DR908085
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_CUPTR (Glutaminyl-tRNA synthetase OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=glnS PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 2.378e-32 Identity = 55/165 (33.33%), Postives = 81/165 (49.09%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPSKKT--------KPKGVLHWVA 475 T SI F +G++++DS I + LE +R++L+ A R + VL+PLK++I N G A P F P S ++IE DF K Y+ L PG V L+Y + I+CT V D ++ + A Y P K+ K KGV+HWV+ Sbjct: 334 TPESIQLFCDRVGVAKADSWIDMSTLEGSVRDDLDGRAARGVAVLDPLKLIIDNYPEGQSEECSAPVHPKKPELGKRVF---PLSRELWIEREDFNETPPKGYFRLFPGNKVRLKYGYVIECTGVD-KDADGNVIAVHASYLPDTKSGTPGADSVKVKGVIHWVS 494 HSP 2 Score: 72.4034 bits (176), Expect = 2.378e-32 Identity = 44/75 (58.67%), Postives = 50/75 (66.67%), Query Frame = 3 Query: 510 EVRLFEKLFNSENP-AELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVDK-DSTPEKLVFNR 728 EVRL+++LFN NP A ++L LNPDSK VI AY EP L A DRFQFER G F D+ DSTP K VFNR Sbjct: 502 EVRLYDRLFNDPNPDAGGKNFLDALNPDSKQVIT-AYLEPGLREAQPEDRFQFERHGYFVADRSDSTPGKPVFNR 575
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_IDILO (Glutaminyl-tRNA synthetase OS=Idiomarina loihiensis GN=glnS PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.380e-32 Identity = 59/164 (35.98%), Postives = 86/164 (52.44%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEY-------DPSKKTKPKGVLHWVA 475 T S+ F + IG+++ D+ + + LE IR++LN APR M V++P+K+VI N G LDA P+ D +V FS ++IE DFR +K + L K V LR A+ I+ + I +DD I I Y DP+ K KGV+HWV+ Sbjct: 303 TPDSVREFCRRIGVTKMDNQVEMSMLEACIRDDLNVNAPRAMAVMDPVKIVIENYPEGEQELLDAPNHPN---DPEMGSRQVTFSREIWIEREDFRESANKKFKRLVLDKEVRLRNAYVIR-ADRIETDDNGEIQTIYCHYDADTLGKDPADGRKVKGVIHWVS 462 HSP 2 Score: 67.3958 bits (163), Expect = 2.380e-32 Identity = 34/75 (45.33%), Postives = 53/75 (70.67%), Query Frame = 3 Query: 510 EVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVDKDSTPE-KLVFNRT 731 E R++++LF NPA +D S LNP+S +VI + + E +L SA +G+ FQFERLG + +D+D+ E +L+FN+T Sbjct: 470 EFRVYDRLFQVPNPAAEEDLFSTLNPES-LVIKKGFVEANLASAKLGENFQFERLGYYCLDQDAETEGRLIFNQT 543
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_PECCP (Glutaminyl-tRNA synthetase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=glnS PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.100e-32 Identity = 62/164 (37.80%), Postives = 92/164 (56.10%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEY-------DPSKKTKPKGVLHWVA 475 +++SI F IG+++ D+ + + LE IR++LN+ APR M VL+P+KVVI N+ +G H + P+ +V FS VYI+ +DFR + +K Y L GK V LR A+ IK + I D++ TI I Y DP+ K KGV+HWV+ Sbjct: 303 SASSIREFCVRIGVTKQDNNVEMAALESCIRDDLNENAPRAMAVLDPVKVVIENLPAG---HEEFVAMPNHPNKPEMGSRQVAFSREVYIDRADFREEANKQYKRLVLGKEVRLRNAYVIK-ADRIEKDEQGTITTIYCSYDAETLSKDPADGRKVKGVIHWVS 462 HSP 2 Score: 60.8474 bits (146), Expect = 3.100e-32 Identity = 34/75 (45.33%), Postives = 47/75 (62.67%), Query Frame = 3 Query: 510 EVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVDK-DSTPEKLVFNRT 731 E RL+++LF+ NP +D+LS +NPDS + I + + E SL A +QFER G F D+ S+ E LVFNRT Sbjct: 470 EFRLYDRLFSVANPGAAEDFLSTINPDS-LKITQGFVEASLAQAEAEKAYQFEREGYFCADRVYSSAEHLVFNRT 543
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_NITHX (Glutaminyl-tRNA synthetase OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=glnS PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.036e-32 Identity = 58/165 (35.15%), Postives = 93/165 (56.36%), Query Frame = 2 Query: 2 VTSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPSKK-------TKPKGVLHWVA 475 V + ++ F++ IG+++++S + + L++ IRE LNK+APR M VL PLK+VI N G L+A PD D + ++ F +YIE DF K ++ L+PG+ V LRYA+ + C EV+ + ++ +R YDP+ K K K +HWV+ Sbjct: 304 VPAEALREFIKRIGVAKANSTVDVGMLDFAIRETLNKSAPRRMAVLRPLKIVIENYPEGESEELEAVNHPD---DPSRGTRRIRFGRELYIEQDDFMENPPKKFFRLSPGREVRLRYAYFVTCREVV-KNAAGDVVELRCTYDPATKGGNAPDGRKVKATMHWVS 464 HSP 2 Score: 50.8322 bits (120), Expect = 4.036e-32 Identity = 30/74 (40.54%), Postives = 42/74 (56.76%), Query Frame = 3 Query: 510 EVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVDKDSTPEKLVFNRT 731 E+RL+ LF + P + ++ S+LNP S + EP+L QFER G F D+DS+P +LVFNRT Sbjct: 472 EIRLYGHLFATAQP-DAANFASELNPQSLETL-SGMVEPALARDDTDGAVQFERQGYFCRDRDSSPGRLVFNRT 543
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_AZOVD (Glutaminyl-tRNA synthetase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=glnS PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 4.036e-32 Identity = 60/162 (37.04%), Postives = 83/162 (51.23%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPS------KKTKPKGVLHWV 472 T SI AF IG++R+ ++ + LE+ IRE+L+ A R M VL PLKVVITN G + L+ R P +PFS +YI+ DF Y L PG V LR ++ I+ E I D+ I+ +R YD + + K KGV+HWV Sbjct: 304 TPASIRAFCDMIGVNRAGGVVDIGMLEFAIREDLDANAARAMCVLKPLKVVITNYPQGRVESLELPRHPKQD----MGVRVLPFSREIYIDAGDFEETPPAGYKRLIPGGEVRLRGSYVIRADEAI-KDEAGNIVELRCSYDENTLGKNPEGRKVKGVIHWV 460 HSP 2 Score: 62.3882 bits (150), Expect = 4.036e-32 Identity = 37/78 (47.44%), Postives = 49/78 (62.82%), Query Frame = 3 Query: 510 EVRLFEKLFNSENPAELDD---WLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731 EVRL+++LF NP + ++ +L ++N S VV+ AEPSL +A +RFQFER G F D KDS P VFNRT Sbjct: 469 EVRLYDRLFKVANPEKSEEGGSFLDNINSGSLVVLTGCRAEPSLANARPEERFQFEREGYFCADLKDSRPGAPVFNRT 546
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_PHOLL (Glutaminyl-tRNA synthetase OS=Photorhabdus luminescens subsp. laumondii GN=glnS PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 8.914e-32 Identity = 59/164 (35.98%), Postives = 88/164 (53.66%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEY-------DPSKKTKPKGVLHWVA 475 T+ SI F + IG+++ D+ + + LE IR++LN+ APR M VL+P+++VI NM G P+ +VPFS +YI+ +DFR + ++ Y L GK V LR A+ IK E + D + I I Y DP+ K KGV+HWV+ Sbjct: 303 TAASIREFCRRIGVTKQDNNVEMAALESCIRDDLNENAPRAMAVLDPVRLVIENMPEGE----QILSMPNHPNKPEMGSREVPFSREIYIDRADFREEANRQYKRLVLGKEVRLRNAYIIK-AERVEKDADDNITTIYCSYDDQTLNKDPADGRKVKGVIHWVS 461 HSP 2 Score: 62.3882 bits (150), Expect = 8.914e-32 Identity = 35/75 (46.67%), Postives = 47/75 (62.67%), Query Frame = 3 Query: 510 EVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVDK-DSTPEKLVFNRT 731 E RL+++LF NP DD+L+ +NP+S +VI + + EPSL A +QFER G F D S+ E LVFNRT Sbjct: 469 EFRLYDRLFCVPNPGAEDDFLATINPES-LVIRQGFVEPSLADAKSEQTYQFEREGYFCADSCHSSAENLVFNRT 542
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_NITEU (Glutaminyl-tRNA synthetase OS=Nitrosomonas europaea GN=glnS1 PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.161e-31 Identity = 60/165 (36.36%), Postives = 89/165 (53.94%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPSKKT--------KPKGVLHWVA 475 T SI F + IGIS++DS I + LE +RE+LN+ A R + VL+P+ ++I N G H + P+ ++ + +YI+ DF +K ++ LAPG V LRYAF IKCT V+ DD+ IL I YDP K+ K +G +HW++ Sbjct: 305 TPESIRLFAERIGISKADSWIDMTILEDCLREDLNERALRRIAVLDPVSLIIDNFPDG---HEETCYAPNHPQKPELGTRELRLTKQLYIDREDFMEIPNKGFFRLAPGAEVRLRYAFIIKCTHVV-KDDQGKILEIHCVYDPDTKSGTAGAETRKVRGNIHWLS 465 HSP 2 Score: 60.8474 bits (146), Expect = 1.161e-31 Identity = 38/77 (49.35%), Postives = 47/77 (61.04%), Query Frame = 3 Query: 507 VEVRLFEKLFNSENP-AELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731 VE+RL+++LF +P E D+ LNP+SK VI Y EPSL A RFQFER G F D D+ P K +FNRT Sbjct: 472 VEIRLYDRLFIDSHPDTEGKDFKISLNPNSKEVIT-GYVEPSLCEAQPEQRFQFERHGYFVADLADTGPGKPIFNRT 547
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_RALEH (Glutaminyl-tRNA synthetase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=glnS PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.510e-31 Identity = 55/165 (33.33%), Postives = 81/165 (49.09%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPSKKT--------KPKGVLHWVA 475 T SI F +G++++DS I + LE +R++L+ A R + VL+PLK++I N G A P F P S ++IE DF K Y+ L PG V L+Y + I+CT V D ++ + A Y P K+ K KGV+HWV+ Sbjct: 334 TPESIQLFCDRVGVAKADSWIDMSTLEGAVRDDLDGRAARGVAVLDPLKLIIDNYPEGQSEECSAPVHPKKPELGKRVF---PLSRELWIEREDFNETPPKGYFRLFPGNKVRLKYGYVIECTGVD-KDADGNVIAVHASYLPETKSGTPGADSVKVKGVIHWVS 494 HSP 2 Score: 70.0922 bits (170), Expect = 1.510e-31 Identity = 43/75 (57.33%), Postives = 49/75 (65.33%), Query Frame = 3 Query: 510 EVRLFEKLFNSENP-AELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVDK-DSTPEKLVFNR 728 EVRL+++LFN NP A ++L LNPDSK VI AY EP L A DRFQFER G F D+ DS P K VFNR Sbjct: 502 EVRLYDRLFNDPNPDAGGKNFLDALNPDSKQVIT-AYLEPGLREAQPEDRFQFERHGYFVADRTDSQPGKPVFNR 575
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_ALTMD (Glutaminyl-tRNA synthetase OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=glnS PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 3.338e-31 Identity = 59/163 (36.20%), Postives = 86/163 (52.76%), Query Frame = 2 Query: 5 TSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEY-------DPSKKTKPKGVLHWV 472 T SI F + IG+++ D+++ + LE IR++LN APR M VL+P+K+VI N E G L A P+ D++ + FS VYIE DFR +K + L K V LR A+ +K V D++ + + Y DP+ K KGV+HWV Sbjct: 303 TPGSIVEFCKRIGVTKMDNMVEMSMLEACIRDDLNANAPRAMAVLDPIKLVIENYEEGKTETLVAPNHPN---DESMGTRNIGFSREVYIEAEDFRESANKKFKRLVLEKEVRLRNAYVVKANRV-EKDEEGNVTTVYCTYDPDTLGKDPADGRKVKGVIHWV 461 HSP 2 Score: 61.6178 bits (148), Expect = 3.338e-31 Identity = 36/76 (47.37%), Postives = 49/76 (64.47%), Query Frame = 3 Query: 510 EVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSL--HSAAVGDRFQFERLGTFAVDKDSTPEKLVFNRT 731 E RL+++LFN NPA +++ +NP+S + + + +AE L H VG +QFER G F VDKDST K VFNRT Sbjct: 470 EFRLYDRLFNVPNPAAEENFTDAINPES-LEVKQGWAEAGLIGHVPEVG-AWQFERTGYFCVDKDSTDAKPVFNRT 543
BLAST of DR908085 vs. ExPASy Swiss-Prot
Match: SYQ_PSYIN (Glutaminyl-tRNA synthetase OS=Psychromonas ingrahamii (strain 37) GN=glnS PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.338e-31 Identity = 59/163 (36.20%), Postives = 88/163 (53.99%), Query Frame = 2 Query: 8 STSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYD-------PSKKTKPKGVLHWVA 475 + SI F + IG+++ ++ + L LE +RE L APR M V++P+KV+I+N + L A P D++ V FS ++I+ +DFR + +K Y L GK V LR A+ IK +VI +D E I I YD P+ K KGV+HWV+ Sbjct: 305 AASIREFCKRIGVTKQENTVELASLEACVRENLEANAPRAMAVIDPVKVIISNYDENKTEKLIAAIHP---KDESMGTRTVTFSREIFIDRADFREEANKKYKRLVLGKEVRLRNAYVIKADQVIKNDAGE-ITEIHCSYDPETLGNNPTDGRKVKGVIHWVS 463 HSP 2 Score: 60.4622 bits (145), Expect = 3.338e-31 Identity = 35/75 (46.67%), Postives = 46/75 (61.33%), Query Frame = 3 Query: 510 EVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGTFAVD-KDSTPEKLVFNRT 731 E R++E LF ENPA ++ LNP++ +VI + E L A +QFER G F D KDS+PE+LVFNRT Sbjct: 471 EFRIYEPLFLVENPAAAENIDEVLNPNA-LVIKHGFVESGLSDALAEKAYQFEREGYFCADNKDSSPERLVFNRT 544 The following BLAST results are available for this feature:
BLAST of DR908085 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 150
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DR908085 ID=DR908085; Name=DR908085; organism=Citrus sinensis; type=EST; length=731bpback to top |