETLGKNPSDGRKVKGVIHWVS 462 HSP 2 Score: 70.0922 bits (170), Expect = 8.275e-33 Identity = 36/74 (48.65%), Postives = 51/74 (68.92%), Query Frame = 3 Query: 510 EVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVDKDSTPEKLVFNRT 731 EVRL+++LF+ NPA D++ S LNPDS V++ A EPSL ++A FQFER G F+ +DS + +VFN+T Sbjct: 470 EVRLYDRLFSVPNPAAADEFESTLNPDSLVILTNAKLEPSLANSAAEQGFQFERTGYFS--RDSKAKNIVFNQT 541
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_COLP3 (Glutaminyl-tRNA synthetase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=glnS PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.828e-32 Identity = 60/163 (36.81%), Postives = 86/163 (52.76%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEY-------DPSKKTKPKGVLHWV 472 T S+ F + IG+++ ++ I + LE IRE+LN APR M VL+P+K+VI N L K P +DD VPFS +YIE DFR + +K Y L K+V LR A+ + T D++ + + Y +P+ TKPKGV+HWV Sbjct: 303 TPASMREFAKRIGVTKMENTIEMSVLEACIREDLNDNAPRAMAVLDPIKLVIENYPEDKNEDLIVKNHP---SDDEQGTRIVPFSKELYIEAEDFREEANKKYKRLVIDKAVRLRGAYVVTATRCD-KDEQGNVTTVYCTYNEDTLGKNPTDGTKPKGVIHWV 461 HSP 2 Score: 64.6994 bits (156), Expect = 1.828e-32 Identity = 37/74 (50.00%), Postives = 44/74 (59.46%), Query Frame = 3 Query: 513 VRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVDKD-STPEKLVFNRT 731 VRL+++LF NPA DD+ S +NP S V I A EPSL A +QFER G F +D D P LVFNRT Sbjct: 471 VRLYDRLFTVPNPAAADDFNSVINPQSLVTITGAKVEPSLAEAKPEFAYQFERQGYFCLDNDIKEPGALVFNRT 544 The following BLAST results are available for this feature:
BLAST of DR908085 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 150
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908085 ID=DR908085; Name=DR908085; organism=Citrus sinensis; type=EST; length=731bpback to top |