DR406162

Overview
NameDR406162
Unique NameDR406162
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length749
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8502 contig Csv1_Contig8502:412..1160. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR406162 vs. ExPASy Swiss-Prot
Match: IOLC_BACAH (5-dehydro-2-deoxygluconokinase OS=Bacillus thuringiensis (strain Al Hakam) GN=iolC PE=3 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 2.406e-14
Identity = 63/252 (25.00%), Postives = 116/252 (46.03%), Query Frame = 1
Query:    4 GILKENGVSADGINFD-QGARTALAFVTLRADGEREFMFYRNPSADMLLRPDELNLELIRSAKVFHYGSISLIVEPCRSAHLEAMKAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVE---LEFLTGSDKIDDESALSLWHPN-LKLLLVTLGEHGCRYYTK---SFRGAVDAFHVNAVDTTGAGDAFVGTLLGKLVDDQSVLEDEPRLREILKFANACGAITTTKKGAIPALPTESE 735
            G LK+N ++ D I+ D  GA T LAF  +++  +   + YR+  AD+ L P E++ + I+ +K       +L   P R A   A++ A +   ++ +D + R   W S  E         +K++VI  +  E   +E L   ++ +D+     W  +  K++++  G  G   YT+   S RG +  F    + T GAGD++    +  L+    +        + ++   A  +I  +K     A+PT +E
Sbjct:   78 GYLKDNKINTDQIHIDCTGAVTGLAFTEIKSPEDCSILMYRDNVADLNLDPTEVSEDYIKQSKALLISGTALAKSPSREAVFLALEYAHKHDVVVFFDVDYRPYTWQSEAETAVYYNLAAEKSDVIIGTREEFDMMEKLLNYEQSNDQVTAERWFSHYAKIVVIKHGGDGSIAYTRDGQSHRGGI--FKTKVLKTFGAGDSYASAFIYGLMQGLEI-------PQAMRLGGASASIVISKHSCSDAMPTRAE 320          
BLAST of DR406162 vs. ExPASy Swiss-Prot
Match: IOLC_BACA2 (5-dehydro-2-deoxygluconokinase OS=Bacillus amyloliquefaciens (strain FZB42) GN=iolC PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.001e-14
Identity = 60/249 (24.10%), Postives = 114/249 (45.78%), Query Frame = 1
Query:   10 LKENGVSADGINFD-QGARTALAFVTLRADGEREFMFYRNPSADMLLRPDELNLELIRSAKVFHYGSISLIVEPCRSAHLEAMKAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTG-SDKIDDESALSLWHPNLKLLLVTLGEHGCRYYTKS---FRGAVDAFHVNAVDTTGAGDAFVGTLLGKLVDDQSVLEDEPRLREILKFANACGAITTTKKGAIPALPTESEAL 741
            ++  GV    +  D +G +  LAF  + +  E   + YR+  AD+ L P E+N   I +AK+      +L   P R A L+A+  AK+    + ++ + R   W S EE       + ++++++  +  E + +   S   +DE+   L+  +  L+++  G  G   Y++S   FR    A+    + T GAGD++    +  LV  + +          LK+ +A  +I  +K  +  A+P   E +
Sbjct:   79 MQGKGVDTSQMTVDREGRKAGLAFTEILSPEECSILMYRDDVADLYLEPSEVNEGYIANAKMLLVSGTALAKSPSREAVLKAVHIAKKHDVKVVFELDYRPYTWQSAEETAVYYTLVAEQSDIVIGTRDEFDVMENRSGGGNDETVRHLFAHSADLVVIKHGVDGSYAYSRSGEVFR--AHAYKTKVLKTFGAGDSYASAFIYGLVSGRDI-------ETALKYGSASASIVVSKHSSSEAMPAAGEII 318          
BLAST of DR406162 vs. ExPASy Swiss-Prot
Match: IOLC_PHOPR (5-dehydro-2-deoxygluconokinase OS=Photobacterium profundum GN=iolC PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 9.144e-14
Identity = 61/254 (24.02%), Postives = 118/254 (46.46%), Query Frame = 1
Query:    4 GILKENGVSADGINFDQ-GARTALAFVTLRADGEREFMFYRNPSADMLLRPDELNLELIRSAKVFHYGSISLIVEPCRSAHLEAMKAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEF----LTGSDKIDDESALSLWHPNLKLLLVTLGEHGCRYYTK-SFRGAVDAFHVNAVDTTGAGDAFVGTLLGKLVDDQSVLEDEPRLREILKFANACGAITTTKKGAIPALPTESEALNY 747
            G + E G++ DG+  D  G+RT++AF  ++ + +   + YRN ++D+ L+P++++   I  +K+      +L   P R A L AM+ A+ +  ++  D + R   W +  +A          ++++  +  E +     L   +  DD +A      N ++++V  GE G + Y K   +     F V      G+GD+F G L+  LV+          L + +K  +A  AI  +      A+PT+    ++
Sbjct:   78 GYMTEQGINLDGMMTDNSGSRTSVAFTEMKPN-DCTVLIYRNKASDLTLKPEQVDPAYIAQSKMLVVTGTALSESPSREATLIAMEHARRSNTVVVLDVDYRPYSWRTDVDASIYYGIAAGLSDIVIGNREEFDMMETVLAPGNTDDDATADRFLRANTQVVIVKAGELGSKVYCKDGHKFQQGIFRVEVKKPFGSGDSFAGGLIWTLVNG-------GELEDGVKHGSAAAAINVSGNSCTEAMPTKEVLFDF 323          
BLAST of DR406162 vs. ExPASy Swiss-Prot
Match: IOLC_CLOPE (5-dehydro-2-deoxygluconokinase OS=Clostridium perfringens GN=iolC PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 9.144e-14
Identity = 54/243 (22.22%), Postives = 110/243 (45.27%), Query Frame = 1
Query:   13 KENGVSADGIN-FDQGARTALAFVTLRADGEREFMFYRNPSADMLLRPDELNLELIRSAKVFHYGSISLIVEPCRSAHLEAMKAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTG---SDKIDDESALSLWHPNLKLLLVTLGEHGCRYYTKSFRG-AVDAFHVNAVDTTGAGDAFVGTLLGKLVDDQSVLEDEPRLREILKFANACGAITTTKKGAIPALPT 726
            K+ G+    I+    G    L F  + +  E   + YRN  AD+ L  D+++ + I++ K       +L + P R A L+A++ AK+ G ++ +D + R   W + +E       +  ++++I  S  E + + G    D  D+E+A        K++++  G+ G   YT+  +   +  F V  + + G GDA+    +  +++   ++       + L+F +A  A+          +PT
Sbjct:   81 KKEGIDVSEISKAKNGESLGLTFTEILSPTESSILMYRNGIADLQLDVDDIDEDYIKNTKAIVISGTALAMSPSREAALKALRLAKKNGTVVIFDVDYREYNWKNKDEIAIYYSIVGKESDIIMGSREEFDLMEGLIAKDSTDEETAKRWLDYGNKIVVIKHGKDGSTAYTRDGKAYRIKPFPVKLLKSFGGGDAYASAFIYGILEGWDMM-------DALEFGSASAAMLVASHSCSEDMPT 316          
BLAST of DR406162 vs. ExPASy Swiss-Prot
Match: IOLC_CLOP1 (5-dehydro-2-deoxygluconokinase OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=iolC PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 9.144e-14
Identity = 54/243 (22.22%), Postives = 110/243 (45.27%), Query Frame = 1
Query:   13 KENGVSADGIN-FDQGARTALAFVTLRADGEREFMFYRNPSADMLLRPDELNLELIRSAKVFHYGSISLIVEPCRSAHLEAMKAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTG---SDKIDDESALSLWHPNLKLLLVTLGEHGCRYYTKSFRG-AVDAFHVNAVDTTGAGDAFVGTLLGKLVDDQSVLEDEPRLREILKFANACGAITTTKKGAIPALPT 726
            K+ G+    I+    G    L F  + +  E   + YRN  AD+ L  D+++ + I++ K       +L + P R A L+A++ AK+ G ++ +D + R   W + +E       +  ++++I  S  E + + G    D  D+E+A        K++++  G+ G   YT+  +   +  F V  + + G GDA+    +  +++   ++       + L+F +A  A+          +PT
Sbjct:   81 KKEGIDVSEISKAKNGESLGLTFTEILSPTESSILMYRNGIADLQLDVDDIDEDYIKNTKAIVISGTALAMSPSREAALKALRLAKKNGTVVIFDVDYREYNWKNKDEIAIYYSIVGKESDIIMGSREEFDLMEGLIAKDSTDEETAKRWLDYGNKIVVIKHGKDGSTAYTRDGKAYRIKPFPVKLLKSFGGGDAYASAFIYGILEGWDMM-------DALEFGSASAAMLVASHSCSEDMPT 316          
BLAST of DR406162 vs. ExPASy Swiss-Prot
Match: IOLC2_BACCZ (5-dehydro-2-deoxygluconokinase 2 OS=Bacillus cereus (strain ZK / E33L) GN=iolC2 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.194e-13
Identity = 61/250 (24.40%), Postives = 116/250 (46.40%), Query Frame = 1
Query:   10 LKENGVSADGINFDQ-GARTALAFVTLRADGEREFMFYRNPSADMLLRPDELNLELIRSAKVFHYGSISLIVEPCRSAHLEAMKAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVE---LEFLTGSDKIDDESALSLWHP-NLKLLLVTLGEHGCRYYTK---SFRGAVDAFHVNAVDTTGAGDAFVGTLLGKLVDDQSVLEDEPRLREILKFANACGAITTTKKGAIPALPTESE 735
            L++N ++ D I  D+ GA T LAF  +++  +   + YR+  AD+ L P E++ + I+ +K       +L   P R A   A++ A++   ++ +D + R   W S  E         +K++VI  +  E   +E L   ++ +D+     W   + K++++  G  G   YT+   S RG +  F    + T GAGD++    +  L+    +        + ++   A  +I  +K     A+PT +E
Sbjct:   80 LQDNNINTDQICIDRTGAVTGLAFTEIKSPEDCSILMYRDNVADLNLDPTEVSEDYIKQSKALLISGTALAKSPSREAVFLALEYARKHDVVVFFDVDYRPYTWQSEAETAVYYNLAAEKSDVIIGTREEFDMMEKLLNYEESNDQVTAERWFSHHAKIVVIKHGGDGSIAYTRDGQSHRGGI--FKTKVLKTFGAGDSYASAFIYGLMQGLEI-------PQAMRLGGASASIVISKHSCSDAMPTRAE 320          
BLAST of DR406162 vs. ExPASy Swiss-Prot
Match: IOLC_LACCA (5-dehydro-2-deoxygluconokinase OS=Lactobacillus casei GN=iolC PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.538e-13
Identity = 56/227 (24.67%), Postives = 99/227 (43.61%), Query Frame = 1
Query:   49 DQGARTALAFVTLRADGEREFMFYRNPSADMLLRPDELNLELIRSAKVFHYGSISLIVEPCRSAHLEAMKAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTG-SDKIDDESALSLWHPNLKLLLVTLGEHGCRYYTKSFRG-AVDAFHVNAVDTTGAGDAFVGTLLGKLVDDQSVLEDEPRLREILKFANACGAITTTKKGAIPALP 723
            D G +  L F  + +  E + + YRN +AD+ L   E++   +   K+       L   P R A L+A+  AKE G  + ++ + R   W + EE       +  KA+VI  +  E + L     + D E+  +L+  +  L+++  G  G   YTK+        F    + + GAGD+F    L          + +  L   LK+ +A  +I  ++  +  A+P
Sbjct:   87 DTGHKIGLTFTEIISPEESDILMYRNEAADLYLNAHEVSRAYLAQTKMLVISGTGLAQSPSREAILKALLIAKELGVEVIFELDYRPYTWQNAEETSLYYQLVAQKADVIIGTRDEFDVLENHQGRTDQETIATLFQYDANLIVIKSGIQGSNAYTKAGETYHFGVFKTKVLKSFGAGDSFAAGFL-------YAYQHQLGLETALKYGSAAASIVISQLSSSEAMP 306          
BLAST of DR406162 vs. ExPASy Swiss-Prot
Match: RBSK_ECOLI (Ribokinase OS=Escherichia coli (strain K12) GN=rbsK PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.741e-13
Identity = 68/246 (27.64%), Postives = 111/246 (45.12%), Query Frame = 1
Query:   10 LKENGVSADGINFDQGARTALAFVTLRADGEREFMFYRNPSADMLLRPDELNLELIRSAKVFHYGSISLIVEPCRSAHLEAMKAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESALS----LWHPNLKLLLVTLGEHGCRYYTKSFRGAVDAFHVNAVDTTGAGDAFVGTLLGKLVDDQSVLEDEPRLREILKFANACGAITTTKKGAIPALPTESE 735
            L  + +    ++  +G  T +A + +  +GE     +   +A +     E   E I +A        +L+++      LE+   +  A A +++     + L P+P  ARE    +    ++I  ++ E E LTG    +DE A      L    ++ +L+TLG  G           V  F V AVDT  AGD F G L+  L      LE++P L E ++FA+A  AI  T+KGA P++P   E
Sbjct:   77 LATDNIDITPVSVIKGESTGVALIFVNGEGENVIGIHAGANAALSPALVEAQRERIANAS-------ALLMQ------LESPLESVMAAAKIAHQNKTIVALNPAP--ARELPDELLALVDIITPNETEAEKLTGIRVENDEDAAKAAQVLHEKGIRTVLITLGSRGVWASVNGEGQRVPGFRVQAVDTIAAGDTFNGALITAL------LEEKP-LPEAIRFAHAAAAIAVTRKGAQPSVPWREE 300          
BLAST of DR406162 vs. ExPASy Swiss-Prot
Match: RBSK_ECO57 (Ribokinase OS=Escherichia coli O157:H7 GN=rbsK PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.741e-13
Identity = 68/246 (27.64%), Postives = 111/246 (45.12%), Query Frame = 1
Query:   10 LKENGVSADGINFDQGARTALAFVTLRADGEREFMFYRNPSADMLLRPDELNLELIRSAKVFHYGSISLIVEPCRSAHLEAMKAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESALS----LWHPNLKLLLVTLGEHGCRYYTKSFRGAVDAFHVNAVDTTGAGDAFVGTLLGKLVDDQSVLEDEPRLREILKFANACGAITTTKKGAIPALPTESE 735
            L  + +    ++  +G  T +A + +  +GE     +   +A +     E   E I +A        +L+++      LE+   +  A A +++     + L P+P  ARE    +    ++I  ++ E E LTG    +DE A      L    ++ +L+TLG  G           V  F V AVDT  AGD F G L+  L      LE++P L E ++FA+A  AI  T+KGA P++P   E
Sbjct:   77 LATDNIDITPVSVIKGESTGVALIFVNGEGENVIGIHAGANAALSPALVEAQRERIANAS-------ALLMQ------LESPLESVMAAAKIAHQNKTIVALNPAP--ARELPDELLALVDIITPNETEAEKLTGIRVENDEDAAKAAQVLHEKGIRTVLITLGSRGVWASVNGEGQRVPGFRVQAVDTIAAGDTFNGALITAL------LEEKP-LPEAIRFAHAAAAIAVTRKGAQPSVPWREE 300          
BLAST of DR406162 vs. ExPASy Swiss-Prot
Match: IOLC_CLOB8 (5-dehydro-2-deoxygluconokinase OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=iolC PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.741e-13
Identity = 58/248 (23.39%), Postives = 105/248 (42.34%), Query Frame = 1
Query:   22 GVSADGINFDQ-GARTALAFVTLRADGEREFMFYRNPSADMLLRPDELNLELIRSAKVFHYGSISLIVEPCRSAHLEAMKAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVE---LEFLTGSDKIDDESALSLW-HPNLKLLLVTLGEHGCRYYTKSFRG-AVDAFHVNAVDTTGAGDAFVGTLLGKLVDDQSVLEDEPRLREILKFANACGAITTTKKGAIPALPTESEALNY 747
            G+    I + + G    L F  + +  E   + YR   AD+ L  DE++ E I++ K       +L   P R A L+A++ AK    ++ +D + R   W + +E          ++++I  S  E   +E L   +K  DE     W     K++++  G+ G   YT   +   +  F V  + + G GDA+    L  L++  S+++        L+F +A  A+          +PT     N+
Sbjct:   84 GIDTSQIKYSKNGENLGLTFTEIASPTESSILMYRQGIADLELNVDEIDEEYIKNTKAIVISGTALAKSPSREAALKALELAKRNNTVVIFDVDYRAYNWKNSDEIAIYYSIAGKQSDIIMGSREEFDLMEKLITREKNSDEETAKRWLDYGNKIVVIKHGKEGSTAYTSDGKSYNIKPFPVKLLKSFGGGDAYASAFLYGLLEGWSIIDS-------LEFGSASAAMLVASHSCSQDMPTVEAIRNF 324          
The following BLAST results are available for this feature:
BLAST of DR406162 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
IOLC_BACAH2.406e-1425.005-dehydro-2-deoxygluconokinase OS=Bacillus thuring... [more]
IOLC_BACA27.001e-1424.105-dehydro-2-deoxygluconokinase OS=Bacillus amyloli... [more]
IOLC_PHOPR9.144e-1424.025-dehydro-2-deoxygluconokinase OS=Photobacterium p... [more]
IOLC_CLOPE9.144e-1422.225-dehydro-2-deoxygluconokinase OS=Clostridium perf... [more]
IOLC_CLOP19.144e-1422.225-dehydro-2-deoxygluconokinase OS=Clostridium perf... [more]
IOLC2_BACCZ1.194e-1324.405-dehydro-2-deoxygluconokinase 2 OS=Bacillus cereu... [more]
IOLC_LACCA4.538e-1324.675-dehydro-2-deoxygluconokinase OS=Lactobacillus ca... [more]
RBSK_ECOLI7.741e-1327.64Ribokinase OS=Escherichia coli (strain K12) GN=rbs... [more]
RBSK_ECO577.741e-1327.64Ribokinase OS=Escherichia coli O157:H7 GN=rbsK PE=... [more]
IOLC_CLOB87.741e-1323.395-dehydro-2-deoxygluconokinase OS=Clostridium beij... [more]

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Properties
Property NameValue
Genbank descriptionCSAJ-PNP1248O19 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone CSAJ-PNP1248O19 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR406162 ID=DR406162; Name=DR406162; organism=Citrus sinensis; type=EST; length=749bp
GGGGGGATCTTGAAGGAGAACGGAGTCAGCGCTGACGGCATCAACTTTGA
CCAGGGTGCCAGAACTGCCCTTGCATTCGTGACCCTGCGGGCTGACGGCG
AGCGCGAGTTCATGTTTTACAGAAACCCCAGCGCTGATATGCTCTTGAGA
CCCGACGAGCTTAATCTTGAGCTGATCAGATCTGCCAAAGTTTTCCACTA
TGGGTCAATAAGCCTGATAGTGGAGCCATGCCGATCAGCGCACTTGGAGG
CAATGAAAGCAGCCAAGGAAGCAGGAGCCCTTCTCTCATACGACCCCAAC
CTCCGGCTACCGTTGTGGCCCTCGCCGGAGGAGGCGCGCGAGCAGATAAT
GAGCATCTGGGACAAGGCCGAGGTAATCAAAGTCAGTGATGTGGAGCTTG
AATTCCTCACCGGGAGTGACAAGATTGATGATGAATCAGCATTGTCGCTT
TGGCATCCCAACTTGAAACTCCTTTTGGTCACCCTTGGTGAGCATGGCTG
CAGATACTACACCAAGAGTTTCAGAGGAGCAGTGGATGCTTTTCATGTGA
ACGCAGTAGATACAACCGGCGCTGGTGATGCATTTGTTGGTACTCTTTTA
GGGAAGCTTGTTGATGACCAATCTGTTCTTGAGGATGAACCAAGGTTGCG
GGAGATATTGAAATTTGCAAATGCCTGTGGAGCCATCACTACCACCAAGA
AGGGAGCAATTCCAGCTCTACCCACAGAGTCTGAAGCTCTCAACTACTC
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