DR406179

Overview
NameDR406179
Unique NameDR406179
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length745
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DR406179_ssr44 microsatellite DR406179_ssr44:44..58. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of DR406179 vs. ExPASy Swiss-Prot
Match: ASNA1_PARTE (ATPase ASNA1 homolog 1 OS=Paramecium tetraurelia GN=GSPATT00033675001 PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.436e-43
Identity = 84/185 (45.41%), Postives = 115/185 (62.16%), Query Frame = 2
Query:  104 EGSVRNILEQDSLKWVFXXXXXXXXXXXCSSILSILLAEVRPSVLIISTDPAHNLSDAFQQRFTKTPTLVNGFSNLYAMEVDPSVEEET---------GSTEGMDSLFSELANAIPGIDEAMSFAEMLKLVQTMDYSCIVFDTAPTGHTLRLLQFPSTLEKGLDKMMSLKNKFGGMINQMTRLFG 631
            E +++N+LE  +LKW+F            SS L+ L A+     +IISTDPAHNLSD F Q+    PT + G  NL AME+DP+V+ +           + +   SL SEL +++PGIDEAMSFAE++  V  M Y  I+FDTAPTGHTLRLL FP+ +EKGL+K++ L+  F  + +Q   LFG
Sbjct:    6 EPTLKNVLENQTLKWIFVGGKGGVGKTTTSSSLATLFAKSGKRTIIISTDPAHNLSDCFDQKIGSQPTQIKGIENLSAMEIDPTVDPDKLKLPTLQGFMNDQATKSLLSELISSVPGIDEAMSFAELMNSVDEMKYDLIIFDTAPTGHTLRLLNFPNIMEKGLNKLVQLRYNFQNLASQFQGLFG 190          

HSP 2 Score: 29.6462 bits (65), Expect = 5.436e-43
Identity = 11/28 (39.29%), Postives = 18/28 (64.29%), Query Frame = 3
Query:  660 LLGRLXXMKDVIERVNKQFKDPDLTTFV 743
            +  ++  MKD + +VN Q KD + TTF+
Sbjct:  202 MFSKIETMKDTVTKVNAQMKDRNKTTFI 229          
BLAST of DR406179 vs. ExPASy Swiss-Prot
Match: ASNA_PLACH (ATPase ASNA1 homolog OS=Plasmodium chabaudi GN=PC000665.03.0 PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.138e-40
Identity = 83/181 (45.86%), Postives = 116/181 (64.09%), Query Frame = 2
Query:   95 EIPEGSVRNILEQDSLKWVFXXXXXXXXXXXCSSILSILLAEVRPSVLIISTDPAHNLSDAFQQRFTKTPTLVNGFSNLYAMEVDPSVEEET----GSTEGMDSLFSELANAIPGIDEAMSFAEMLKLVQTMDYSCIVFDTAPTGHTLRLLQFPSTLEKGLDKMMSLKNKFGGMINQMTRL 625
            E  E ++  ++E  SL W+F            S  ++I LA+ R SVL++STDPAHN SDAF Q+FT  PTL+N F NLY ME+D +  E+T      ++ ++S+  EL  + PGIDEA+ FAE+++ ++ M YS IVFDTAPTGHTLRLL FP  L+K L  +++LK K  G +N +  L
Sbjct:   25 EFYETNLNKLIENTSLNWIFVGGKGGVGKTTTSCSIAIQLAKKRESVLLLSTDPAHNTSDAFNQKFTNKPTLINSFDNLYCMEIDTTFSEDTAFKINKSDFLNSIIPELLQSFPGIDEALCFAELMQSIRNMKYSVIVFDTAPTGHTLRLLAFPDLLKKALGYLINLKEKLKGTLNMLQSL 205          
BLAST of DR406179 vs. ExPASy Swiss-Prot
Match: ASNA_PLAYO (ATPase ASNA1 homolog OS=Plasmodium yoelii yoelii GN=PY02198 PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.940e-40
Identity = 83/181 (45.86%), Postives = 115/181 (63.54%), Query Frame = 2
Query:   95 EIPEGSVRNILEQDSLKWVFXXXXXXXXXXXCSSILSILLAEVRPSVLIISTDPAHNLSDAFQQRFTKTPTLVNGFSNLYAMEVDPSVEEET----GSTEGMDSLFSELANAIPGIDEAMSFAEMLKLVQTMDYSCIVFDTAPTGHTLRLLQFPSTLEKGLDKMMSLKNKFGGMINQMTRL 625
            E  E ++  ++E  SL W+F            S  ++I LA+ R SVL++STDPAHN SDAF Q+FT  PTL+N F NLY ME+D +  E+T      +  ++S+  EL  + PGIDEA+ FAE+++ ++ M YS IVFDTAPTGHTLRLL FP  L+K L  +++LK K  G +N +  L
Sbjct:   25 EFYETNLNKLIENTSLNWIFVGGKGGVGKTTTSCSIAIQLAKKRESVLLLSTDPAHNTSDAFNQKFTNKPTLINSFDNLYCMEIDTTFSEDTAFKINQSNFLNSIIPELLQSFPGIDEALCFAELMQSIKNMKYSVIVFDTAPTGHTLRLLAFPDLLKKALGYLINLKEKLKGTLNMLQSL 205          
BLAST of DR406179 vs. ExPASy Swiss-Prot
Match: ASNA_THEPA (ATPase ASNA1 homolog OS=Theileria parva GN=TP03_0142 PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 2.391e-40
Identity = 83/166 (50.00%), Postives = 113/166 (68.07%), Query Frame = 2
Query:  113 VRNILEQDSLKWVFXXXXXXXXXXXCSSILSILLAEVRPSVLIISTDPAHNLSDAFQQRFTKTPTLVNGFSNLYAMEVDPSVEEETG----STEGMDSLFSELANAIPGIDEAMSFAEMLKLVQTMDYSCIVFDTAPTGHTLRLLQFPSTLEKGLDKMMSLKNKFG 598
            V+N++EQ++ KW+F            S  LS +L+E R SVL++STDPAH+LSDAF Q+FT TPTLVNG+ NLYAME+D +   +TG     T+       EL   +PGIDEA+SF+E+L+ VQ+M YS IVFDTAPTGHTL+ L  P TL+K L+  + +++  G
Sbjct:   18 VKNLVEQETYKWIFVGGKGGVGKTTISCSLSSILSERRESVLLLSTDPAHSLSDAFNQKFTDTPTLVNGYENLYAMELDVTRVADTGFGLNETKMFLQTIPELFQMLPGIDEALSFSELLQSVQSMKYSVIVFDTAPTGHTLKFLNLPDTLDKLLESFLKVESLCG 183          

HSP 2 Score: 23.8682 bits (50), Expect = 2.391e-40
Identity = 10/31 (32.26%), Postives = 17/31 (54.84%), Query Frame = 3
Query:  651 EDALLGRLXXMKDVIERVNKQFKDPDLTTFV 743
            ++ +  +L   K  +  +  Q KDP+ TTFV
Sbjct:  198 KEEIFQKLKRFKSNLTLIMNQMKDPNRTTFV 228          
BLAST of DR406179 vs. ExPASy Swiss-Prot
Match: ASNA_PLAKH (ATPase ASNA1 homolog OS=Plasmodium knowlesi (strain H) GN=PKH_051870 PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.534e-40
Identity = 82/173 (47.40%), Postives = 111/173 (64.16%), Query Frame = 2
Query:  110 SVRNILEQDSLKWVFXXXXXXXXXXXCSSILSILLAEVRPSVLIISTDPAHNLSDAFQQRFTKTPTLVNGFSNLYAMEVDPSVEEETG----STEGMDSLFSELANAIPGIDEAMSFAEMLKLVQTMDYSCIVFDTAPTGHTLRLLQFPSTLEKGLDKMMSLKNKFGGMINQM 616
            ++  +LE  +L W+F            S  +++ LA+ R SVL++STDPAHN SDAF Q+FT  PTL+N F NLY ME+D +  E T      TE  DS+  EL  + PGIDEA+ FAE+++ ++ M YS IVFDTAPTGHTLRLL FP  L+K L  ++SL+ K  G +N +
Sbjct:   26 NLSKLLENKTLNWIFVGGKGGVGKTTTSCSIAVQLAKRRESVLLLSTDPAHNTSDAFNQKFTNQPTLINSFDNLYCMEIDTTYSENTAFKLNKTEFFDSIIPELLQSFPGIDEALCFAELMQSIKNMKYSVIVFDTAPTGHTLRLLAFPELLKKALGYLISLREKLKGTLNML 198          
BLAST of DR406179 vs. ExPASy Swiss-Prot
Match: ASNA_PLABE (ATPase ASNA1 homolog OS=Plasmodium berghei GN=PB000618.02.0 PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 9.630e-40
Identity = 82/181 (45.30%), Postives = 115/181 (63.54%), Query Frame = 2
Query:   95 EIPEGSVRNILEQDSLKWVFXXXXXXXXXXXCSSILSILLAEVRPSVLIISTDPAHNLSDAFQQRFTKTPTLVNGFSNLYAMEVDPSVEEET----GSTEGMDSLFSELANAIPGIDEAMSFAEMLKLVQTMDYSCIVFDTAPTGHTLRLLQFPSTLEKGLDKMMSLKNKFGGMINQMTRL 625
            E  E ++  ++E  SL W+F            S  ++I LA+ R SVL++STDPAHN SDAF Q+FT  PTL+N F NLY ME+D +  E+T      ++  +S+  EL  + PGIDEA+ FAE+++ ++ M YS IVFDTAPTGHTLRLL FP  L+K L  +++LK K  G ++ +  L
Sbjct:   25 EYYETNLNKLIENTSLNWIFVGGKGGVGKTTTSCSIAIQLAKKRESVLLLSTDPAHNTSDAFNQKFTNKPTLINSFDNLYCMEIDTTFSEDTAFKINKSDFFNSIIPELLQSFPGIDEALCFAELMQSIKNMKYSVIVFDTAPTGHTLRLLAFPDLLKKALGYLINLKEKLKGTLSMLQSL 205          
BLAST of DR406179 vs. ExPASy Swiss-Prot
Match: ASNA_BABBO (ATPase ASNA1 homolog OS=Babesia bovis GN=BBOV_I001930 PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.170e-39
Identity = 79/171 (46.20%), Postives = 112/171 (65.50%), Query Frame = 2
Query:  113 VRNILEQDSLKWVFXXXXXXXXXXXCSSILSILLAEVRPSVLIISTDPAHNLSDAFQQRFTKTPTLVNGFSNLYAMEVDPSVEEETGSTEGMDSLFSELANA------IPGIDEAMSFAEMLKLVQTMDYSCIVFDTAPTGHTLRLLQFPSTLEKGLDKMMSLKNKFGGMI 607
            ++N++ Q +L+WVF            SS ++  LAE R SVL++STDPAH+LSDAF Q+FT  P LVNGF+NLYAME++ S  +     +G+    S L N       +PGIDEA+SF E+++ VQ+  +S  +FDTAPTGHTL+ L+ P  LEK LD ++ L+N  GG++
Sbjct:   18 IQNLVNQKTLQWVFVGGKGGVGKTTISSSIATALAETRESVLLLSTDPAHSLSDAFGQKFTHEPRLVNGFTNLYAMELNTS--QIIDGLDGLRETHSFLKNVPDILMMLPGIDEALSFVELMQSVQSRRFSVTIFDTAPTGHTLKFLKLPDVLEKILDSLLKLENTMGGLL 186          

HSP 2 Score: 30.0314 bits (66), Expect = 1.170e-39
Identity = 11/31 (35.48%), Postives = 21/31 (67.74%), Query Frame = 3
Query:  651 EDALLGRLXXMKDVIERVNKQFKDPDLTTFV 743
            ++ L  ++  + D+I   ++Q K+PDLTTF+
Sbjct:  199 QNELFDKIKLLGDMINTTHEQMKNPDLTTFI 229          
BLAST of DR406179 vs. ExPASy Swiss-Prot
Match: ASNA_PLAVI (ATPase ASNA1 homolog OS=Plasmodium vivax GN=PVX_089705 PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.258e-39
Identity = 80/173 (46.24%), Postives = 111/173 (64.16%), Query Frame = 2
Query:  110 SVRNILEQDSLKWVFXXXXXXXXXXXCSSILSILLAEVRPSVLIISTDPAHNLSDAFQQRFTKTPTLVNGFSNLYAMEVDPSVEEETG----STEGMDSLFSELANAIPGIDEAMSFAEMLKLVQTMDYSCIVFDTAPTGHTLRLLQFPSTLEKGLDKMMSLKNKFGGMINQM 616
            ++  +LE  +L W+F            S  +++ LA+ R SVL++STDPAHN SDAF Q+FT  PTL+N F NLY ME+D +  E T      TE  D++  EL  + PGIDEA+ FAE+++ ++ M YS IVFDTAPTGHTLRLL FP  L+K L  +++L+ K  G +N +
Sbjct:   26 NLSKLLENKTLNWIFVGGKGGVGKTTTSCSIAVQLAKRRESVLLLSTDPAHNTSDAFNQKFTNQPTLINSFDNLYCMEIDTTYSENTAFKLNKTEFFDNIIPELLQSFPGIDEALCFAELMQSIKNMKYSVIVFDTAPTGHTLRLLAFPELLKKALGYLINLREKLKGTLNML 198          
BLAST of DR406179 vs. ExPASy Swiss-Prot
Match: ASNA_GIALA (ATPase ASNA1 homolog OS=Giardia lamblia GN=GL50803_7953 PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 7.456e-39
Identity = 85/205 (41.46%), Postives = 119/205 (58.05%), Query Frame = 2
Query:  110 SVRNILEQDSLKWVFXXXXXXXXXXXCSSILSILLAEVRPS--VLIISTDPAHNLSDAFQQRFTKTPTLVNGFSNLYAMEVDPS---------VEEETGSTEGMDS-------LFSELANAI------------PGIDEAMSFAEMLKLVQTMDYSCIVFDTAPTGHTLRLLQFPSTLEKGLDKMMSLKNKFGGMINQMTRLFGI 634
            S+ +IL+Q + KW+F            SS  S+L+AE RP+   L++STDPAHN+SDAF Q+F K PT V+G  NLYAMEVD S         V++ETGS    D+       +F  L + I            PG+DE  SF  ++KL+ T +YS ++FDTAPTGHTLR L+ P T+ K L+    LK+  GGM++ + +  G+
Sbjct:    4 SLHDILDQHTYKWIFFGGKGGVGKTTTSSSFSVLMAETRPNEKFLLLSTDPAHNISDAFDQKFGKAPTQVSGIPNLYAMEVDASNEMKSAVEAVQKETGSAADNDAESKSEGDMFGGLNDLITCASSFIKDGTFPGMDEMWSFINLIKLIDTNEYSTVIFDTAPTGHTLRFLELPETVNKVLEIFTRLKDNMGGMLSMVMQTMGL 208          

HSP 2 Score: 28.8758 bits (63), Expect = 7.456e-39
Identity = 10/19 (52.63%), Postives = 16/19 (84.21%), Query Frame = 3
Query:  687 DVIERVNKQFKDPDLTTFV 743
            DV++R++ +F+DP L TFV
Sbjct:  225 DVVKRISAEFRDPSLCTFV 243          
BLAST of DR406179 vs. ExPASy Swiss-Prot
Match: ASNA_PLAF7 (ATPase ASNA1 homolog OS=Plasmodium falciparum (isolate 3D7) GN=PFD0725c PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 8.152e-39
Identity = 77/171 (45.03%), Postives = 111/171 (64.91%), Query Frame = 2
Query:  110 SVRNILEQDSLKWVFXXXXXXXXXXXCSSILSILLAEVRPSVLIISTDPAHNLSDAFQQRFTKTPTLVNGFSNLYAMEVDPSVEEETG----STEGMDSLFSELANAIPGIDEAMSFAEMLKLVQTMDYSCIVFDTAPTGHTLRLLQFPSTLEKGLDKMMSLKNKFGGMIN 610
            ++  ++E +SL W+F            S  +++ L++ R SVL++STDPAHN SDAF Q+FT  PTL+N F NLY ME+D +  E T       E  D++  EL ++ PGIDEA+ FAE+++ ++ M YS IVFDTAPTGHTLRLL FP  L+K L  +++++ K  G +N
Sbjct:   28 NLNKLIENESLNWIFVGGKGGVGKTTTSCSIAVQLSKRRESVLLLSTDPAHNTSDAFNQKFTNQPTLINSFDNLYCMEIDTNYSENTAFKLNKKEMFDNILPELLHSFPGIDEALCFAELMQSIKNMKYSVIVFDTAPTGHTLRLLAFPDLLKKALGYLINIREKLKGTLN 198          
The following BLAST results are available for this feature:
BLAST of DR406179 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
ASNA1_PARTE5.436e-4345.41ATPase ASNA1 homolog 1 OS=Paramecium tetraurelia G... [more]
ASNA_PLACH1.138e-4045.86ATPase ASNA1 homolog OS=Plasmodium chabaudi GN=PC0... [more]
ASNA_PLAYO1.940e-4045.86ATPase ASNA1 homolog OS=Plasmodium yoelii yoelii G... [more]
ASNA_THEPA2.391e-4050.00ATPase ASNA1 homolog OS=Theileria parva GN=TP03_01... [more]
ASNA_PLAKH2.534e-4047.40ATPase ASNA1 homolog OS=Plasmodium knowlesi (strai... [more]
ASNA_PLABE9.630e-4045.30ATPase ASNA1 homolog OS=Plasmodium berghei GN=PB00... [more]
ASNA_BABBO1.170e-3946.20ATPase ASNA1 homolog OS=Babesia bovis GN=BBOV_I001... [more]
ASNA_PLAVI1.258e-3946.24ATPase ASNA1 homolog OS=Plasmodium vivax GN=PVX_08... [more]
ASNA_GIALA7.456e-3941.46ATPase ASNA1 homolog OS=Giardia lamblia GN=GL50803... [more]
ASNA_PLAF78.152e-3945.03ATPase ASNA1 homolog OS=Plasmodium falciparum (iso... [more]

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Properties
Property NameValue
Genbank descriptionCSAJ-PNP1248P22 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone CSAJ-PNP1248P22 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR406179 ID=DR406179; Name=DR406179; organism=Citrus sinensis; type=EST; length=745bp
GGGGAGAGAACAAGAGGCAGTGAGTGAGTTGAAAAAGAGGGAAAAAAGAA
AAGAAAAGATGACGGAGGAGGATCAAGATCAAGATCAAGAATTAGAAATT
CCAGAGGGCAGTGTACGGAATATACTAGAACAAGATAGTCTCAAGTGGGT
CTTCGTCGGAGGCAAAGGCGGCGTTGGCAAAACGACATGTAGTTCAATTC
TCTCGATCCTTTTGGCCGAGGTCCGACCTTCTGTCTTGATCATATCCACT
GACCCAGCTCACAATCTCAGCGATGCTTTTCAGCAACGCTTCACCAAAAC
ACCTACTTTAGTCAATGGTTTCTCCAATCTTTATGCCATGGAGGTGGATC
CTAGTGTCGAAGAAGAAACGGGTTCTACCGAGGGAATGGATAGCTTGTTT
TCTGAGCTAGCAAATGCTATTCCCGGTATTGATGAGGCAATGAGCTTTGC
GGAGATGCTCAAATTGGTGCAAACAATGGATTATTCTTGTATAGTATTTG
ATACAGCTCCAACTGGCCATACACTCCGGCTATTACAATTTCCTTCAACC
TTAGAGAAGGGGCTAGACAAAATGATGTCCTTGAAAAATAAATTTGGCGG
CATGATTAATCAGATGACCCGTCTCTTTGGAATTGATGATGANATTTGGG
GAGGATGCTCTCTTAGGAAGGCTTGNNNGNATGAAAGATGTGATTGAACG
AGTTAATAAGCAGTTCAAGGACCCAGACTTGACAACCTTTGTCTG
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