DR406179

Overview
NameDR406179
Unique NameDR406179
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length745
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DR406179_ssr44 microsatellite DR406179_ssr44:44..58. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of DR406179 vs. ExPASy Swiss-Prot
Match: ASNA_DICDI (ATPase ASNA1 homolog OS=Dictyostelium discoideum GN=arsA PE=1 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.810e-50
Identity = 89/179 (49.72%), Postives = 127/179 (70.95%), Query Frame = 2
Query:  104 EGSVRNILEQDSLKWVFXXXXXXXXXXXCSSILSILLAEVRPSVLIISTDPAHNLSDAFQQRFTKTPTLVNGFSNLYAMEVDPSVEE---ETGSTEGMDSLFSELANAIPGIDEAMSFAEMLKLVQTMDYSCIVFDTAPTGHTLRLLQFPSTLEKGLDKMMSLKNKFGGMINQMTRLFG 631
            E ++ NI+  + LKW+F            S  ++I L++V+ SVL+ISTDPAHNLSDAF Q+FTK+PTLV GF+NL+AME+DP+ ++   E   T+       E   AIPGIDEAMSFAE++KLV+++++S +VFDTAPTGHTLRLL  PS L+KG++K +S++  F G+ N ++ + G
Sbjct:    7 EPTIENIINSEKLKWIFVGGKGGVGKTTTSCSVAIQLSKVKESVLLISTDPAHNLSDAFGQKFTKSPTLVEGFTNLFAMEIDPTPDQLAPEFMETQSDGFNLQEFTAAIPGIDEAMSFAEVMKLVKSLEFSVVVFDTAPTGHTLRLLSIPSLLDKGINKFLSMQQNFSGIFNAVSGMMG 185          

HSP 2 Score: 36.5798 bits (83), Expect = 1.810e-50
Identity = 15/26 (57.69%), Postives = 20/26 (76.92%), Query Frame = 3
Query:  666 GRLXXMKDVIERVNKQFKDPDLTTFV 743
            G++   K VIE +N QFK+PDLTTF+
Sbjct:  196 GKIQSTKKVIEEINIQFKNPDLTTFI 221          
BLAST of DR406179 vs. ExPASy Swiss-Prot
Match: ASNA_DANRE (ATPase asna1 OS=Danio rerio GN=asna1 PE=1 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 3.074e-50
Identity = 93/188 (49.47%), Postives = 127/188 (67.55%), Query Frame = 2
Query:  104 EGSVRNILEQDSLKWVFXXXXXXXXXXXCSSILSILLAEVRPSVLIISTDPAHNLSDAFQQRFTKTPTLVNGFSNLYAMEVDPSVE---------EETGSTEGMDSLFSELANAIPGIDEAMSFAEMLKLVQTMDYSCIVFDTAPTGHTLRLLQFPSTLEKGLDKMMSLKNKFGGMINQMTRLFGIDD 640
            E +++NI+EQ SLKW+F           CS  L++ LA VR SVLIISTDPAHN+SDAF Q+F+K PT V G+ NL+AME+DPS+          EE         +  E  +A PGIDEAMS+AE+++LV+ M++S +VFDTAPTGHTLRLL FP+ +E+GL ++M +KN+    I+QM  + G+ D
Sbjct:   19 EPTLKNIIEQKSLKWIFVGGKGGVGKTTCSCSLAVQLAAVRESVLIISTDPAHNISDAFDQKFSKVPTKVKGYDNLFAMEIDPSLGVAELPDEFFEEDNMLSMGKKMMQEAMSAFPGIDEAMSYAEVMRLVKGMNFSVVVFDTAPTGHTLRLLNFPTIVERGLGRLMQIKNQISPFISQMCNMLGLGD 206          

HSP 2 Score: 31.187 bits (69), Expect = 3.074e-50
Identity = 14/30 (46.67%), Postives = 19/30 (63.33%), Query Frame = 3
Query:  654 DALLGRLXXMKDVIERVNKQFKDPDLTTFV 743
            D L  +L     VI  V++QFKDP+ TTF+
Sbjct:  210 DQLASKLEETLPVIRSVSEQFKDPEQTTFI 239          
BLAST of DR406179 vs. ExPASy Swiss-Prot
Match: GET3_LACBS (ATPase GET3 OS=Laccaria bicolor (strain S238N-H82) GN=GET3 PE=3 SV=2)

HSP 1 Score: 181.03 bits (458), Expect = 1.508e-49
Identity = 100/184 (54.35%), Postives = 129/184 (70.11%), Query Frame = 2
Query:  110 SVRNILEQDSLKWVFXXXXXXXXXXXCSSILSILLAEVRPSVLIISTDPAHNLSDAFQQRFTKTPTLVNGFSNLYAMEVDPS------VEE--ETGSTEGMDSLFSELANAIPGIDEAMSFAEMLK--LVQTMDYSCIVFDTAPTGHTLRLLQFPSTLEKGLDKMMSLKNKFGGMINQMTRLFG 631
            +++NIL+Q SLKW+F            S  L+I LA+ R SVL+ISTDPAHNLSDAF Q+F+K  T VNGF NL+AME+DP+      VE+     S   M S+  +LA AIPG+DEAMSFAE++K   V++M+YS IVFDTAPTGHTLR L FP+ LEK L K+ SL ++FG MI+QM+ + G
Sbjct:    9 TLQNILDQTSLKWIFCGGKGGVGKTTTSCSLAIQLAKCRKSVLLISTDPAHNLSDAFGQKFSKDATKVNGFDNLFAMEIDPTSAIQEMVEQCMLADSNGMMGSMMQDLAFAIPGVDEAMSFAEIMKHVHVKSMEYSVIVFDTAPTGHTLRFLSFPTVLEKALGKLSSLGSRFGPMISQMSSMMG 192          

HSP 2 Score: 35.039 bits (79), Expect = 1.508e-49
Identity = 15/31 (48.39%), Postives = 21/31 (67.74%), Query Frame = 3
Query:  651 EDALLGRLXXMKDVIERVNKQFKDPDLTTFV 743
            ++ +  +L  M+ VI  VN QFKDP+ TTFV
Sbjct:  198 QEDMFAKLESMRGVITEVNTQFKDPEKTTFV 228          
BLAST of DR406179 vs. ExPASy Swiss-Prot
Match: GET3_COCIM (ATPase GET3 OS=Coccidioides immitis GN=GET3 PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.965e-49
Identity = 96/184 (52.17%), Postives = 125/184 (67.93%), Query Frame = 2
Query:   95 EIPEGSVRNILEQDSLKWVFXXXXXXXXXXXCSSILSILLAEVRPSVLIISTDPAHNLSDAFQQRFTKTPTLVNGFSNLYAMEVDPSVEEE----TGSTEGMD------SLFSELANAIPGIDEAMSFAEMLKLVQTMDYSCIVFDTAPTGHTLRLLQFPSTLEKGLDKMMSLKNKFGGMINQM 616
            +I E ++++IL+Q SL+W+F            S  L+I LA+VR SVL+ISTDPAHNLSDAF Q+F K   LV+GF NL AME+DPS   +     G  +G D       +  +LA +IPG+DEAMSFAE+LK V+++ Y  IVFDTAPTGHTLR LQFP+ LEKGL K+  L N+FG M+N +
Sbjct:   11 DILEPTLQSILDQKSLRWIFVGGKGGVGKTTTSCSLAIQLAKVRKSVLLISTDPAHNLSDAFGQKFGKEARLVDGFDNLSAMEIDPSASMQDLLAAGGEQGEDMGFGLGGMMQDLAFSIPGVDEAMSFAEVLKQVKSLSYEVIVFDTAPTGHTLRFLQFPTVLEKGLAKLSQLSNQFGPMLNSV 194          

HSP 2 Score: 36.1946 bits (82), Expect = 1.965e-49
Identity = 15/30 (50.00%), Postives = 21/30 (70.00%), Query Frame = 3
Query:  654 DALLGRLXXMKDVIERVNKQFKDPDLTTFV 743
            D +L ++  +++ I  VN QFKD DLTTFV
Sbjct:  208 DEVLSKMESLRETISEVNAQFKDADLTTFV 237          
BLAST of DR406179 vs. ExPASy Swiss-Prot
Match: GET3_SCHPO (ATPase get3 OS=Schizosaccharomyces pombe GN=get3 PE=1 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.966e-49
Identity = 90/185 (48.65%), Postives = 124/185 (67.03%), Query Frame = 2
Query:  107 GSVRNILEQDSLKWVFXXXXXXXXXXXCSSILSILLAEVRPSVLIISTDPAHNLSDAFQQRFTKTPTLVNGFSNLYAMEVDP--SVEEETGSTEG------MDSLFSELANAIPGIDEAMSFAEMLKLVQTMDYSCIVFDTAPTGHTLRLLQFPSTLEKGLDKMMSLKNKFGGMINQMTRLFGID 637
            G++ N+LEQ SLKW+F            S  L+I +++VR SVL+ISTDPAHNLSDAF  +F K    V GF NL AME+DP  S++E T   +       +  +  +LA  IPGIDEA++FAE+LK +++M++ C++FDTAPTGHTLR L FP+ LEK L K+  L ++FG MINQM  + G++
Sbjct:    8 GTLENLLEQTSLKWIFVGGKGGVGKTTTSCSLAIQMSKVRSSVLLISTDPAHNLSDAFGTKFGKDARKVPGFDNLSAMEIDPNLSIQEMTEQADQQNPNNPLSGMMQDLAFTIPGIDEALAFAEILKQIKSMEFDCVIFDTAPTGHTLRFLNFPTVLEKALGKLGGLSSRFGPMINQMGSIMGVN 192          

HSP 2 Score: 39.2762 bits (90), Expect = 1.966e-49
Identity = 18/31 (58.06%), Postives = 22/31 (70.97%), Query Frame = 3
Query:  651 EDALLGRLXXMKDVIERVNKQFKDPDLTTFV 743
            E  L G++  M+  I  VNKQFK+PDLTTFV
Sbjct:  195 EQDLFGKMESMRANISEVNKQFKNPDLTTFV 225          
BLAST of DR406179 vs. ExPASy Swiss-Prot
Match: GET3_COCP7 (ATPase GET3 OS=Coccidioides posadasii (strain C735) GN=GET3 PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.966e-49
Identity = 96/184 (52.17%), Postives = 125/184 (67.93%), Query Frame = 2
Query:   95 EIPEGSVRNILEQDSLKWVFXXXXXXXXXXXCSSILSILLAEVRPSVLIISTDPAHNLSDAFQQRFTKTPTLVNGFSNLYAMEVDPSVEEE----TGSTEGMD------SLFSELANAIPGIDEAMSFAEMLKLVQTMDYSCIVFDTAPTGHTLRLLQFPSTLEKGLDKMMSLKNKFGGMINQM 616
            +I E ++++IL+Q SL+W+F            S  L+I LA+VR SVL+ISTDPAHNLSDAF Q+F K   LV+GF NL AME+DPS   +     G  +G D       +  +LA +IPG+DEAMSFAE+LK V+++ Y  IVFDTAPTGHTLR LQFP+ LEKGL K+  L N+FG M+N +
Sbjct:   11 DILEPTLQSILDQKSLRWIFVGGKGGVGKTTTSCSLAIQLAKVRKSVLLISTDPAHNLSDAFGQKFGKEARLVDGFDNLSAMEIDPSASMQDLLAAGGEQGEDMGFGLGGMMQDLAFSIPGVDEAMSFAEVLKQVKSLSYEVIVFDTAPTGHTLRFLQFPTVLEKGLAKLSQLSNQFGPMLNSV 194          

HSP 2 Score: 36.1946 bits (82), Expect = 1.966e-49
Identity = 15/30 (50.00%), Postives = 21/30 (70.00%), Query Frame = 3
Query:  654 DALLGRLXXMKDVIERVNKQFKDPDLTTFV 743
            D +L ++  +++ I  VN QFKD DLTTFV
Sbjct:  208 DEVLSKMESLRETISEVNAQFKDADLTTFV 237          
BLAST of DR406179 vs. ExPASy Swiss-Prot
Match: ASNA_CAEEL (ATPase asna-1 OS=Caenorhabditis elegans GN=asna-1 PE=1 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 2.561e-49
Identity = 99/197 (50.25%), Postives = 127/197 (64.47%), Query Frame = 2
Query:  104 EGSVRNILEQDSLKWVFXXXXXXXXXXXCSSILSILLAEVRPSVLIISTDPAHNLSDAFQQRFTKTPTLVNGFSNLYAMEVDP----------SVEE---ETGSTEGMDSLFS-------ELANAIPGIDEAMSFAEMLKLVQTMDYSCIVFDTAPTGHTLRLLQFPSTLEKGLDKMMSLKNKFGGMINQMTRLFGI 634
            E S++NILEQ +LKW+F           CS  L+  L++VR  VL+ISTDPAHN+SDAF Q+FTKTPTLV GF NL+AME+D           ++EE        EG    FS         A  +PGIDEAMSF EM+KL+ ++D+  +VFDTAPTGHTLRLLQFP+ LEK   K++SL+  FG M+NQ   +FG+
Sbjct:    6 EASIKNILEQKTLKWIFVGGKGGVGKTTCSCSLAAQLSKVRERVLLISTDPAHNISDAFSQKFTKTPTLVEGFKNLFAMEIDSNPNGEGVEMGNIEEMLQNAAQNEGGSGGFSMGKDFLQSFAGGLPGIDEAMSFGEMIKLIDSLDFDVVVFDTAPTGHTLRLLQFPTLLEKVFTKILSLQGMFGPMMNQFGGMFGM 202          

HSP 2 Score: 28.4906 bits (62), Expect = 2.561e-49
Identity = 10/28 (35.71%), Postives = 20/28 (71.43%), Query Frame = 3
Query:  660 LLGRLXXMKDVIERVNKQFKDPDLTTFV 743
            ++ ++    + ++++N QFKDP+ TTFV
Sbjct:  210 MIEKMTTTLESVKKMNAQFKDPNCTTFV 237          
BLAST of DR406179 vs. ExPASy Swiss-Prot
Match: GET3_SCHJY (ATPase get3 OS=Schizosaccharomyces japonicus (strain yFS275 / FY16936) GN=get3 PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.563e-49
Identity = 91/188 (48.40%), Postives = 124/188 (65.96%), Query Frame = 2
Query:   92 LEIPEGSVRNILEQDSLKWVFXXXXXXXXXXXCSSILSILLAEVRPSVLIISTDPAHNLSDAFQQRFTKTPTLVNGFSNLYAMEVDPSVE--------EETGSTEGMDSLFSELANAIPGIDEAMSFAEMLKLVQTMDYSCIVFDTAPTGHTLRLLQFPSTLEKGLDKMMSLKNKFGGMINQMTRLFG 631
            LE   G++ N+LEQ SLKW+F            S  L+I +++VR SVL+ISTDPAHNLSDAF  +F K   L+ GF NL AME+DP+          E+      M  +  +LA AIPGIDEA++FAE++K V++M++ C++FDTAPTGHTLR L FP+ LEK L K+  L ++FG +INQM+ + G
Sbjct:    3 LEPLPGTLENLLEQTSLKWIFVGGKGGVGKTTTSCSLAIQMSKVRKSVLLISTDPAHNLSDAFGTKFGKEARLIPGFENLSAMEIDPNASIQEMLEQSEQQNPNNPMSGMMQDLAFAIPGIDEALAFAEVMKEVKSMNFDCVIFDTAPTGHTLRFLNFPTVLEKALAKLSGLTSRFGPLINQMSGMLG 190          

HSP 2 Score: 36.5798 bits (83), Expect = 2.563e-49
Identity = 15/31 (48.39%), Postives = 22/31 (70.97%), Query Frame = 3
Query:  651 EDALLGRLXXMKDVIERVNKQFKDPDLTTFV 743
            ++ +  ++  M+  I  VNKQFK+PDLTTFV
Sbjct:  195 QEDIFAKMEGMRGSISEVNKQFKNPDLTTFV 225          
BLAST of DR406179 vs. ExPASy Swiss-Prot
Match: ASNA_MOUSE (ATPase Asna1 OS=Mus musculus GN=Asna1 PE=1 SV=2)

HSP 1 Score: 182.57 bits (462), Expect = 7.390e-49
Identity = 91/188 (48.40%), Postives = 126/188 (67.02%), Query Frame = 2
Query:  104 EGSVRNILEQDSLKWVFXXXXXXXXXXXCSSILSILLAEVRPSVLIISTDPAHNLSDAFQQRFTKTPTLVNGFSNLYAMEVDPSVE---------EETGSTEGMDSLFSELANAIPGIDEAMSFAEMLKLVQTMDYSCIVFDTAPTGHTLRLLQFPSTLEKGLDKMMSLKNKFGGMINQMTRLFGIDD 640
            E ++ NI+EQ SLKW+F           CS  L++ L++ R SVLIISTDPAHN+SDAF Q+F+K PT V G+ NL+AME+DPS+          EE         +  E  +A PGIDEAMS+AE+++LV+ M++S +VFDTAPTGHTLRLL FP+ +E+GL ++M +KN+    I+QM  + G+ D
Sbjct:   25 EPTLSNIIEQRSLKWIFVGGKGGVGKTTCSCSLAVQLSKGRESVLIISTDPAHNISDAFDQKFSKVPTKVKGYDNLFAMEIDPSLGVAELPDEFFEEDNMLSMGKKMMQEAMSAFPGIDEAMSYAEVMRLVKGMNFSVVVFDTAPTGHTLRLLNFPTIVERGLGRLMQIKNQISPFISQMCNMLGLGD 212          

HSP 2 Score: 31.187 bits (69), Expect = 7.390e-49
Identity = 14/30 (46.67%), Postives = 19/30 (63.33%), Query Frame = 3
Query:  654 DALLGRLXXMKDVIERVNKQFKDPDLTTFV 743
            D L  +L     VI  V++QFKDP+ TTF+
Sbjct:  216 DQLASKLEETLPVIRSVSEQFKDPEQTTFI 245          
BLAST of DR406179 vs. ExPASy Swiss-Prot
Match: ASNA_HUMAN (ATPase ASNA1 OS=Homo sapiens GN=ASNA1 PE=1 SV=2)

HSP 1 Score: 182.57 bits (462), Expect = 7.390e-49
Identity = 91/188 (48.40%), Postives = 126/188 (67.02%), Query Frame = 2
Query:  104 EGSVRNILEQDSLKWVFXXXXXXXXXXXCSSILSILLAEVRPSVLIISTDPAHNLSDAFQQRFTKTPTLVNGFSNLYAMEVDPSVE---------EETGSTEGMDSLFSELANAIPGIDEAMSFAEMLKLVQTMDYSCIVFDTAPTGHTLRLLQFPSTLEKGLDKMMSLKNKFGGMINQMTRLFGIDD 640
            E ++ NI+EQ SLKW+F           CS  L++ L++ R SVLIISTDPAHN+SDAF Q+F+K PT V G+ NL+AME+DPS+          EE         +  E  +A PGIDEAMS+AE+++LV+ M++S +VFDTAPTGHTLRLL FP+ +E+GL ++M +KN+    I+QM  + G+ D
Sbjct:   25 EPTLSNIIEQRSLKWIFVGGKGGVGKTTCSCSLAVQLSKGRESVLIISTDPAHNISDAFDQKFSKVPTKVKGYDNLFAMEIDPSLGVAELPDEFFEEDNMLSMGKKMMQEAMSAFPGIDEAMSYAEVMRLVKGMNFSVVVFDTAPTGHTLRLLNFPTIVERGLGRLMQIKNQISPFISQMCNMLGLGD 212          

HSP 2 Score: 31.187 bits (69), Expect = 7.390e-49
Identity = 14/30 (46.67%), Postives = 19/30 (63.33%), Query Frame = 3
Query:  654 DALLGRLXXMKDVIERVNKQFKDPDLTTFV 743
            D L  +L     VI  V++QFKDP+ TTF+
Sbjct:  216 DQLASKLEETLPVIRSVSEQFKDPEQTTFI 245          
The following BLAST results are available for this feature:
BLAST of DR406179 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
ASNA_DICDI1.810e-5049.72ATPase ASNA1 homolog OS=Dictyostelium discoideum G... [more]
ASNA_DANRE3.074e-5049.47ATPase asna1 OS=Danio rerio GN=asna1 PE=1 SV=1[more]
GET3_LACBS1.508e-4954.35ATPase GET3 OS=Laccaria bicolor (strain S238N-H82)... [more]
GET3_COCIM1.965e-4952.17ATPase GET3 OS=Coccidioides immitis GN=GET3 PE=3 S... [more]
GET3_SCHPO1.966e-4948.65ATPase get3 OS=Schizosaccharomyces pombe GN=get3 P... [more]
GET3_COCP71.966e-4952.17ATPase GET3 OS=Coccidioides posadasii (strain C735... [more]
ASNA_CAEEL2.561e-4950.25ATPase asna-1 OS=Caenorhabditis elegans GN=asna-1 ... [more]
GET3_SCHJY2.563e-4948.40ATPase get3 OS=Schizosaccharomyces japonicus (stra... [more]
ASNA_MOUSE7.390e-4948.40ATPase Asna1 OS=Mus musculus GN=Asna1 PE=1 SV=2[more]
ASNA_HUMAN7.390e-4948.40ATPase ASNA1 OS=Homo sapiens GN=ASNA1 PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionCSAJ-PNP1248P22 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone CSAJ-PNP1248P22 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR406179 ID=DR406179; Name=DR406179; organism=Citrus sinensis; type=EST; length=745bp
GGGGAGAGAACAAGAGGCAGTGAGTGAGTTGAAAAAGAGGGAAAAAAGAA
AAGAAAAGATGACGGAGGAGGATCAAGATCAAGATCAAGAATTAGAAATT
CCAGAGGGCAGTGTACGGAATATACTAGAACAAGATAGTCTCAAGTGGGT
CTTCGTCGGAGGCAAAGGCGGCGTTGGCAAAACGACATGTAGTTCAATTC
TCTCGATCCTTTTGGCCGAGGTCCGACCTTCTGTCTTGATCATATCCACT
GACCCAGCTCACAATCTCAGCGATGCTTTTCAGCAACGCTTCACCAAAAC
ACCTACTTTAGTCAATGGTTTCTCCAATCTTTATGCCATGGAGGTGGATC
CTAGTGTCGAAGAAGAAACGGGTTCTACCGAGGGAATGGATAGCTTGTTT
TCTGAGCTAGCAAATGCTATTCCCGGTATTGATGAGGCAATGAGCTTTGC
GGAGATGCTCAAATTGGTGCAAACAATGGATTATTCTTGTATAGTATTTG
ATACAGCTCCAACTGGCCATACACTCCGGCTATTACAATTTCCTTCAACC
TTAGAGAAGGGGCTAGACAAAATGATGTCCTTGAAAAATAAATTTGGCGG
CATGATTAATCAGATGACCCGTCTCTTTGGAATTGATGATGANATTTGGG
GAGGATGCTCTCTTAGGAAGGCTTGNNNGNATGAAAGATGTGATTGAACG
AGTTAATAAGCAGTTCAAGGACCCAGACTTGACAACCTTTGTCTG
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