DR406173

Overview
NameDR406173
Unique NameDR406173
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length721
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6302 contig Csv1_Contig6302:1..721. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR406173 vs. ExPASy Swiss-Prot
Match: CANB_KLULA (Calcineurin subunit B OS=Kluyveromyces lactis GN=CNB1 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.346e-16
Identity = 43/142 (30.28%), Postives = 84/142 (59.15%), Query Frame = 2
Query:  311 MGTASSMLTQYDIEEVQQHCHNLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVD-----GLNFKDFVAFLSVFSAKASMQQKVQLIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVL 721
            MG A S +    +++        F + EI  L +RF +LD+++ G I   EF+S+P  + NPL++R++++ D      ++F++F+  LS+FS +     K++  F++YD D +G +S  ++  VL+ + G+ + DEQ +Q++
Sbjct:    1 MGAAPSRIVDNLLDDTN------FDRAEIERLKKRFMKLDKDSSGSIDKTEFMSIPGVSANPLAKRIIEVFDEDNSGDVDFQEFITSLSIFSGRGETDAKLRFAFRIYDIDKDGYISNGELFIVLKIMVGTNLEDEQLQQIV 136          
BLAST of DR406173 vs. ExPASy Swiss-Prot
Match: CANB_DEBHA (Calcineurin subunit B OS=Debaryomyces hansenii GN=CNB1 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.346e-16
Identity = 46/142 (32.39%), Postives = 82/142 (57.75%), Query Frame = 2
Query:  311 MGTASSMLTQYDIEEVQQHCHNLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDG-----LNFKDFVAFLSVFSAKASMQQKVQLIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVL 721
            MG ASS + +  +E         F ++EI  L +RF +LD++  G I  +EFL++P  + NPL+ RL+ + D      ++F++F+  LS FS K S   K++  FK+YD D +G +   ++  V++ + G  + DE+ +Q++
Sbjct:    1 MGVASSKILENLMEGTN------FDKEEIERLRKRFMKLDKDGSGTIDKNEFLTIPGISSNPLAARLMDVFDEDGNGTIDFQEFIMGLSAFSGKTSKLDKLKFAFKIYDIDRDGYIGNGELFIVMKMMVGKNLQDEELQQIV 136          
BLAST of DR406173 vs. ExPASy Swiss-Prot
Match: CANB1_RAT (Calcineurin subunit B type 1 OS=Rattus norvegicus GN=Ppp3r1 PE=1 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 5.346e-16
Identity = 42/119 (35.29%), Postives = 74/119 (62.18%), Query Frame = 2
Query:  380 FSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDG-----LNFKDFVAFLSVFSAKASMQQKVQLIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVL 721
            F   EI  L +RF +LD +  G +S +EF+S+PE   NPL QR++ + D      ++FK+F+  +S FS K   +QK++  F++YD D +G +S  ++ +VL+ + G+ + D Q +Q++
Sbjct:   15 FDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIV 133          
BLAST of DR406173 vs. ExPASy Swiss-Prot
Match: CANB1_MOUSE (Calcineurin subunit B type 1 OS=Mus musculus GN=Ppp3r1 PE=1 SV=3)

HSP 1 Score: 84.7297 bits (208), Expect = 5.346e-16
Identity = 42/119 (35.29%), Postives = 74/119 (62.18%), Query Frame = 2
Query:  380 FSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDG-----LNFKDFVAFLSVFSAKASMQQKVQLIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVL 721
            F   EI  L +RF +LD +  G +S +EF+S+PE   NPL QR++ + D      ++FK+F+  +S FS K   +QK++  F++YD D +G +S  ++ +VL+ + G+ + D Q +Q++
Sbjct:   15 FDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIV 133          
BLAST of DR406173 vs. ExPASy Swiss-Prot
Match: CANB1_HUMAN (Calcineurin subunit B type 1 OS=Homo sapiens GN=PPP3R1 PE=1 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 5.346e-16
Identity = 42/119 (35.29%), Postives = 74/119 (62.18%), Query Frame = 2
Query:  380 FSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDG-----LNFKDFVAFLSVFSAKASMQQKVQLIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVL 721
            F   EI  L +RF +LD +  G +S +EF+S+PE   NPL QR++ + D      ++FK+F+  +S FS K   +QK++  F++YD D +G +S  ++ +VL+ + G+ + D Q +Q++
Sbjct:   15 FDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIV 133          
BLAST of DR406173 vs. ExPASy Swiss-Prot
Match: CANB1_BOVIN (Calcineurin subunit B type 1 OS=Bos taurus GN=PPP3R1 PE=1 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 5.346e-16
Identity = 42/119 (35.29%), Postives = 74/119 (62.18%), Query Frame = 2
Query:  380 FSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDG-----LNFKDFVAFLSVFSAKASMQQKVQLIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVL 721
            F   EI  L +RF +LD +  G +S +EF+S+PE   NPL QR++ + D      ++FK+F+  +S FS K   +QK++  F++YD D +G +S  ++ +VL+ + G+ + D Q +Q++
Sbjct:   15 FDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIV 133          
BLAST of DR406173 vs. ExPASy Swiss-Prot
Match: CANB2_DROME (Calcineurin subunit B type 2 OS=Drosophila melanogaster GN=CanB2 PE=1 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 9.118e-16
Identity = 44/123 (35.77%), Postives = 74/123 (60.16%), Query Frame = 2
Query:  368 CHNLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDG-----LNFKDFVAFLSVFSAKASMQQKVQLIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVL 721
            C N F   EI  L +RF +LD +  G +S DEF+S+PE   NPL QR++ + D      ++FK+F+  +S FS K     K++  F++YD D +G +S  ++ +VL+ + G+ + D Q +Q++
Sbjct:   12 CSN-FDADEIRRLGKRFRKLDLDNSGALSVDEFMSLPELQQNPLVQRVIDIFDADGNGEVDFKEFIQGVSQFSVKGDKLSKLRFAFRIYDMDNDGYISNGELFQVLKMMVGNNLKDTQLQQIV 133          
BLAST of DR406173 vs. ExPASy Swiss-Prot
Match: CANB1_DROME (Calcineurin subunit B type 1 OS=Drosophila melanogaster GN=CanB PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.653e-15
Identity = 43/123 (34.96%), Postives = 74/123 (60.16%), Query Frame = 2
Query:  368 CHNLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDG-----LNFKDFVAFLSVFSAKASMQQKVQLIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVL 721
            C N F   EI  L +RF +LD +  G +S DEF+S+PE   NPL QR++ + D      ++FK+F+  +S FS +     K++  F++YD D +G +S  ++ +VL+ + G+ + D Q +Q++
Sbjct:   12 CSN-FDADEIRRLGKRFRKLDLDNSGALSIDEFMSLPELQQNPLVQRVIDIFDADGNGEVDFKEFIQGVSQFSVRGDKLSKLRFAFRIYDMDNDGYISNGELFQVLKMMVGNNLKDTQLQQIV 133          
BLAST of DR406173 vs. ExPASy Swiss-Prot
Match: CANB2_HUMAN (Calcineurin subunit B type 2 OS=Homo sapiens GN=PPP3R2 PE=2 SV=3)

HSP 1 Score: 80.1073 bits (196), Expect = 1.317e-14
Identity = 41/119 (34.45%), Postives = 73/119 (61.34%), Query Frame = 2
Query:  380 FSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDG-----LNFKDFVAFLSVFSAKASMQQKVQLIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVL 721
            F   EI  L +RF +LD +  G +S +EF+S+PE   NPL +R++ + D      ++FK+F+   S FS K   +QK++  F +YD D +G +S  ++ +VL+ + G+ ++D Q +Q++
Sbjct:   15 FDNDEIKRLGRRFKKLDLDKSGSLSVEEFMSLPELRHNPLVRRVIDVFDTDGDGEVDFKEFILGTSQFSVKGDEEQKLRFAFSIYDMDKDGYISNGELFQVLKMMVGNNLTDWQLQQLV 133          
BLAST of DR406173 vs. ExPASy Swiss-Prot
Match: CHP1_CHICK (Calcium-binding protein p22 OS=Gallus gallus GN=CHP PE=2 SV=3)

HSP 1 Score: 77.7962 bits (190), Expect = 6.534e-14
Identity = 48/149 (32.21%), Postives = 78/149 (52.35%), Query Frame = 2
Query:  320 ASSMLTQYDIEEVQQHCHNLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMV-----DGLNFKDFVAFLSVF---------------SAKASMQQKVQLIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQ 706
            AS++L   +IEE+++     FS  +I  LY RF  LD+   G +S ++F  +PE A+NPL  R++        D +NF+ F+  L+ F                   S   K+   F++YD D + K+S +++L+VLR + G  +SDEQ
Sbjct:    5 ASTLLRDEEIEEIKKETG--FSHSQITRLYSRFTSLDKGENGTLSREDFQRIPELAINPLGDRIINAFFSEGEDQVNFRGFMRTLAHFRPIEDNEKSKDQNGPEPLNSRSNKLHFAFRLYDLDKDDKISRDELLQVLRMMVGVNISDEQ 151          
The following BLAST results are available for this feature:
BLAST of DR406173 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
CANB_KLULA5.346e-1630.28Calcineurin subunit B OS=Kluyveromyces lactis GN=C... [more]
CANB_DEBHA5.346e-1632.39Calcineurin subunit B OS=Debaryomyces hansenii GN=... [more]
CANB1_RAT5.346e-1635.29Calcineurin subunit B type 1 OS=Rattus norvegicus ... [more]
CANB1_MOUSE5.346e-1635.29Calcineurin subunit B type 1 OS=Mus musculus GN=Pp... [more]
CANB1_HUMAN5.346e-1635.29Calcineurin subunit B type 1 OS=Homo sapiens GN=PP... [more]
CANB1_BOVIN5.346e-1635.29Calcineurin subunit B type 1 OS=Bos taurus GN=PPP3... [more]
CANB2_DROME9.118e-1635.77Calcineurin subunit B type 2 OS=Drosophila melanog... [more]
CANB1_DROME2.653e-1534.96Calcineurin subunit B type 1 OS=Drosophila melanog... [more]
CANB2_HUMAN1.317e-1434.45Calcineurin subunit B type 2 OS=Homo sapiens GN=PP... [more]
CHP1_CHICK6.534e-1432.21Calcium-binding protein p22 OS=Gallus gallus GN=CH... [more]

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Properties
Property NameValue
Genbank descriptionCSAJ-PNP1248P13 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone CSAJ-PNP1248P13 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR406173 ID=DR406173; Name=DR406173; organism=Citrus sinensis; type=EST; length=721bp
GGGGACGAGGAATATCCCACGCAATTCTCCGAAAATCAACGGCCGATAAA
ACGACGAAACATAAAAAAGAATGTTACTGCGTGACAGAGAATAATCGGTG
ATGAGGATGAACATCAGATTCCTCGTCATCTAGTACAAACAAAATACTAT
TCTGTGTGTTTTCAATGGCTCGATGATGACGAAGGAGTTTCTGTCATCTA
TATTTCCCGATACTTCATCTTCATCTAAACTCATCTCCTAGCGGTCGGTT
CTTTTTTTCCTACATTTTCTGTTTGTTTCCCGAGAAAACCCAGTTTTGGA
GCGAGAATCAATGGGGACTGCCTCGTCTATGCTAACTCAATATGATATTG
AAGAGGTTCAACAGCACTGCCACAATCTATTTTCTCAACAAGAAATAGTG
TCGTTGTACCAAAGGTTTTGCCAGCTAGATAGAAATGCCAAGGGATTCAT
CTCTGCAGATGAGTTCTTGTCGGTGCCTGAATTTGCAATGAATCCACTTT
CTCAGAGGTTGCTAAAGATGGTGGATGGGTTGAACTTCAAGGATTTTGTG
GCCTTCTTGTCTGTTTTCAGTGCTAAGGCAAGCATGCAGCAGAAAGTTCA
GCTTATTTTCAAAGTGTACGACTCAGACTGTAATGGAAAGGTTTCTTTCA
ATGACATATTGGAAGTGCTGCGGGATTTGTCTGGTTCTTTTATGTCCGAT
GAGCAAAGAGAGCAAGTCTTG
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