DR406179

Overview
NameDR406179
Unique NameDR406179
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length745
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DR406179_ssr44 microsatellite DR406179_ssr44:44..58. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of DR406179 vs. ExPASy Swiss-Prot
Match: GET3_DEBHA (ATPase GET3 OS=Debaryomyces hansenii GN=GET3 PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 3.529e-35
Identity = 80/195 (41.03%), Postives = 109/195 (55.90%), Query Frame = 2
Query:  104 EGSVRNILEQDSLKWVFXXXXXXXXXXXCSSILSILLAEVRPS--VLIISTDPAHNLSDAFQQRFTKTPTLVNGFSNLYAMEVDPSV----------EEETGSTEGMDSLFSELANAIPGIDEAMSFAEMLKLVQT------------MDYSCIVFDTAPTGHTLRLLQFPSTLEKGLDKMMSLKNKFGGMINQM 616
            E ++ +I++ DSLKW+F            SS +++ LA  +P+   L+ISTDPAHNLSDAF Q+F K    V G  NL  ME+DP            +      + + S+ S++  +IPGIDEA+SF E+LK ++             + Y  I+FDTAPTGHTLR LQ PSTLEK L K   L  K G M++ M
Sbjct:    6 EPTLESIVQHDSLKWIFVGGKGGVGKTTTSSSVAVQLALAQPNEQFLLISTDPAHNLSDAFCQKFGKDARKVEGLPNLSCMEIDPEAAMSDLQQQASQYNNDPNDPLKSMMSDMTGSIPGIDEALSFMEVLKHIKNQKVLEGEDNSNAISYKTIIFDTAPTGHTLRFLQLPSTLEKLLSKFKDLSGKLGPMLSMM 200          

HSP 2 Score: 28.1054 bits (61), Expect = 3.529e-35
Identity = 12/39 (30.77%), Postives = 23/39 (58.97%), Query Frame = 3
Query:  627 LELMMXFGEDALLGRLXXMKDVIERVNKQFKDPDLTTFV 743
            L +M    +  +  +L  ++  +  VN+QF +P+LTTF+
Sbjct:  197 LSMMGGGQQQDIFEKLNEVQKNVSEVNEQFTNPELTTFI 235          
BLAST of DR406179 vs. ExPASy Swiss-Prot
Match: GET3_KLULA (ATPase GET3 OS=Kluyveromyces lactis GN=GET3 PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 1.723e-34
Identity = 77/201 (38.31%), Postives = 107/201 (53.23%), Query Frame = 2
Query:  104 EGSVRNILEQDSLKWVFXXXXXXXXXXX--CSSILSILLAEVRPSVLIISTDPAHNLSDAFQQRFTKTPTLVNGFSNLYAMEVDPS-----------VEEETGSTEGMDSL----FSELANAIPGIDEAMSFAEMLKLVQTMD------YSCIVFDTAPTGHTLRLLQFPSTLEKGLDKMMSLKNKFGGMINQMTRLFGID 637
            E  + +++   + +W+F             CS  + + LA+     L+ISTDPAHNLSDAF ++F K    V G +NL  ME+DPS               TGS E  D L     SEL  +IPGIDEA+SF E++K ++  +      Y  ++FDTAPTGHTLR LQ PSTL K L+K   +  + G M+N +     +D
Sbjct:    6 EPDLNSLITSSTHRWIFVGGKGGVGKTTSSCSIAIQMALAQPEKQYLLISTDPAHNLSDAFGEKFGKDARKVTGMNNLSCMEIDPSAALKDMNDMAVANNATGSGEFSDLLQGGALSELTGSIPGIDEALSFMEVMKHIKNQEQGEGDRYDTVIFDTAPTGHTLRFLQLPSTLSKLLEKFGEITARLGPMLNSLAGANNVD 206          

HSP 2 Score: 34.2686 bits (77), Expect = 1.723e-34
Identity = 12/28 (42.86%), Postives = 22/28 (78.57%), Query Frame = 3
Query:  660 LLGRLXXMKDVIERVNKQFKDPDLTTFV 743
            L+G++  +K  +E++ +QF +PD+TTFV
Sbjct:  207 LVGKMSELKSNVEKIKEQFTNPDMTTFV 234          
BLAST of DR406179 vs. ExPASy Swiss-Prot
Match: GET3_LACTC (ATPase GET3 OS=Lachancea thermotolerans (strain CBS 6340) GN=GET3 PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.858e-33
Identity = 73/196 (37.24%), Postives = 105/196 (53.57%), Query Frame = 2
Query:   98 IPEGSVRNILEQDSLKWVFXXXXXXXXXXX--CSSILSILLAEVRPSVLIISTDPAHNLSDAFQQRFTKTPTLVNGFSNLYAMEVDPSVE---------EETGSTEGMDSL-----FSELANAIPGIDEAMSFAEMLKLVQTMD------YSCIVFDTAPTGHTLRLLQFPSTLEKGLDKMMSLKNKFGGMINQMT 619
            I E +++ ++   + KW+F             CS  + + LA+ +   L+ISTDPAHNLSDAF ++F K    V G  NL  ME+DPS            +    +G   L      +EL  +IPGIDEA+SF E++K ++  +      Y  ++FDTAPTGHTLR LQ P TL + L K   +  +FG M+N +T
Sbjct:    4 IAEPNLKELINSTTHKWIFVGGKGGVGKTTSSCSISIQMALAQPKKQFLLISTDPAHNLSDAFGEKFGKDARKVTGMDNLSCMEIDPSAALKDMNDMSVAQNDKNDGFSDLLQGGGLAELTGSIPGIDEALSFMEVMKHIKRQEEGEGEKYDTVIFDTAPTGHTLRFLQLPQTLSQLLQKFGEIAGRFGPMLNSLT 199          

HSP 2 Score: 32.7278 bits (73), Expect = 1.858e-33
Identity = 11/28 (39.29%), Postives = 22/28 (78.57%), Query Frame = 3
Query:  660 LLGRLXXMKDVIERVNKQFKDPDLTTFV 743
            ++G++  +K  +E++ +QF +PD+TTFV
Sbjct:  207 IMGKVDELKANVEKIREQFTNPDMTTFV 234          
BLAST of DR406179 vs. ExPASy Swiss-Prot
Match: GET3_VANPO (ATPase GET3 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=GET3 PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 4.105e-33
Identity = 73/202 (36.14%), Postives = 107/202 (52.97%), Query Frame = 2
Query:  110 SVRNILEQDSLKWVFXXXXXXXXXXXCSSILSILLAEVRPS--VLIISTDPAHNLSDAFQQRFTKTPTLVNGFSNLYAMEVDPS----------VEEETGSTEGMDSL--------FSELANAIPGIDEAMSFAEMLKLVQTMD------YSCIVFDTAPTGHTLRLLQFPSTLEKGLDKMMSLKNKFGGMINQMTRLFGID 637
            ++ +++   + +W+F            S  ++I +A  +PS   L+ISTDPAHNLSDAF ++F K    V G  NL  ME+DPS          V     +  G D L         ++L  +IPGIDEA+SF E++K ++  +      Y  ++FDTAPTGHTLR LQ P+TL K L+K   +  K G M+N +     +D
Sbjct:    8 NLHSLINSTTHRWIFVGGKGGVGKTTSSCSIAIQMALSQPSKQFLLISTDPAHNLSDAFGEKFGKDARKVTGMDNLSCMEIDPSAALNDMNDMAVSRANENGNGGDGLSDILQGGALADLTGSIPGIDEALSFMEVMKHIKNQENGEGDRYDTVIFDTAPTGHTLRFLQLPNTLSKLLEKFGEITGKLGPMLNSLAGAGNVD 209          

HSP 2 Score: 36.965 bits (84), Expect = 4.105e-33
Identity = 15/32 (46.88%), Postives = 23/32 (71.88%), Query Frame = 3
Query:  648 GEDALLGRLXXMKDVIERVNKQFKDPDLTTFV 743
            G   + G+L  +K+ +E++ +QF DPDLTTFV
Sbjct:  206 GNVDISGKLNELKENVEKIRQQFTDPDLTTFV 237          
BLAST of DR406179 vs. ExPASy Swiss-Prot
Match: GET3_ZYGRC (ATPase GET3 OS=Zygosaccharomyces rouxii (strain ATCC 2623 / CBS 732 / IFO 1130 / NBRC 1623 / NCYC 568) GN=GET3 PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 1.538e-32
Identity = 73/207 (35.27%), Postives = 110/207 (53.14%), Query Frame = 2
Query:   98 IPEGSVRNILEQDSLKWVFXXXXXXXXXXXCSSILSILLAEVRP--SVLIISTDPAHNLSDAFQQRFTKTPTLVNGFSNLYAMEVDPSV-----------EEETGSTEGMDSL--------FSELANAIPGIDEAMSFAEMLKLVQTMD------YSCIVFDTAPTGHTLRLLQFPSTLEKGLDKMMSLKNKFGGMINQMTRLFGID 637
            + E ++ +++   + KW+F            S  ++I +A+ +P    L+ISTDPAHNLSDAF ++F K    V G +NL  ME+DPS            +      +G D L         +EL  +IPGIDEA+SF E++K ++  +      Y  ++FDTAPTGHTLR LQ P+TL K L+K   +  + G M+N +     +D
Sbjct:    4 VVEPNLHSLINSSTHKWIFVGGKGGVGKTTSSCSIAIQMAQSQPHKQFLLISTDPAHNLSDAFGEKFGKDARRVTGMNNLSCMEIDPSAALKDMNDMAVSQANENGAQGDDGLGGLLQGGALAELTGSIPGIDEALSFMEVMKHIKNQEKGEGERYDTVIFDTAPTGHTLRFLQLPNTLSKLLEKFGEITGRLGPMLNSLAGAGNVD 210          

HSP 2 Score: 30.8018 bits (68), Expect = 1.538e-32
Identity = 12/25 (48.00%), Postives = 18/25 (72.00%), Query Frame = 3
Query:  669 RLXXMKDVIERVNKQFKDPDLTTFV 743
            +L  +K+ +E +  QF +PDLTTFV
Sbjct:  214 KLNQLKESVETIKDQFTNPDLTTFV 238          
BLAST of DR406179 vs. ExPASy Swiss-Prot
Match: ASNA_ENTHI (ATPase ASNA1 homolog OS=Entamoeba histolytica GN=EHI_177400 PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.663e-31
Identity = 76/195 (38.97%), Postives = 111/195 (56.92%), Query Frame = 2
Query:  101 PEGSVRNILEQDSLKWVFXXXXXXXXXXXCSSILSILLAEVRPS--VLIISTDPAHNLSDAFQQRFTKTPTLVNGFSNLYAMEVDPSV-------EEETGSTE-GMDSLFSELAN------AIPGIDEAMSFAEMLKLVQTMDYSCIVFDTAPTGHTLRLLQFPSTLEKGLDKMMSLKNKFGGMINQMTRLFGID 637
            P  ++ +I+   +LKWVF            S  L +L+A+  P   VLIISTDPAHN SDAF  +F   P +V G  NL  ME+D          E E G+ + G   L SEL        ++PGIDEA++F++++   Q M+Y  ++FDTAPTGHTLR L  P+ L   L+K++ L++ FG M++Q   + G++
Sbjct:    5 PPNNLEHIITSQTLKWVFVGGKGGVGKTTTSCSLGVLIADRNPQKKVLIISTDPAHNTSDAFDIKFGAEPKVVPGVPNLSVMEIDVKDAMKGVFDESEQGTNQNGGFGLLSELTGMMGMLKSVPGIDEAIAFSQIINQAQQMNYDLVLFDTAPTGHTLRFLSLPTLLRDMLEKVIKLQDSFGPMMSQFGGMMGMN 199          

HSP 2 Score: 22.7126 bits (47), Expect = 3.663e-31
Identity = 10/35 (28.57%), Postives = 19/35 (54.29%), Query Frame = 3
Query:  639 MXFGEDALLGRLXXMKDVIERVNKQFKDPDLTTFV 743
            M    + L  ++  M    E++ + F +P+LTTF+
Sbjct:  198 MNINFNELKPKMEHMLKTSEQIVEDFTNPNLTTFI 232          
BLAST of DR406179 vs. ExPASy Swiss-Prot
Match: ASNA_ENTDI (ATPase ASNA1 homolog OS=Entamoeba dispar GN=EDI_044870 PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.371e-30
Identity = 77/194 (39.69%), Postives = 105/194 (54.12%), Query Frame = 2
Query:  101 PEGSVRNILEQDSLKWVFXXXXXXXXXXXCSSILSILLAEVRPS--VLIISTDPAHNLSDAFQQRFTKTPTLVNGFSNLYAMEVD---------PSVEEETGSTEGMDSLFSELAN------AIPGIDEAMSFAEMLKLVQTMDYSCIVFDTAPTGHTLRLLQFPSTLEKGLDKMMSLKNKFGGMINQMTRLFG 631
            P  ++ +I+   +LKWVF            S  L +L+A   P   VLIISTDPAHN SDAF  +F   P  V G  NL  MEVD           VE+ T    G   L SE+        ++PGIDEA++F++++   Q M+Y  ++FDTAPTGHTLR L  PS L   L+K++ L+  FG M++Q   + G
Sbjct:    5 PPNNLEHIITSQTLKWVFVGGKGGVGKTTTSCSLGVLIANRNPQKKVLIISTDPAHNTSDAFDIKFGAEPKAVPGVPNLSVMEVDVKDAMKGMFDGVEQGTNQN-GEFGLLSEITGMVGMFKSVPGIDEAIAFSKIINQAQQMNYDLVLFDTAPTGHTLRFLSLPSVLRDMLEKVIKLQELFGPMMSQFGGIIG 197          

HSP 2 Score: 23.8682 bits (50), Expect = 1.371e-30
Identity = 9/25 (36.00%), Postives = 16/25 (64.00%), Query Frame = 3
Query:  669 RLXXMKDVIERVNKQFKDPDLTTFV 743
            ++  M    E++ K F +P+LTTF+
Sbjct:  208 KMEDMLKTSEQIVKDFTNPNLTTFI 232          
BLAST of DR406179 vs. ExPASy Swiss-Prot
Match: GET3_CANGA (ATPase GET3 OS=Candida glabrata GN=GET3 PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.856e-29
Identity = 73/202 (36.14%), Postives = 107/202 (52.97%), Query Frame = 2
Query:  104 EGSVRNILEQDSLKWVFXXXXXXXXXXX--CSSILSILLAEVRPSVLIISTDPAHNLSDAFQQRFTKTPTLVNGFSNLYAMEVDPS--------VEEETGSTEGMDSL--------FSELANAIPGIDEAMSFAEMLKLVQTMD------YSCIVFDTAPTGHTLRLLQFPSTLEKGLDKMMSLKNKFGGMINQMTRLFGID 637
            E ++++++   + KW+F             CS  + + LA+     L+ISTDPAHNLSDAF ++F K    V G  NL  ME+DPS        +   +    G D L         ++L  +IPGIDEA+SF E++K ++  +      +  ++FDTAPTGHTLR LQ P+TL K LDK   +  + G M+N M     +D
Sbjct:    6 EPNLKSLITSSTHKWIFVGGKGGVGKTTSSCSIAIQMALAQPHKKFLLISTDPAHNLSDAFGEKFDKDARKVTGMDNLSCMEIDPSAALKDMNDMAVSSAGENGNDDLGGLLQGGALADLTGSIPGIDEALSFMEVMKHIKKQEQGDGESFDTVIFDTAPTGHTLRFLQLPTTLSKLLDKFSEITGRLGPMLNSMMGSGNVD 207          
BLAST of DR406179 vs. ExPASy Swiss-Prot
Match: GET3_YEAST (ATPase GET3 OS=Saccharomyces cerevisiae GN=GET3 PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.442e-27
Identity = 73/206 (35.44%), Postives = 106/206 (51.46%), Query Frame = 2
Query:  104 EGSVRNILEQDSLKWVFXXXXXXXXXXX--CSSILSILLAEVRPSVLIISTDPAHNLSDAFQQRFTKTPTLVNGFSNLYAMEVDPSV------------EEETGSTEGMDSL--------FSELANAIPGIDEAMSFAEMLKLVQTMD------YSCIVFDTAPTGHTLRLLQFPSTLEKGLDKMMSLKNKFGGMINQMTRLFGID 637
            E ++ +++   + KW+F             CS  + + L++     L+ISTDPAHNLSDAF ++F K    V G +NL  ME+DPS                 GS    D L         ++L  +IPGIDEA+SF E++K ++  +      +  ++FDTAPTGHTLR LQ P+TL K L+K   + NK G M+N       +D
Sbjct:    6 EPNLHSLITSTTHKWIFVGGKGGVGKTTSSCSIAIQMALSQPNKQFLLISTDPAHNLSDAFGEKFGKDARKVTGMNNLSCMEIDPSAALKDMNDMAVSRANNNGSDGQGDDLGSLLQGGALADLTGSIPGIDEALSFMEVMKHIKRQEQGEGETFDTVIFDTAPTGHTLRFLQLPNTLSKLLEKFGEITNKLGPMLNSFMGAGNVD 211          
BLAST of DR406179 vs. ExPASy Swiss-Prot
Match: GET3_YEAS7 (ATPase GET3 OS=Saccharomyces cerevisiae (strain YJM789) GN=GET3 PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.442e-27
Identity = 73/206 (35.44%), Postives = 106/206 (51.46%), Query Frame = 2
Query:  104 EGSVRNILEQDSLKWVFXXXXXXXXXXX--CSSILSILLAEVRPSVLIISTDPAHNLSDAFQQRFTKTPTLVNGFSNLYAMEVDPSV------------EEETGSTEGMDSL--------FSELANAIPGIDEAMSFAEMLKLVQTMD------YSCIVFDTAPTGHTLRLLQFPSTLEKGLDKMMSLKNKFGGMINQMTRLFGID 637
            E ++ +++   + KW+F             CS  + + L++     L+ISTDPAHNLSDAF ++F K    V G +NL  ME+DPS                 GS    D L         ++L  +IPGIDEA+SF E++K ++  +      +  ++FDTAPTGHTLR LQ P+TL K L+K   + NK G M+N       +D
Sbjct:    6 EPNLHSLITSTTHKWIFVGGKGGVGKTTSSCSIAIQMALSQPNKQFLLISTDPAHNLSDAFGEKFGKDARKVTGMNNLSCMEIDPSAALKDMNDMAVSRANNNGSDGQGDDLGSLLQGGALADLTGSIPGIDEALSFMEVMKHIKRQEQGEGETFDTVIFDTAPTGHTLRFLQLPNTLSKLLEKFGEITNKLGPMLNSFMGAGNVD 211          
The following BLAST results are available for this feature:
BLAST of DR406179 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
GET3_DEBHA3.529e-3541.03ATPase GET3 OS=Debaryomyces hansenii GN=GET3 PE=1 ... [more]
GET3_KLULA1.723e-3438.31ATPase GET3 OS=Kluyveromyces lactis GN=GET3 PE=3 S... [more]
GET3_LACTC1.858e-3337.24ATPase GET3 OS=Lachancea thermotolerans (strain CB... [more]
GET3_VANPO4.105e-3336.14ATPase GET3 OS=Vanderwaltozyma polyspora (strain A... [more]
GET3_ZYGRC1.538e-3235.27ATPase GET3 OS=Zygosaccharomyces rouxii (strain AT... [more]
ASNA_ENTHI3.663e-3138.97ATPase ASNA1 homolog OS=Entamoeba histolytica GN=E... [more]
ASNA_ENTDI1.371e-3039.69ATPase ASNA1 homolog OS=Entamoeba dispar GN=EDI_04... [more]
GET3_CANGA5.856e-2936.14ATPase GET3 OS=Candida glabrata GN=GET3 PE=3 SV=1[more]
GET3_YEAST1.442e-2735.44ATPase GET3 OS=Saccharomyces cerevisiae GN=GET3 PE... [more]
GET3_YEAS71.442e-2735.44ATPase GET3 OS=Saccharomyces cerevisiae (strain YJ... [more]

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Properties
Property NameValue
Genbank descriptionCSAJ-PNP1248P22 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone CSAJ-PNP1248P22 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR406179 ID=DR406179; Name=DR406179; organism=Citrus sinensis; type=EST; length=745bp
GGGGAGAGAACAAGAGGCAGTGAGTGAGTTGAAAAAGAGGGAAAAAAGAA
AAGAAAAGATGACGGAGGAGGATCAAGATCAAGATCAAGAATTAGAAATT
CCAGAGGGCAGTGTACGGAATATACTAGAACAAGATAGTCTCAAGTGGGT
CTTCGTCGGAGGCAAAGGCGGCGTTGGCAAAACGACATGTAGTTCAATTC
TCTCGATCCTTTTGGCCGAGGTCCGACCTTCTGTCTTGATCATATCCACT
GACCCAGCTCACAATCTCAGCGATGCTTTTCAGCAACGCTTCACCAAAAC
ACCTACTTTAGTCAATGGTTTCTCCAATCTTTATGCCATGGAGGTGGATC
CTAGTGTCGAAGAAGAAACGGGTTCTACCGAGGGAATGGATAGCTTGTTT
TCTGAGCTAGCAAATGCTATTCCCGGTATTGATGAGGCAATGAGCTTTGC
GGAGATGCTCAAATTGGTGCAAACAATGGATTATTCTTGTATAGTATTTG
ATACAGCTCCAACTGGCCATACACTCCGGCTATTACAATTTCCTTCAACC
TTAGAGAAGGGGCTAGACAAAATGATGTCCTTGAAAAATAAATTTGGCGG
CATGATTAATCAGATGACCCGTCTCTTTGGAATTGATGATGANATTTGGG
GAGGATGCTCTCTTAGGAAGGCTTGNNNGNATGAAAGATGTGATTGAACG
AGTTAATAAGCAGTTCAAGGACCCAGACTTGACAACCTTTGTCTG
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